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The map label for this gene is 126442678

Identifier: 126442678

GI number: 126442678

Start: 159528

End: 161408

Strand: Reverse

Name: 126442678

Synonym: BURPS668_A0172

Alternate gene names: NA

Gene position: 161408-159528 (Counterclockwise)

Preceding gene: 126444854

Following gene: 126443395

Centisome position: 5.16

GC content: 64.01

Gene sequence:

>1881_bases
ATGGACCCGCAGTTTCTCGATCACTACAACCGCGAATTGACCTACATGCGGGAGTTGTCCGCGGAATTCGCGGCGCAACA
CCCGAAGATCGCGCGCCGACTCGGCATGCAAGGCATCGAAGTGGCGGACCCGTACGTAGAACGGCTCATCGAGGCGTTCT
GCTTCATGTCCGCGCGCACGCAACTCAAGCTCGAGGCGGAGTTCCCCCGCTTCACGCAACGCCTGCTCGAAGTCGCCTAT
CCGAATTACGTCGCGCCGACGCCGTCGATGGCCGTCGCGCGCCTGCGTCCAAGCCTGCGGGAAGGCGACTTCAGCAAGGG
GTTCAAGGTTCCGCGTCACAGCATGCTGCGCTCGTCGATCCCGCCCGGCGAGCAGACCGCATGCGAATTCCGCACCGGCC
AGGACATCACGCTCTGGCCCATCGAGATCGCCGGCGCGACGCTGACCGCCGTGCCGCCCGATCTTCCGGATCTTCAGCGC
AGCCTGCTGCCGCACACGAAGCTGCGCGGCGCACTCCGGCTGCGCGTGCGCACCGTCGGCGAAATCAGGTTTTCGCAAAT
TACCGGACTCGATCGCCTCTCGCTGTATATCGGCGGCGACGAACGCATCGCCTCCCATCTTTTCGAGCTGATTCACGCGA
GCAGCGTCGCGTCGGTCGTGCGCGCGCCGGGCGCCGCGCGCAGCGAAGGCGCCGTCGTCGCGAAGAATGCGGTCGACTTC
GAAGGCCTGTCGCCCGATCAAAGCCTGTTGCCGCTCGTCTGGAATACGTTCCACGGGCACAATCTGCTGCACGAATACTT
CACCTGCCGTCAGCGCTTCTATTTCTTCGCGCTCACGCAATTGAACGCCGGCTTGTCGCGCATCGACGGAAAGGAAGCCG
AAATCGTGCTGTTGCTCGACCGCTTGCCCGACGAGCTCGTCACGCACGTCGAGGCCGCGCGCTTTCTGCTGTTTTGCGCC
CCCATCGTCAATCTGTTCCCGAAGCGGACCGACCGGGTGGAAATCAATCGCGCCCAAACGGCTTTCCACCTGATACCGGA
CCGCACCCGCCCGCTCGATTACGAAGTATTCTCGGTGTCGCGCGTGTTCGGGCAAAAAGCCGAGACGTCGACGGAAGTCA
CGTTCAATCCGCTCTATCAGACGCTGCATAGCGACATCGGCAATTACGGCCGGTATTTCTCGATCCTGCGCGAACCCAGA
ACGACATCGACCAACGCGCGTAAATATGGAACGCGCACGCCATACGTCGGAACGGAAGTCTACGTGTCGCTCGTCGACCA
GGCCGAAGCGCCGTACGCCGACGACATTCGTTACCTGTCCGTCGACGCATGGGTCACCAACCGCGATCTGCCCCGACTGA
TCCCGCGCAACGGCGTCAACGATCTGACGATGCAAGACTCCGTGCCGATCGAGGGCGTGAGCCTCGTCCATCCGCCGAGC
GCGCCGCGCGAGCCGTACGCGACCGGCGAAACCGCGTGGCGGCTGATTCGCCAGCTCAGCTTCAACTACATGCCGCTTGC
CGAGCTCGACCACCGCGACGGCGGGCAAGCACTGCGCAACATGCTGCGCCTCTTCGTCGGCACGAGCGAGCGCGAACAGG
CCACGCAGATCGACAGCCTGGTCGGCGCGCGCACGGAGCCTGTCGTCCGCCGTCTGCCCGGCCACGGATTACTGGTTTAC
GGGCGCGGCGTCCGGTGCGAGCTGACCGTCGACGAAAGCGGCTTCTCCGGGTTGAGTCCATACCTGTTCGGTCTCGTGCT
CGAGCAATACCTCACGCGCCACGTCTCGATCAATGTGTTCACCGAGACGGAGCTTCGCTCGATGCAACGCGGCCTCGTCA
CGCGCTGGAAACCGCGCATGGGCGGAAGGGGCGCGGTATGA

Upstream 100 bases:

>100_bases
CAATGGTCGCCGTATCCGCTGGAGTTGCGCATCCAGAGCACGTTCGACCTCGAATTGAATCGAGTCACGCTCGAGAAGAC
GACGCTCAACGGAAATTGAT

Downstream 100 bases:

>100_bases
CGGCGCATCCGCCCGCCGCCCGGCCCATCGACGCCCACTCGCCCCTGCATCCGGACGCACTGCGGGCATGGTTCGATCCG
CAAGCGCCGTGGCGCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Protein ImpG/VasA; Type VI Secretion

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MDPQFLDHYNRELTYMRELSAEFAAQHPKIARRLGMQGIEVADPYVERLIEAFCFMSARTQLKLEAEFPRFTQRLLEVAY
PNYVAPTPSMAVARLRPSLREGDFSKGFKVPRHSMLRSSIPPGEQTACEFRTGQDITLWPIEIAGATLTAVPPDLPDLQR
SLLPHTKLRGALRLRVRTVGEIRFSQITGLDRLSLYIGGDERIASHLFELIHASSVASVVRAPGAARSEGAVVAKNAVDF
EGLSPDQSLLPLVWNTFHGHNLLHEYFTCRQRFYFFALTQLNAGLSRIDGKEAEIVLLLDRLPDELVTHVEAARFLLFCA
PIVNLFPKRTDRVEINRAQTAFHLIPDRTRPLDYEVFSVSRVFGQKAETSTEVTFNPLYQTLHSDIGNYGRYFSILREPR
TTSTNARKYGTRTPYVGTEVYVSLVDQAEAPYADDIRYLSVDAWVTNRDLPRLIPRNGVNDLTMQDSVPIEGVSLVHPPS
APREPYATGETAWRLIRQLSFNYMPLAELDHRDGGQALRNMLRLFVGTSEREQATQIDSLVGARTEPVVRRLPGHGLLVY
GRGVRCELTVDESGFSGLSPYLFGLVLEQYLTRHVSINVFTETELRSMQRGLVTRWKPRMGGRGAV

Sequences:

>Translated_626_residues
MDPQFLDHYNRELTYMRELSAEFAAQHPKIARRLGMQGIEVADPYVERLIEAFCFMSARTQLKLEAEFPRFTQRLLEVAY
PNYVAPTPSMAVARLRPSLREGDFSKGFKVPRHSMLRSSIPPGEQTACEFRTGQDITLWPIEIAGATLTAVPPDLPDLQR
SLLPHTKLRGALRLRVRTVGEIRFSQITGLDRLSLYIGGDERIASHLFELIHASSVASVVRAPGAARSEGAVVAKNAVDF
EGLSPDQSLLPLVWNTFHGHNLLHEYFTCRQRFYFFALTQLNAGLSRIDGKEAEIVLLLDRLPDELVTHVEAARFLLFCA
PIVNLFPKRTDRVEINRAQTAFHLIPDRTRPLDYEVFSVSRVFGQKAETSTEVTFNPLYQTLHSDIGNYGRYFSILREPR
TTSTNARKYGTRTPYVGTEVYVSLVDQAEAPYADDIRYLSVDAWVTNRDLPRLIPRNGVNDLTMQDSVPIEGVSLVHPPS
APREPYATGETAWRLIRQLSFNYMPLAELDHRDGGQALRNMLRLFVGTSEREQATQIDSLVGARTEPVVRRLPGHGLLVY
GRGVRCELTVDESGFSGLSPYLFGLVLEQYLTRHVSINVFTETELRSMQRGLVTRWKPRMGGRGAV
>Mature_626_residues
MDPQFLDHYNRELTYMRELSAEFAAQHPKIARRLGMQGIEVADPYVERLIEAFCFMSARTQLKLEAEFPRFTQRLLEVAY
PNYVAPTPSMAVARLRPSLREGDFSKGFKVPRHSMLRSSIPPGEQTACEFRTGQDITLWPIEIAGATLTAVPPDLPDLQR
SLLPHTKLRGALRLRVRTVGEIRFSQITGLDRLSLYIGGDERIASHLFELIHASSVASVVRAPGAARSEGAVVAKNAVDF
EGLSPDQSLLPLVWNTFHGHNLLHEYFTCRQRFYFFALTQLNAGLSRIDGKEAEIVLLLDRLPDELVTHVEAARFLLFCA
PIVNLFPKRTDRVEINRAQTAFHLIPDRTRPLDYEVFSVSRVFGQKAETSTEVTFNPLYQTLHSDIGNYGRYFSILREPR
TTSTNARKYGTRTPYVGTEVYVSLVDQAEAPYADDIRYLSVDAWVTNRDLPRLIPRNGVNDLTMQDSVPIEGVSLVHPPS
APREPYATGETAWRLIRQLSFNYMPLAELDHRDGGQALRNMLRLFVGTSEREQATQIDSLVGARTEPVVRRLPGHGLLVY
GRGVRCELTVDESGFSGLSPYLFGLVLEQYLTRHVSINVFTETELRSMQRGLVTRWKPRMGGRGAV

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70688; Mature: 70688

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPQFLDHYNRELTYMRELSAEFAAQHPKIARRLGMQGIEVADPYVERLIEAFCFMSART
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
QLKLEAEFPRFTQRLLEVAYPNYVAPTPSMAVARLRPSLREGDFSKGFKVPRHSMLRSSI
EEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCHHHHHHCCC
PPGEQTACEFRTGQDITLWPIEIAGATLTAVPPDLPDLQRSLLPHTKLRGALRLRVRTVG
CCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCHHHHHHHCCHHHHHHHHEEEEEHHH
EIRFSQITGLDRLSLYIGGDERIASHLFELIHASSVASVVRAPGAARSEGAVVAKNAVDF
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
EGLSPDQSLLPLVWNTFHGHNLLHEYFTCRQRFYFFALTQLNAGLSRIDGKEAEIVLLLD
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEHH
RLPDELVTHVEAARFLLFCAPIVNLFPKRTDRVEINRAQTAFHLIPDRTRPLDYEVFSVS
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHEEEECCCCCCCCCHHHHHHH
RVFGQKAETSTEVTFNPLYQTLHSDIGNYGRYFSILREPRTTSTNARKYGTRTPYVGTEV
HHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHH
YVSLVDQAEAPYADDIRYLSVDAWVTNRDLPRLIPRNGVNDLTMQDSVPIEGVSLVHPPS
HHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCC
APREPYATGETAWRLIRQLSFNYMPLAELDHRDGGQALRNMLRLFVGTSEREQATQIDSL
CCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
VGARTEPVVRRLPGHGLLVYGRGVRCELTVDESGFSGLSPYLFGLVLEQYLTRHVSINVF
HCCCCCHHHHHCCCCCEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEE
TETELRSMQRGLVTRWKPRMGGRGAV
EHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDPQFLDHYNRELTYMRELSAEFAAQHPKIARRLGMQGIEVADPYVERLIEAFCFMSART
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
QLKLEAEFPRFTQRLLEVAYPNYVAPTPSMAVARLRPSLREGDFSKGFKVPRHSMLRSSI
EEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCHHHHHHCCC
PPGEQTACEFRTGQDITLWPIEIAGATLTAVPPDLPDLQRSLLPHTKLRGALRLRVRTVG
CCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCHHHHHHHCCHHHHHHHHEEEEEHHH
EIRFSQITGLDRLSLYIGGDERIASHLFELIHASSVASVVRAPGAARSEGAVVAKNAVDF
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
EGLSPDQSLLPLVWNTFHGHNLLHEYFTCRQRFYFFALTQLNAGLSRIDGKEAEIVLLLD
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEHH
RLPDELVTHVEAARFLLFCAPIVNLFPKRTDRVEINRAQTAFHLIPDRTRPLDYEVFSVS
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHEEEECCCCCCCCCHHHHHHH
RVFGQKAETSTEVTFNPLYQTLHSDIGNYGRYFSILREPRTTSTNARKYGTRTPYVGTEV
HHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHH
YVSLVDQAEAPYADDIRYLSVDAWVTNRDLPRLIPRNGVNDLTMQDSVPIEGVSLVHPPS
HHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCC
APREPYATGETAWRLIRQLSFNYMPLAELDHRDGGQALRNMLRLFVGTSEREQATQIDSL
CCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
VGARTEPVVRRLPGHGLLVYGRGVRCELTVDESGFSGLSPYLFGLVLEQYLTRHVSINVF
HCCCCCHHHHHCCCCCEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEE
TETELRSMQRGLVTRWKPRMGGRGAV
EHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA