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The map label for this gene is yhiR [C]

Identifier: 126442991

GI number: 126442991

Start: 565389

End: 566234

Strand: Reverse

Name: yhiR [C]

Synonym: BURPS668_A0599

Alternate gene names: 126442991

Gene position: 566234-565389 (Counterclockwise)

Preceding gene: 126443919

Following gene: 126444998

Centisome position: 18.11

GC content: 59.69

Gene sequence:

>846_bases
ATGCTCAGCTATCGTCACGGCTTTCACGCCGGCAATCACGCGGACGTCCTCAAGCACACCGTCGTCGTGCAGTTGCTGCG
TTATTTGAACAAGAAAGACAAGTCGTATTGGTACATCGACACGCACGCGGGCGCAGGCGTCTATTCGCTCTTCGACGGCT
ATGCGGCGAAAACCGGTGAATTCGGCACGGGGATCGAGAAAATCTGGGATGCAACGGATCTGCCCGAAGCACTGTCCGAC
TATGTCGACGAAGTGCGCGCGCTGAACCGCGACGGCGAATTGCGCTACTACCCGGGCTCGCCTTATCTTGCGTGGCGACT
GATGCGAGAACAGGACCGGATGCGTCTGTTCGAGCTTCACAGTACCGAAATCGATGTGCTGCGCCACAATTTCCGCGATG
CGGGGCGGCGCGCGATGATTTACGCCGGCGACGGCTTCGAAGGCATCAAGGCGCTGCTGCCGCCGCCGCCGCGGCGCGCG
CTCGTGTTGGTGGATCCGTCATACGAGGACAAGCGCGATTACGCGAAAACGATCGCCTGCGTCGAAGAAAGCCTGAAGCG
ATTCGCGACGGGGTGCTATGCAATCTGGTATCCGCAGGTGAGCCGGCCCGAATCGCAGAAATTCCCCGACCATCTGAAGC
AGTTGCAGCCGAACAACTGGCTGCATCTGAGCTTGACCGTGAGCCGGCCGCCATCGGACGGCTTTGGTCTTTTCGGCAGC
GGGATGTTCATTCTCAACCCGCCGTATACGTTGGTCGATACGATGAAAGAGGCACTCCCCTATCTCGTCGAAGTGCTTGG
CCAGGACAGCGGCGCGAAATTCGCGATCGAGCACCGCGCCAACTGA

Upstream 100 bases:

>100_bases
GCCGCGTCGGTCGGCCATGTCCACGAGTCGGCATCGCCGCATGAGTCACGCCCCCGACGCCCGGCCGACTTTCACGTACC
GCTTCCGTATTTCTCTCGCC

Downstream 100 bases:

>100_bases
CCGGGGCGCCGCTTATTGACGCGGCGGGGGCGCTTTGAGCGGAACCGCGGAGCCCGGCACTTCGATATACGGGATGACGA
CCATCGGCGCAGTGGAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGEFGTGIEKIWDATDLPEALSD
YVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELHSTEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRA
LVLVDPSYEDKRDYAKTIACVEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
GMFILNPPYTLVDTMKEALPYLVEVLGQDSGAKFAIEHRAN

Sequences:

>Translated_281_residues
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGEFGTGIEKIWDATDLPEALSD
YVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELHSTEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRA
LVLVDPSYEDKRDYAKTIACVEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
GMFILNPPYTLVDTMKEALPYLVEVLGQDSGAKFAIEHRAN
>Mature_281_residues
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGEFGTGIEKIWDATDLPEALSD
YVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELHSTEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRA
LVLVDPSYEDKRDYAKTIACVEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
GMFILNPPYTLVDTMKEALPYLVEVLGQDSGAKFAIEHRAN

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=262, Percent_Identity=48.0916030534351, Blast_Score=250, Evalue=9e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32078; Mature: 32078

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCHHCCCCC
FGTGIEKIWDATDLPEALSDYVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELH
CCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
STEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRALVLVDPSYEDKRDYAKTIAC
CCHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHH
VEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
HHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCC
GMFILNPPYTLVDTMKEALPYLVEVLGQDSGAKFAIEHRAN
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCHHCCCCC
FGTGIEKIWDATDLPEALSDYVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELH
CCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
STEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRALVLVDPSYEDKRDYAKTIAC
CCHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHH
VEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
HHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCC
GMFILNPPYTLVDTMKEALPYLVEVLGQDSGAKFAIEHRAN
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]