| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126442591
Identifier: 126442591
GI number: 126442591
Start: 481436
End: 482917
Strand: Reverse
Name: 126442591
Synonym: BURPS668_A0528
Alternate gene names: NA
Gene position: 482917-481436 (Counterclockwise)
Preceding gene: 126443516
Following gene: 126444939
Centisome position: 15.44
GC content: 75.37
Gene sequence:
>1482_bases ATGAGCGCCCGTCGCCTCTACGTCGGCGCGACGTTCACCGCTTCGCCGCTCGATCCGCTGCTGCGCGCACGAGGCTTCGG CGACGTCGCGTTCGCGCGCTACAACCAGTTGCTGCAGGCGCTCGTCGCCCCCGATCCGCGGCATGCGGACGATGCGACGC TGCTGCTCGTGCGGCTCGCCGATTTCGTGCGGCACGAGGCGAACGATCGCACCCAATCGCCCGACGCGCTCGCCGCGCTG CTCGCGCAACGCGCGGATGCGTGGCTCGATGCGCTCGCCTCATTCGCCGCCGGCCGCGCGAGGCCGCCGTGCATCGTCGT GCTGCCGTCGCCCGCGCTTGATGCGCGCGGCGCGGCGCCCGCCGACACAGGCCGGCGGCTCGAGCGCGCGCTGCTCGGCG TGCCCGGCTTGCGCGCGCTCGATTGGGCGGACTTCGCGGCATCGAGCGCGATCGCGCAGCCGTTCGATCCGATCGCGGAC AAGCTCGGCCACGTGCCGTTGTCGATCGAAGGCTTCGCCGCGTTCGCGCAATGGCTCGCCGAACGCCTGCGCGGCGAAGC GGGCGAAGCCGCGCACGCCGGCAAGCATGGCGGCGACGCGGCCCCCGCCGGCGCGAACGCGAACCCACCCGCGCGCGCCG AGGCCGATGCAGCCCGCGCACCGGCCGGCGCGCACGCGAATGTCGATCCGCATGCCGCCGCCGACATCGCCGCCGCCACC GGTCGCGCCGCGGCCGCGCATCCGGGCGCCGAAGCCGCCGGCCCGGCCGATGCGGCCGCCGCGCGCGCGGCCGTGCCGCC GCACGCGCGTGCGCCGGCCGACGCGCCGGCCCCCGCCGCATCGCCCGCCGCGCCCTCGCCGTCGCTTGCCCGCTTCTTCG AACGGCTGCAACTGCGCATCGCCGGCGTTGCGCTCGACGACGAGACCGCGCTCGCGAAAAGCGCGCGTCTGAGCCATACG GCTGCGACGTTCCATCTGAGCGGCCGCCCGTATCTCGAAGCCGACTTGCTCGACGCGACCTCGCGCGACGCCGCCGCACT CGCGCTGACCGCCGCCGACCGCTTCGGCCAATACGGCTGCAGCGGCTTCGTTCTCGTGCGCGCCGACGCCGGCTTGCCCG TGCTCGCCGAATTCGTGCTGAGCTGCACGGTGCTCGGCAAGCAGGTCGAGCACGGCGTGCTGCTCGCGCTTGCGCAGGCG GCGCAACGCGCCGCGCTGCCGGCCGTCGCGCTCGACTACGTGCGCACCGACGGCAACCAGCCGGCCGTCGACTTCGTCGA CGCGATCGCCGCGCAAGCCGGCGTCGCCCTCGATCGAAGCGGCCCGCGCGCGCGCCTGCGCATCGCGCCGTGCGCGCTCG CCGAGGCCGTGCTCGCCTGCGCGAAAGCGCCGCAAGCGCTCGCGGCGGCCGCTCAGGCGCTCGATCTCGCGCCGCTCTTC TCCCACTCGAACGCAACCGCTCACCCGGCCGCCCATCGATGA
Upstream 100 bases:
>100_bases TCGCGCACGCGCAAGTGCGCGCGGCGTTCCGGTTCCCGACCGAGGCCGCGGGCGGGCTCTACCAGGCGGCGCCGGCCGGC GCCGAGCCGGAGCTCGCGCG
Downstream 100 bases:
>100_bases ACGCGAACCTCCACGCCTTCACTGCCGCGGACGCCGCGCCGAGCACCGAATACTGGTGGGCGCGCGAGCGGCTGCACTAC CGCGGCAACGCGCTGCATTT
Product: FkbH domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MSARRLYVGATFTASPLDPLLRARGFGDVAFARYNQLLQALVAPDPRHADDATLLLVRLADFVRHEANDRTQSPDALAAL LAQRADAWLDALASFAAGRARPPCIVVLPSPALDARGAAPADTGRRLERALLGVPGLRALDWADFAASSAIAQPFDPIAD KLGHVPLSIEGFAAFAQWLAERLRGEAGEAAHAGKHGGDAAPAGANANPPARAEADAARAPAGAHANVDPHAAADIAAAT GRAAAAHPGAEAAGPADAAAARAAVPPHARAPADAPAPAASPAAPSPSLARFFERLQLRIAGVALDDETALAKSARLSHT AATFHLSGRPYLEADLLDATSRDAAALALTAADRFGQYGCSGFVLVRADAGLPVLAEFVLSCTVLGKQVEHGVLLALAQA AQRAALPAVALDYVRTDGNQPAVDFVDAIAAQAGVALDRSGPRARLRIAPCALAEAVLACAKAPQALAAAAQALDLAPLF SHSNATAHPAAHR
Sequences:
>Translated_493_residues MSARRLYVGATFTASPLDPLLRARGFGDVAFARYNQLLQALVAPDPRHADDATLLLVRLADFVRHEANDRTQSPDALAAL LAQRADAWLDALASFAAGRARPPCIVVLPSPALDARGAAPADTGRRLERALLGVPGLRALDWADFAASSAIAQPFDPIAD KLGHVPLSIEGFAAFAQWLAERLRGEAGEAAHAGKHGGDAAPAGANANPPARAEADAARAPAGAHANVDPHAAADIAAAT GRAAAAHPGAEAAGPADAAAARAAVPPHARAPADAPAPAASPAAPSPSLARFFERLQLRIAGVALDDETALAKSARLSHT AATFHLSGRPYLEADLLDATSRDAAALALTAADRFGQYGCSGFVLVRADAGLPVLAEFVLSCTVLGKQVEHGVLLALAQA AQRAALPAVALDYVRTDGNQPAVDFVDAIAAQAGVALDRSGPRARLRIAPCALAEAVLACAKAPQALAAAAQALDLAPLF SHSNATAHPAAHR >Mature_492_residues SARRLYVGATFTASPLDPLLRARGFGDVAFARYNQLLQALVAPDPRHADDATLLLVRLADFVRHEANDRTQSPDALAALL AQRADAWLDALASFAAGRARPPCIVVLPSPALDARGAAPADTGRRLERALLGVPGLRALDWADFAASSAIAQPFDPIADK LGHVPLSIEGFAAFAQWLAERLRGEAGEAAHAGKHGGDAAPAGANANPPARAEADAARAPAGAHANVDPHAAADIAAATG RAAAAHPGAEAAGPADAAAARAAVPPHARAPADAPAPAASPAAPSPSLARFFERLQLRIAGVALDDETALAKSARLSHTA ATFHLSGRPYLEADLLDATSRDAAALALTAADRFGQYGCSGFVLVRADAGLPVLAEFVLSCTVLGKQVEHGVLLALAQAA QRAALPAVALDYVRTDGNQPAVDFVDAIAAQAGVALDRSGPRARLRIAPCALAEAVLACAKAPQALAAAAQALDLAPLFS HSNATAHPAAHR
Specific function: Unknown
COG id: COG3882
COG function: function code Q; Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50217; Mature: 50086
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARRLYVGATFTASPLDPLLRARGFGDVAFARYNQLLQALVAPDPRHADDATLLLVRLA CCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH DFVRHEANDRTQSPDALAALLAQRADAWLDALASFAAGRARPPCIVVLPSPALDARGAAP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC ADTGRRLERALLGVPGLRALDWADFAASSAIAQPFDPIADKLGHVPLSIEGFAAFAQWLA CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHH ERLRGEAGEAAHAGKHGGDAAPAGANANPPARAEADAARAPAGAHANVDPHAAADIAAAT HHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHC GRAAAAHPGAEAAGPADAAAARAAVPPHARAPADAPAPAASPAAPSPSLARFFERLQLRI CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AGVALDDETALAKSARLSHTAATFHLSGRPYLEADLLDATSRDAAALALTAADRFGQYGC EEEEECCHHHHHHHHHHHHCEEEEEECCCCCCHHHHHCCCCCCHHHEEEHHHHHHHCCCC SGFVLVRADAGLPVLAEFVLSCTVLGKQVEHGVLLALAQAAQRAALPAVALDYVRTDGNQ CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCC PAVDFVDAIAAQAGVALDRSGPRARLRIAPCALAEAVLACAKAPQALAAAAQALDLAPLF CHHHHHHHHHHHHCCEECCCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SHSNATAHPAAHR CCCCCCCCCCCCC >Mature Secondary Structure SARRLYVGATFTASPLDPLLRARGFGDVAFARYNQLLQALVAPDPRHADDATLLLVRLA CCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH DFVRHEANDRTQSPDALAALLAQRADAWLDALASFAAGRARPPCIVVLPSPALDARGAAP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC ADTGRRLERALLGVPGLRALDWADFAASSAIAQPFDPIADKLGHVPLSIEGFAAFAQWLA CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHH ERLRGEAGEAAHAGKHGGDAAPAGANANPPARAEADAARAPAGAHANVDPHAAADIAAAT HHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHC GRAAAAHPGAEAAGPADAAAARAAVPPHARAPADAPAPAASPAAPSPSLARFFERLQLRI CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AGVALDDETALAKSARLSHTAATFHLSGRPYLEADLLDATSRDAAALALTAADRFGQYGC EEEEECCHHHHHHHHHHHHCEEEEEECCCCCCHHHHHCCCCCCHHHEEEHHHHHHHCCCC SGFVLVRADAGLPVLAEFVLSCTVLGKQVEHGVLLALAQAAQRAALPAVALDYVRTDGNQ CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCC PAVDFVDAIAAQAGVALDRSGPRARLRIAPCALAEAVLACAKAPQALAAAAQALDLAPLF CHHHHHHHHHHHHCCEECCCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SHSNATAHPAAHR CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA