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The map label for this gene is arrD [H]

Identifier: 126442619

GI number: 126442619

Start: 2273582

End: 2274394

Strand: Reverse

Name: arrD [H]

Synonym: BURPS668_A2335

Alternate gene names: 126442619

Gene position: 2274394-2273582 (Counterclockwise)

Preceding gene: 126443451

Following gene: 126444964

Centisome position: 72.72

GC content: 69.37

Gene sequence:

>813_bases
ATGGGGCTCAGTGATCTCTTCGGCGCGCTCGCGCGGCTGTTCGGCATGAACCCGGCGCCGGTCGTCGACGTGCCGACGTC
CTCGATCGAGTCGACGAAAACGGACATCCAGGATCCTACTGCACCACTTCCAGCCGCTCCTGATACGAGTTTCGCGATGG
GTGGGGCGGAAATCGCGCCGGCTGTACCGAAAAACGTTCCATCCGATGCAGATGACGACGCGTGGCTCGCGCTCTGCCGT
CCGCTGTCGCAGCACTTCGAAAGCTGCTACCTGACCGCCTATCCTGACCCGGCGTCGCCACTCGGCAAAGCACTGCAGGC
GCGCGGCCTCTGGTACAAGGTGCTCGGCGGCGCGCCGATCCCGAGCGACCCCGCGCTGCGCGCGCTGAGTGGCGCGCCGT
GGACGTGCGGATGGGGCTCGACCGGGCCGGATGTGCGCGAGGGTACGGTCTGGACGCAGGCGACCGCCGACGCGCGCCAC
GACGCGAACCTGCGCGCCGCGGCAGCGCTCATCGACCAGGCCGCGCGCGTGCAACTGTCGGCGCAGCAGAAGGCGGCCAT
GACGAGCATCGTGAACAACGTTGGGGCCGGCCGCGCGCGGCGAGCAGGCGATCCAGGGCGCGATGGCATCATCACGCTCG
CCAGCGGCCAGCCATCGACGCTCTTGCGGCATCTGAACATCGGCGACTTCGCTGGCGCGGCCGATCAGTTTCCCGCGTGG
AACCGCGCGGGCGGCGTCGTGCAGCCCGGTCTCGTGCGCCGGCGCGCAGCTGAGCGCGATCTCTTCCTCACCGGCCATTG
GAGCGCGTCATGA

Upstream 100 bases:

>100_bases
ACGTACTTCCCGAGCATCCCACAGACGTTCTGGCCGGCGGCTGGCGTCGTGCTCGCGATGATCGCCCGTGTGATCGAGTT
CACGGCGAAGGGAGGGGGCG

Downstream 100 bases:

>100_bases
CGATCATTCCCATCCTGCTGAAATTCGGCCCGTGGCTGCTCGCGGTGGCGGGCGTGCTGTTCGGCATGTTCCGACATCAG
CAAGCCCGCACGGCGACCGC

Product: Phage-like lysozyme

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MGLSDLFGALARLFGMNPAPVVDVPTSSIESTKTDIQDPTAPLPAAPDTSFAMGGAEIAPAVPKNVPSDADDDAWLALCR
PLSQHFESCYLTAYPDPASPLGKALQARGLWYKVLGGAPIPSDPALRALSGAPWTCGWGSTGPDVREGTVWTQATADARH
DANLRAAAALIDQAARVQLSAQQKAAMTSIVNNVGAGRARRAGDPGRDGIITLASGQPSTLLRHLNIGDFAGAADQFPAW
NRAGGVVQPGLVRRRAAERDLFLTGHWSAS

Sequences:

>Translated_270_residues
MGLSDLFGALARLFGMNPAPVVDVPTSSIESTKTDIQDPTAPLPAAPDTSFAMGGAEIAPAVPKNVPSDADDDAWLALCR
PLSQHFESCYLTAYPDPASPLGKALQARGLWYKVLGGAPIPSDPALRALSGAPWTCGWGSTGPDVREGTVWTQATADARH
DANLRAAAALIDQAARVQLSAQQKAAMTSIVNNVGAGRARRAGDPGRDGIITLASGQPSTLLRHLNIGDFAGAADQFPAW
NRAGGVVQPGLVRRRAAERDLFLTGHWSAS
>Mature_269_residues
GLSDLFGALARLFGMNPAPVVDVPTSSIESTKTDIQDPTAPLPAAPDTSFAMGGAEIAPAVPKNVPSDADDDAWLALCRP
LSQHFESCYLTAYPDPASPLGKALQARGLWYKVLGGAPIPSDPALRALSGAPWTCGWGSTGPDVREGTVWTQATADARHD
ANLRAAAALIDQAARVQLSAQQKAAMTSIVNNVGAGRARRAGDPGRDGIITLASGQPSTLLRHLNIGDFAGAADQFPAWN
RAGGVVQPGLVRRRAAERDLFLTGHWSAS

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=133, Percent_Identity=35.3383458646617, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 28138; Mature: 28007

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSDLFGALARLFGMNPAPVVDVPTSSIESTKTDIQDPTAPLPAAPDTSFAMGGAEIAP
CCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHCC
AVPKNVPSDADDDAWLALCRPLSQHFESCYLTAYPDPASPLGKALQARGLWYKVLGGAPI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEECCCCC
PSDPALRALSGAPWTCGWGSTGPDVREGTVWTQATADARHDANLRAAAALIDQAARVQLS
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
AQQKAAMTSIVNNVGAGRARRAGDPGRDGIITLASGQPSTLLRHLNIGDFAGAADQFPAW
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCHHCCCCCCCCCC
NRAGGVVQPGLVRRRAAERDLFLTGHWSAS
CCCCCCCCCHHHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure 
GLSDLFGALARLFGMNPAPVVDVPTSSIESTKTDIQDPTAPLPAAPDTSFAMGGAEIAP
CHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHCC
AVPKNVPSDADDDAWLALCRPLSQHFESCYLTAYPDPASPLGKALQARGLWYKVLGGAPI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEECCCCC
PSDPALRALSGAPWTCGWGSTGPDVREGTVWTQATADARHDANLRAAAALIDQAARVQLS
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
AQQKAAMTSIVNNVGAGRARRAGDPGRDGIITLASGQPSTLLRHLNIGDFAGAADQFPAW
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCHHCCCCCCCCCC
NRAGGVVQPGLVRRRAAERDLFLTGHWSAS
CCCCCCCCCHHHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]