Click here to switch to the map view.

The map label for this gene is ycjY [C]

Identifier: 126442989

GI number: 126442989

Start: 1566402

End: 1568105

Strand: Reverse

Name: ycjY [C]

Synonym: BURPS668_A1638

Alternate gene names: 126442989

Gene position: 1568105-1566402 (Counterclockwise)

Preceding gene: 126445398

Following gene: 126442915

Centisome position: 50.14

GC content: 68.08

Gene sequence:

>1704_bases
TTGGTCACGGGCGCGAGCGTCGCGCTTGCCGCATCGTTCGCTCACGCGGGCGTGTCCTGCCGGCCGGCGACGCCCGCCGA
GGCGGCCGTCTACACGTCGCCGTTCCAGTTTCCCGGCGTGAGCTCGCCGAAGGACGGCACCTGCTGGGTCAACAACCAGA
CCGTCGTCGCGACGGACGGCACGCGGCTCACCGCGAACGTGTTCCTGCCGAAGATCACGAGCCCCGATCAGAAGTTTCCG
ACGATCGTGATGATCTCGAGCTGGGCCGCGGCCGATTTCTTCGAATATCTCGGCCAGCAGCGCAAGCTCGCGCAGGACGG
CTACATCGTGCTCGCGTACACCGCGCGCGGCTTCTATCTGTCGGGCGGGCAGGTCGAGGTGGCGGGCCCGCAGGACGTGA
AGGACGTGTCGTCCGCCGTCGACTGGGTGTCCGCGAACACGCCCGCCGATCCGGACCGGCTCGCGGTGAGCGGCATCTCG
TACGGCGCGGGGCTCTCGCTGCTCGCGCTCGCGCAGGACAAGCGGCTGAAGACGGCGGCCGCGCTGTCCGGCTGGGGCGA
TCTCGCCGATCAGCTGTACCCCGCCCAATCGCCGAACGCGACGTGGAGCGCGGTGCTGTTCCTGTCCGGCAAGGTGACGG
GGCGGCTCGATCCGATCGTCGATCAATACGTGAAGGCGCTGCTCGATCCGAACACGACGCAGGCGAAGGCCGACGAGATC
ATCGCGTGGGCGCAGGTGCGCTCGCCGTCGACGTATCTCGACGCGCTGAACCGCCGCGGCGCGCCGGTGTTCATCAGCAA
GAACTTCGAGGACGACATGTTCACGCCGAACTCGTCGATGAAGCTGTTCTCGAAGTTGACGGTGCCGAAGAAGCTGCTGC
TGAATCCGGGCATCCATGCGCAGGCGGAGATTCCGGGCGCGCTCGTCGGCGCGCCGAACTATCCGTACGATCAGGCGCAT
CGCTGGTTCGACCGCTGGCTGAAGGGCGTGCGCAACGGCGTGGACACCGAGCCCCAGGTATCGATGCAGATCAAGTTCAC
GAACACGCGCGAATCGTTCGATACGTGGCCGGCGAGCAACGTGCATGCGCAGACGCTGTACGTCGGGCCGCGCGGCGCGC
TGCGCTGGGATCTGTCGTGCCTGTGCACGAAGGGCGTCTCCGGCACGCTGCAGGCCGCGCCGAACGGCGCCGCGGGCGCC
GATCTGATCCAGAACTTCTCGGATACGACCGCGACGAGCGGGCCGATTCCGGTGCTGTCGACGTTCGGCGAGAGCCTCGG
CGCGCCTGTCGTCAATCAGCTCGCGACCGTCAACCTCGCGACGGGCGTGCGCTATGAGGGCGCGGCGCTCGCGCAGCCGC
TGCATTTGCGCGGCGCGGCGCAACTGAACCTGCGTGCGACGCCGTCGCAGGCGCGCGCGCAGGTGGTCGCGTATCTGTAC
GACGTCGACGCGCTCGGCTTCGGCAAGCTGATCACGCACGGCGCGCGCACCGTGCACTGGGCGAGCCCGGGCGTGACGAT
CGATTTCCCGATCGAGTTCTCCGCGACCGCATACGACGTGCCCGCCGGGCACCACGTCGGCGTCGTGCTCGATACGTTCG
ACAGCCTCTATCAGCCGCCCGTCAATCCGGGCGAGCGGTTCGGCGTGAAATTCGAGTTCGATCCGAACCGCCAGTCGACG
CTGGTGCTGCCGGTGCGCTCGTAA

Upstream 100 bases:

>100_bases
CCGGCGTCGCGCGGGAATCCGCCGAAAACGGGCCGCCGGCCAGACCTTCCACTGAACAAGATCCAACAAGAATCGGAGGA
GATACATGAGACTTGCGCGT

Downstream 100 bases:

>100_bases
GCCCGGGCGCGTGCGGGCGCACGCGCGCCGCGAGCGCTGCGCGCACCGCCGCCCGGCCGCGGGCGGCGCGACGCCCGGCG
CGGTTCGCATCGCGCCGGGC

Product: CocE/NonD family hydrolase

Products: NA

Alternate protein names: Peptidase S; Secreted Esterase/Lipase/Thioesterase Family Protein; ABC Transporter Related Protein; S15 Family Peptidase; X-Pro Dipeptidyl-Peptidase Domain Protein; Hydrolase CocE/NonD Family Protein; Hydrolase; X-Pro Dipeptidyl-Peptidase Protein; ABC Transporter ; S15-Family Peptidase; CocE/NonD Family Hydrolase

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MVTGASVALAASFAHAGVSCRPATPAEAAVYTSPFQFPGVSSPKDGTCWVNNQTVVATDGTRLTANVFLPKITSPDQKFP
TIVMISSWAAADFFEYLGQQRKLAQDGYIVLAYTARGFYLSGGQVEVAGPQDVKDVSSAVDWVSANTPADPDRLAVSGIS
YGAGLSLLALAQDKRLKTAAALSGWGDLADQLYPAQSPNATWSAVLFLSGKVTGRLDPIVDQYVKALLDPNTTQAKADEI
IAWAQVRSPSTYLDALNRRGAPVFISKNFEDDMFTPNSSMKLFSKLTVPKKLLLNPGIHAQAEIPGALVGAPNYPYDQAH
RWFDRWLKGVRNGVDTEPQVSMQIKFTNTRESFDTWPASNVHAQTLYVGPRGALRWDLSCLCTKGVSGTLQAAPNGAAGA
DLIQNFSDTTATSGPIPVLSTFGESLGAPVVNQLATVNLATGVRYEGAALAQPLHLRGAAQLNLRATPSQARAQVVAYLY
DVDALGFGKLITHGARTVHWASPGVTIDFPIEFSATAYDVPAGHHVGVVLDTFDSLYQPPVNPGERFGVKFEFDPNRQST
LVLPVRS

Sequences:

>Translated_567_residues
MVTGASVALAASFAHAGVSCRPATPAEAAVYTSPFQFPGVSSPKDGTCWVNNQTVVATDGTRLTANVFLPKITSPDQKFP
TIVMISSWAAADFFEYLGQQRKLAQDGYIVLAYTARGFYLSGGQVEVAGPQDVKDVSSAVDWVSANTPADPDRLAVSGIS
YGAGLSLLALAQDKRLKTAAALSGWGDLADQLYPAQSPNATWSAVLFLSGKVTGRLDPIVDQYVKALLDPNTTQAKADEI
IAWAQVRSPSTYLDALNRRGAPVFISKNFEDDMFTPNSSMKLFSKLTVPKKLLLNPGIHAQAEIPGALVGAPNYPYDQAH
RWFDRWLKGVRNGVDTEPQVSMQIKFTNTRESFDTWPASNVHAQTLYVGPRGALRWDLSCLCTKGVSGTLQAAPNGAAGA
DLIQNFSDTTATSGPIPVLSTFGESLGAPVVNQLATVNLATGVRYEGAALAQPLHLRGAAQLNLRATPSQARAQVVAYLY
DVDALGFGKLITHGARTVHWASPGVTIDFPIEFSATAYDVPAGHHVGVVLDTFDSLYQPPVNPGERFGVKFEFDPNRQST
LVLPVRS
>Mature_567_residues
MVTGASVALAASFAHAGVSCRPATPAEAAVYTSPFQFPGVSSPKDGTCWVNNQTVVATDGTRLTANVFLPKITSPDQKFP
TIVMISSWAAADFFEYLGQQRKLAQDGYIVLAYTARGFYLSGGQVEVAGPQDVKDVSSAVDWVSANTPADPDRLAVSGIS
YGAGLSLLALAQDKRLKTAAALSGWGDLADQLYPAQSPNATWSAVLFLSGKVTGRLDPIVDQYVKALLDPNTTQAKADEI
IAWAQVRSPSTYLDALNRRGAPVFISKNFEDDMFTPNSSMKLFSKLTVPKKLLLNPGIHAQAEIPGALVGAPNYPYDQAH
RWFDRWLKGVRNGVDTEPQVSMQIKFTNTRESFDTWPASNVHAQTLYVGPRGALRWDLSCLCTKGVSGTLQAAPNGAAGA
DLIQNFSDTTATSGPIPVLSTFGESLGAPVVNQLATVNLATGVRYEGAALAQPLHLRGAAQLNLRATPSQARAQVVAYLY
DVDALGFGKLITHGARTVHWASPGVTIDFPIEFSATAYDVPAGHHVGVVLDTFDSLYQPPVNPGERFGVKFEFDPNRQST
LVLPVRS

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60602; Mature: 60602

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTGASVALAASFAHAGVSCRPATPAEAAVYTSPFQFPGVSSPKDGTCWVNNQTVVATDG
CCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEEEECC
TRLTANVFLPKITSPDQKFPTIVMISSWAAADFFEYLGQQRKLAQDGYIVLAYTARGFYL
CEEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEE
SGGQVEVAGPQDVKDVSSAVDWVSANTPADPDRLAVSGISYGAGLSLLALAQDKRLKTAA
ECCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCHHHHHH
ALSGWGDLADQLYPAQSPNATWSAVLFLSGKVTGRLDPIVDQYVKALLDPNTTQAKADEI
HHCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHE
IAWAQVRSPSTYLDALNRRGAPVFISKNFEDDMFTPNSSMKLFSKLTVPKKLLLNPGIHA
EEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCE
QAEIPGALVGAPNYPYDQAHRWFDRWLKGVRNGVDTEPQVSMQIKFTNTRESFDTWPASN
ECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCC
VHAQTLYVGPRGALRWDLSCLCTKGVSGTLQAAPNGAAGADLIQNFSDTTATSGPIPVLS
CEEEEEEECCCCCEEECCEEEEECCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHH
TFGESLGAPVVNQLATVNLATGVRYEGAALAQPLHLRGAAQLNLRATPSQARAQVVAYLY
HHHHHHCCHHHHHHHEEEEECCCEECCHHHCCCEEECCCEEEEEECCCHHHHHHHHHEEE
DVDALGFGKLITHGARTVHWASPGVTIDFPIEFSATAYDVPAGHHVGVVLDTFDSLYQPP
ECCCCCHHHHHHCCCCEEEECCCCEEEEEEEEECCEEEECCCCCEEEEEEECHHHHHCCC
VNPGERFGVKFEFDPNRQSTLVLPVRS
CCCCHHCCEEEEECCCCCCEEEEEECC
>Mature Secondary Structure
MVTGASVALAASFAHAGVSCRPATPAEAAVYTSPFQFPGVSSPKDGTCWVNNQTVVATDG
CCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEEEECC
TRLTANVFLPKITSPDQKFPTIVMISSWAAADFFEYLGQQRKLAQDGYIVLAYTARGFYL
CEEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEE
SGGQVEVAGPQDVKDVSSAVDWVSANTPADPDRLAVSGISYGAGLSLLALAQDKRLKTAA
ECCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCHHHHHH
ALSGWGDLADQLYPAQSPNATWSAVLFLSGKVTGRLDPIVDQYVKALLDPNTTQAKADEI
HHCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHE
IAWAQVRSPSTYLDALNRRGAPVFISKNFEDDMFTPNSSMKLFSKLTVPKKLLLNPGIHA
EEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCE
QAEIPGALVGAPNYPYDQAHRWFDRWLKGVRNGVDTEPQVSMQIKFTNTRESFDTWPASN
ECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCC
VHAQTLYVGPRGALRWDLSCLCTKGVSGTLQAAPNGAAGADLIQNFSDTTATSGPIPVLS
CEEEEEEECCCCCEEECCEEEEECCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHH
TFGESLGAPVVNQLATVNLATGVRYEGAALAQPLHLRGAAQLNLRATPSQARAQVVAYLY
HHHHHHCCHHHHHHHEEEEECCCEECCHHHCCCEEECCCEEEEEECCCHHHHHHHHHEEE
DVDALGFGKLITHGARTVHWASPGVTIDFPIEFSATAYDVPAGHHVGVVLDTFDSLYQPP
ECCCCCHHHHHHCCCCEEEECCCCEEEEEEEEECCEEEECCCCCEEEEEEECHHHHHCCC
VNPGERFGVKFEFDPNRQSTLVLPVRS
CCCCHHCCEEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA