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The map label for this gene is ynfJ [C]

Identifier: 126442778

GI number: 126442778

Start: 2564790

End: 2566097

Strand: Reverse

Name: ynfJ [C]

Synonym: BURPS668_A2677

Alternate gene names: 126442778

Gene position: 2566097-2564790 (Counterclockwise)

Preceding gene: 126442373

Following gene: 126443349

Centisome position: 82.05

GC content: 72.17

Gene sequence:

>1308_bases
ATGTCCTGTCGAATCTGGAAATTCATGAAACGTCTGCACGCTTTCGAGCCCGTCGCGGCGCTCGCGCATCTGTGCCGCTG
GCTCGCGCTGTCAGCCGTCGTCGGCGCGCTCGCCGGCTCGGCGTCCGCGCTCTTCCTGTGGGCGCTCGATCTTGCCGCCG
GCACGCGCATCGCGCATCCGTGGCTGCTGTGGCTGCTGCCCGCGGCGGGTTTCGCGACGGGCTGGGTCTATCATCGCGTC
GGCCGTAGTGTCGAGCGCGGCAACAATCTGCTGATCGACGAGATTCACGATCCGCGGGCGATCGTGCCCACGCGCATGGC
GCCGCTCGTGCTCGTCGCGACCGTCGTCACGCACCTGTTCGGCGGCTCCGCGGGGCGCGAAGGCACCGCGGTGCAGATGG
GCGGCGCGCTCGCCGATCGCGTCACGCAGCTCGTCGGGCTCGATCGCGACGCGCGCCGCATCATGCTGATGGGCGGGATC
GCCGCGGGCTTCTCGTCGGTGTTCGGCACGCCGCTCGCGGGCGCGGTGTTCGGTCTCGAAGTGCTCGCGATCGGCCGGCT
GCGCTACGACGCGCTCTTCGCCTGCGTCGCGGCGTCGATCGTCGCGGACGCGGTGTGCCGGCTATGGGGCGTCCATCACA
CCGTCTACGTCGTGCCTTTCGTGCCCGCGCCGAGCGCGGCGGGCGTCGCGTCGGCGGTGGCGGCGGGCATCGCGTTCGGT
GTCGTCGGCCGGCTGTTCGCCGCCGCCACGCACGGGCTCGCCGCGCTCGCGAAGCGCCGGATCGCGTATCCGCCGCTGCG
GCCCGTCGCGGGCGGCGCGCTCGTCGCGCTCGCGGCGACGCTGCTGCATGCGCCGCAGTATCTCGGCCTCGGCATCCCGA
CGATCGAGGCCGCGTTTCGCGCGCCGTTGCCCGTCTACGATTTCGCGGGCAAGTTCGCGTTCACGGTCGTCACGCTCGCG
TCGGGCTTCAAGGGCGGCGAAGTGACGCCGCTCTTCTATATCGGCGCGACGCTCGGTAACGCGCTGTCGCCTCTGCTCGC
GCTGCCGGCGCCGGTGCTCGCGGGGCTCGGCTTCGTCGCGGTGTTCGCCGGCGCGGCGAACACGCCGATCGCGTCGACGA
TCATGGCGATCGAGTTGTTCGGCGCGCCGATCGGCGTGTATGCGGCGCTGGCCTGCGTCGTCGCGTATCTGTTCTCCGGG
CACGCTGGCATCTATCGCGCGCAGCGGATCGGTCACGCGAAGCTGCCCGGGCCGCGCGGCGATGCGCGCGTCGCGAAGTC
GGCGGCGGGGCAGACGGCGCCGCGCTGA

Upstream 100 bases:

>100_bases
CGTACAACCGCCGGCGAGCCGGCTGATGATGCCTACGCGTTCCTGGGTGCAGGAGGTCGTAGGCCATCCGTGACAAGCGG
CGTTCTGCCGCCCGGGTTTG

Downstream 100 bases:

>100_bases
GCACGCGGCGCGGCGGCGAGCCGGGCACGCGCGATCGTGCCCGCTCGTGCCCGCTCGTGCGCGCGCCGGATGCGATGCGC
CCGCGCCGATCGCGTTGCCA

Product: chloride channel (ClC) family protein

Products: NA

Alternate protein names: Chloride Channel Core; Voltage-Gated Chloride Channel Family Protein; Voltage-Gated Chloride Channel; Chloride Channel Protein; Chloride Channel Protein EriC; Voltage Gated Chloride Channel Protein; Cl- Channel Voltage Gated; Permease Chloride Channel; Chloride Channel Voltage Gated Protein; Voltage-Gated Chloride Channel Protein; Chloride Channel; Voltage Gated Chloride Channel Family Protein; Chloride Channel Family Protein; Chloride Transporter Chloride Channel Family; Chloride Ion Channel Protein; Chloride Channel Protein CIC Family; Voltage Gated Chloride Channel Family; Permease Chloride Channel; Voltage Gated Chloride Channel; Chloride Channel Voltage Gated Family Protein; (Voltage-Gated) Chloride Channel Family Protein; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSCRIWKFMKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALFLWALDLAAGTRIAHPWLLWLLPAAGFATGWVYHRV
GRSVERGNNLLIDEIHDPRAIVPTRMAPLVLVATVVTHLFGGSAGREGTAVQMGGALADRVTQLVGLDRDARRIMLMGGI
AAGFSSVFGTPLAGAVFGLEVLAIGRLRYDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFG
VVGRLFAAATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFRAPLPVYDFAGKFAFTVVTLA
SGFKGGEVTPLFYIGATLGNALSPLLALPAPVLAGLGFVAVFAGAANTPIASTIMAIELFGAPIGVYAALACVVAYLFSG
HAGIYRAQRIGHAKLPGPRGDARVAKSAAGQTAPR

Sequences:

>Translated_435_residues
MSCRIWKFMKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALFLWALDLAAGTRIAHPWLLWLLPAAGFATGWVYHRV
GRSVERGNNLLIDEIHDPRAIVPTRMAPLVLVATVVTHLFGGSAGREGTAVQMGGALADRVTQLVGLDRDARRIMLMGGI
AAGFSSVFGTPLAGAVFGLEVLAIGRLRYDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFG
VVGRLFAAATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFRAPLPVYDFAGKFAFTVVTLA
SGFKGGEVTPLFYIGATLGNALSPLLALPAPVLAGLGFVAVFAGAANTPIASTIMAIELFGAPIGVYAALACVVAYLFSG
HAGIYRAQRIGHAKLPGPRGDARVAKSAAGQTAPR
>Mature_434_residues
SCRIWKFMKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALFLWALDLAAGTRIAHPWLLWLLPAAGFATGWVYHRVG
RSVERGNNLLIDEIHDPRAIVPTRMAPLVLVATVVTHLFGGSAGREGTAVQMGGALADRVTQLVGLDRDARRIMLMGGIA
AGFSSVFGTPLAGAVFGLEVLAIGRLRYDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFGV
VGRLFAAATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFRAPLPVYDFAGKFAFTVVTLAS
GFKGGEVTPLFYIGATLGNALSPLLALPAPVLAGLGFVAVFAGAANTPIASTIMAIELFGAPIGVYAALACVVAYLFSGH
AGIYRAQRIGHAKLPGPRGDARVAKSAAGQTAPR

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44852; Mature: 44721

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCRIWKFMKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALFLWALDLAAGTRIAHP
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH
WLLWLLPAAGFATGWVYHRVGRSVERGNNLLIDEIHDPRAIVPTRMAPLVLVATVVTHLF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
GGSAGREGTAVQMGGALADRVTQLVGLDRDARRIMLMGGIAAGFSSVFGTPLAGAVFGLE
CCCCCCCCCEEEECHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHCCCHHHHHHHHH
VLAIGRLRYDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
VVGRLFAAATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHC
APLPVYDFAGKFAFTVVTLASGFKGGEVTPLFYIGATLGNALSPLLALPAPVLAGLGFVA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHH
VFAGAANTPIASTIMAIELFGAPIGVYAALACVVAYLFSGHAGIYRAQRIGHAKLPGPRG
HHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC
DARVAKSAAGQTAPR
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
SCRIWKFMKRLHAFEPVAALAHLCRWLALSAVVGALAGSASALFLWALDLAAGTRIAHP
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH
WLLWLLPAAGFATGWVYHRVGRSVERGNNLLIDEIHDPRAIVPTRMAPLVLVATVVTHLF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
GGSAGREGTAVQMGGALADRVTQLVGLDRDARRIMLMGGIAAGFSSVFGTPLAGAVFGLE
CCCCCCCCCEEEECHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHCCCHHHHHHHHH
VLAIGRLRYDALFACVAASIVADAVCRLWGVHHTVYVVPFVPAPSAAGVASAVAAGIAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
VVGRLFAAATHGLAALAKRRIAYPPLRPVAGGALVALAATLLHAPQYLGLGIPTIEAAFR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHC
APLPVYDFAGKFAFTVVTLASGFKGGEVTPLFYIGATLGNALSPLLALPAPVLAGLGFVA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHH
VFAGAANTPIASTIMAIELFGAPIGVYAALACVVAYLFSGHAGIYRAQRIGHAKLPGPRG
HHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC
DARVAKSAAGQTAPR
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA