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The map label for this gene is pqaA

Identifier: 126442964

GI number: 126442964

Start: 127121

End: 128572

Strand: Reverse

Name: pqaA

Synonym: BURPS668_A0147

Alternate gene names: NA

Gene position: 128572-127121 (Counterclockwise)

Preceding gene: 284159984

Following gene: 126444552

Centisome position: 4.11

GC content: 62.47

Gene sequence:

>1452_bases
ATGTTGTCGCTCGCCTACCCGCGCGCCGAAGCCGCGCCGATCGCTTTTCCGTGCCCAATCGACGCGCGCCGCGATTTGAC
CGATACGCTCGCCTGCTACCGGCAGACGGTGGAAAACCAGCCTTTGAACTACACGATGACAGGCATCGTGCAACTGCCCG
GGATCGAACAGCGAACGTATCGGCTTGTTTCGCAATCGTGGTCGCCCGATCAGCTCGTGCGCCCTGACACGTGGGTACAC
GAAGTCGCGCTTTACATTCCGCAAGGCGCGCTGCCCCGTCGCGCACTCGTGATCGCCAATGATGGTACGCGGCACCCAGG
CGAAGGGGAAACGCCGAGGACACCAAACGATTTCCTGCCCGATACGCTGGCGGATATCGCCAGAAGCACGCGCACCGCGG
TCATTTCGGTGAGTGATGTGCCTAACCAGCTTTTGTCTTATGCGGACGACGGCAAGCCGAAAGCGGAGGACGACAGTGTG
GCGCGCAGTTGGACGCTTTTCATGCAGTCGCCGCATACGCGCGGCGCGATGCCTTTGCACGTCCCCATGGCCGCGTCCAT
CTGGCGCGCGATGTCGCTCGCGGAGCGCGAACTGACCTCGCTCGGCATCCATCGCTTCGTCGTCTCCGGCATTTCGAAAC
GTGCTTGGACCACCTGGCTTGCGCTGATCGGAGACCAACGCGTCGATGCCATCGCGCCCTTCGCGATCGATCTGCTCTCG
ACACGAGCCGCGCTCGAGAACATGTATCGTTCATACGGCGGGAATTGGCCGCTGGCCTTCTATCCATATTACGCGGAGGG
TATCGACCGAACGCTAGACAGCCCGGCCTTCGGCCTGCTGATGCGTATCGAAGATCCGCTTTCGTATCTCGGCACGCGCC
ATGGCTCGCGCCTGGCCGTGCCGAAATACATCGTCAACGCAAGCGGCGACGATTTTTTCGTGCCGGACAATTCGCAACGC
TATTTCGACAAGCTTCCCGGTGCGAAGGCGCTACGCATGGTGCCCAATTCCTCGCACTCGGACATTCGCCGCGCCACGCT
CGATTCTCTCGTCCCGTTCGTCAAGCGCATTCAGCACGGCAAGGCATTGCCGCAGGTGGACGCCGCGCCGATCGAGACGA
ACGGCCAGACAATACTGCGGCTGCGCACGTCGGAGCGGCCCCGGCAACTGCTGTTGTGGCAAGCGACGAATCCGCTCGCG
CGCGACTTCCGTTACGCGTGCGGCATCCGCTATACATCGACGCCCATCGCGATGAACGGCGCCCGGCCTCAGCAGTTGGT
TCTCGTGCCGCCGACGAACGGATGGCGAGCCTACTTCGTCGAAGCAACATTCGACGATGGATTCGTCGCAACGAGCCAAA
CGTATATTCTCGGCGACGGCTACCCGAGCACACCGCCGCCGGCAGTCGGCGGTAGCTGCCGAACGCTGCCCGGCCGAGAC
ACACATTCGTGA

Upstream 100 bases:

>100_bases
TCTTCCGGCGGCTCGCCGACAATCGCCATAGAAAGCACATCGTTTCAACTCGAAGGAGCCAAACATGCGGAACAAGGTTG
CAGGTGCCATTGCCCTGTCT

Downstream 100 bases:

>100_bases
TTGCGAAGCGGCGCGGATATCGATCGGCATCCGCTGACCGTCGCTCTTCTGCCGAGCCTCGGGGCGCTACCAGCTATACG
ATGCGCCGGCGCCCCATGTC

Product: PqaA protein

Products: NA

Alternate protein names: PhoPQ-Activated Pathogenicity-Related Protein; PhoPQ-Activated Pathogenicity-Like Protein PqaA Type; PhoPQ-Activated Pathogenicity-Related Protein PqaA Type; PhoPQ-Regulated Protein; Phopq-Activated Pathogenicity-Related Protein Pqaa Type; Secreted Protein; Transmembrane Protein; PhoPQ-Activated Pathogenicity-Like Protein

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MLSLAYPRAEAAPIAFPCPIDARRDLTDTLACYRQTVENQPLNYTMTGIVQLPGIEQRTYRLVSQSWSPDQLVRPDTWVH
EVALYIPQGALPRRALVIANDGTRHPGEGETPRTPNDFLPDTLADIARSTRTAVISVSDVPNQLLSYADDGKPKAEDDSV
ARSWTLFMQSPHTRGAMPLHVPMAASIWRAMSLAERELTSLGIHRFVVSGISKRAWTTWLALIGDQRVDAIAPFAIDLLS
TRAALENMYRSYGGNWPLAFYPYYAEGIDRTLDSPAFGLLMRIEDPLSYLGTRHGSRLAVPKYIVNASGDDFFVPDNSQR
YFDKLPGAKALRMVPNSSHSDIRRATLDSLVPFVKRIQHGKALPQVDAAPIETNGQTILRLRTSERPRQLLLWQATNPLA
RDFRYACGIRYTSTPIAMNGARPQQLVLVPPTNGWRAYFVEATFDDGFVATSQTYILGDGYPSTPPPAVGGSCRTLPGRD
THS

Sequences:

>Translated_483_residues
MLSLAYPRAEAAPIAFPCPIDARRDLTDTLACYRQTVENQPLNYTMTGIVQLPGIEQRTYRLVSQSWSPDQLVRPDTWVH
EVALYIPQGALPRRALVIANDGTRHPGEGETPRTPNDFLPDTLADIARSTRTAVISVSDVPNQLLSYADDGKPKAEDDSV
ARSWTLFMQSPHTRGAMPLHVPMAASIWRAMSLAERELTSLGIHRFVVSGISKRAWTTWLALIGDQRVDAIAPFAIDLLS
TRAALENMYRSYGGNWPLAFYPYYAEGIDRTLDSPAFGLLMRIEDPLSYLGTRHGSRLAVPKYIVNASGDDFFVPDNSQR
YFDKLPGAKALRMVPNSSHSDIRRATLDSLVPFVKRIQHGKALPQVDAAPIETNGQTILRLRTSERPRQLLLWQATNPLA
RDFRYACGIRYTSTPIAMNGARPQQLVLVPPTNGWRAYFVEATFDDGFVATSQTYILGDGYPSTPPPAVGGSCRTLPGRD
THS
>Mature_483_residues
MLSLAYPRAEAAPIAFPCPIDARRDLTDTLACYRQTVENQPLNYTMTGIVQLPGIEQRTYRLVSQSWSPDQLVRPDTWVH
EVALYIPQGALPRRALVIANDGTRHPGEGETPRTPNDFLPDTLADIARSTRTAVISVSDVPNQLLSYADDGKPKAEDDSV
ARSWTLFMQSPHTRGAMPLHVPMAASIWRAMSLAERELTSLGIHRFVVSGISKRAWTTWLALIGDQRVDAIAPFAIDLLS
TRAALENMYRSYGGNWPLAFYPYYAEGIDRTLDSPAFGLLMRIEDPLSYLGTRHGSRLAVPKYIVNASGDDFFVPDNSQR
YFDKLPGAKALRMVPNSSHSDIRRATLDSLVPFVKRIQHGKALPQVDAAPIETNGQTILRLRTSERPRQLLLWQATNPLA
RDFRYACGIRYTSTPIAMNGARPQQLVLVPPTNGWRAYFVEATFDDGFVATSQTYILGDGYPSTPPPAVGGSCRTLPGRD
THS

Specific function: Unknown

COG id: COG4287

COG function: function code R; PhoPQ-activated pathogenicity-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53594; Mature: 53594

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLAYPRAEAAPIAFPCPIDARRDLTDTLACYRQTVENQPLNYTMTGIVQLPGIEQRTY
CCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHH
RLVSQSWSPDQLVRPDTWVHEVALYIPQGALPRRALVIANDGTRHPGEGETPRTPNDFLP
HHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
DTLADIARSTRTAVISVSDVPNQLLSYADDGKPKAEDDSVARSWTLFMQSPHTRGAMPLH
HHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEECCCCCCCCEEE
VPMAASIWRAMSLAERELTSLGIHRFVVSGISKRAWTTWLALIGDQRVDAIAPFAIDLLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TRAALENMYRSYGGNWPLAFYPYYAEGIDRTLDSPAFGLLMRIEDPLSYLGTRHGSRLAV
HHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCHHEEEEEEHHHHHHHHCCCCCEEEC
PKYIVNASGDDFFVPDNSQRYFDKLPGAKALRMVPNSSHSDIRRATLDSLVPFVKRIQHG
CCEEEECCCCEEECCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
KALPQVDAAPIETNGQTILRLRTSERPRQLLLWQATNPLARDFRYACGIRYTSTPIAMNG
CCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCEECCCCEEECC
ARPQQLVLVPPTNGWRAYFVEATFDDGFVATSQTYILGDGYPSTPPPAVGGSCRTLPGRD
CCCCEEEEECCCCCCEEEEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCC
THS
CCC
>Mature Secondary Structure
MLSLAYPRAEAAPIAFPCPIDARRDLTDTLACYRQTVENQPLNYTMTGIVQLPGIEQRTY
CCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHH
RLVSQSWSPDQLVRPDTWVHEVALYIPQGALPRRALVIANDGTRHPGEGETPRTPNDFLP
HHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
DTLADIARSTRTAVISVSDVPNQLLSYADDGKPKAEDDSVARSWTLFMQSPHTRGAMPLH
HHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEECCCCCCCCEEE
VPMAASIWRAMSLAERELTSLGIHRFVVSGISKRAWTTWLALIGDQRVDAIAPFAIDLLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TRAALENMYRSYGGNWPLAFYPYYAEGIDRTLDSPAFGLLMRIEDPLSYLGTRHGSRLAV
HHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCHHEEEEEEHHHHHHHHCCCCCEEEC
PKYIVNASGDDFFVPDNSQRYFDKLPGAKALRMVPNSSHSDIRRATLDSLVPFVKRIQHG
CCEEEECCCCEEECCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
KALPQVDAAPIETNGQTILRLRTSERPRQLLLWQATNPLARDFRYACGIRYTSTPIAMNG
CCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCEECCCCEEECC
ARPQQLVLVPPTNGWRAYFVEATFDDGFVATSQTYILGDGYPSTPPPAVGGSCRTLPGRD
CCCCEEEEECCCCCCEEEEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCC
THS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA