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The map label for this gene is 126442997

Identifier: 126442997

GI number: 126442997

Start: 229206

End: 229592

Strand: Reverse

Name: 126442997

Synonym: BURPS668_A0260

Alternate gene names: NA

Gene position: 229592-229206 (Counterclockwise)

Preceding gene: 126444154

Following gene: 126444579

Centisome position: 7.34

GC content: 51.94

Gene sequence:

>387_bases
ATGGGATCTTTAAATTACGCTTCAGCAATATCGAATCCATTCAATGACATACCTGGCCAATCGAATATCGCATTAGATCG
GCCAATTTCCGGCATGAACAGTTATCAGGAATACAAGCAACACGTCAAAACGCTTCAGGCAACGCTGGACCGGGAACGCA
AGGCGATTTCAGCCAAGGTGCTCCAGGAGATTCGCGAATGCATCGCGGAATTCGGCTTCACGCCTCAAGAGGTGTTTTCT
TCGAAGAAGAAGCGCGAACCGAAGTACTACGATCCGGTCAGCGGCTCGACATGGACCGGGCTCGGCCGAGAGCCGGAATG
GATACGCGGAAAAGACAGGAAGGCTTTCGAACTGTCGAGCCATCAGCGCGACGATCATTGCCGATGA

Upstream 100 bases:

>100_bases
TCGTGGTTGCGCGATGCCCGAGGACAGGCATGGGCCGGCGCTTTGGCTCCGACAATCTCGATTTAAAGTCCGCTTAATCC
ATACTTGTCCCATTACAAAT

Downstream 100 bases:

>100_bases
TATTGCGGGGCTGAACCGCCCGCGCCACGCGCGACGATCGGCACGGGACGCGATTGCACGGCGCGACGCATTCGGTCGGA
GGGCACACGTCAGGATGGCT

Product: H-NS histone family protein

Products: NA

Alternate protein names: H-NS Histone Family Protein; Histone-Like Nucleoid-Structuring Protein H-NS; Regulatory Protein; Histone Family Protein Nucleoid-Structuring Protein H-Ns

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MGSLNYASAISNPFNDIPGQSNIALDRPISGMNSYQEYKQHVKTLQATLDRERKAISAKVLQEIRECIAEFGFTPQEVFS
SKKKREPKYYDPVSGSTWTGLGREPEWIRGKDRKAFELSSHQRDDHCR

Sequences:

>Translated_128_residues
MGSLNYASAISNPFNDIPGQSNIALDRPISGMNSYQEYKQHVKTLQATLDRERKAISAKVLQEIRECIAEFGFTPQEVFS
SKKKREPKYYDPVSGSTWTGLGREPEWIRGKDRKAFELSSHQRDDHCR
>Mature_127_residues
GSLNYASAISNPFNDIPGQSNIALDRPISGMNSYQEYKQHVKTLQATLDRERKAISAKVLQEIRECIAEFGFTPQEVFSS
KKKREPKYYDPVSGSTWTGLGREPEWIRGKDRKAFELSSHQRDDHCR

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14667; Mature: 14535

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLNYASAISNPFNDIPGQSNIALDRPISGMNSYQEYKQHVKTLQATLDRERKAISAKV
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEIRECIAEFGFTPQEVFSSKKKREPKYYDPVSGSTWTGLGREPEWIRGKDRKAFELSS
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCC
HQRDDHCR
CCCCCCCC
>Mature Secondary Structure 
GSLNYASAISNPFNDIPGQSNIALDRPISGMNSYQEYKQHVKTLQATLDRERKAISAKV
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEIRECIAEFGFTPQEVFSSKKKREPKYYDPVSGSTWTGLGREPEWIRGKDRKAFELSS
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCC
HQRDDHCR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA