| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126442479
Identifier: 126442479
GI number: 126442479
Start: 2365975
End: 2368623
Strand: Reverse
Name: 126442479
Synonym: BURPS668_A2448
Alternate gene names: NA
Gene position: 2368623-2365975 (Counterclockwise)
Preceding gene: 126445569
Following gene: 126443551
Centisome position: 75.74
GC content: 76.78
Gene sequence:
>2649_bases ATGACGCCTCGACTCCTTTCTTCGACGACGATCTTTGATGGCCTGCCGCGCGCGCGGCGCGCCGTCGCGCTCGCCGTGCT CGCGCTGGCCGGCGCGAGCGTCGCCTATGCGGCTCCGGATGCGGCGAGCGCCGCGTCCGCCGAGCAGGCCGCGCCGCTCA CGATCACCGTGCGGCCGGGCCAGTCGCTCAACGACATTGCCGTGGCCGTCACGCAATCGCACGATCCCGGCGTGCTGGCC CGCGCGGGCCGCGCGCTCTTCGACGCGAACCCGCAGGCGTTCATGAAGCGCGATCCGAGCCGCCTGAAGATCGGCGCGCA ATTGATGGTGCCGGCGCTCGACGCGACGGGGGGCGCGGCGGCGAGCGGCGCGACGGCGGCTTCGGCCGCTGCGTCGGCTG CGTCGACCTCGGCGGTGACGGGCGCGGCGCCGCATCCGTCGGCTTCGGCTTCGGCTTCGGCGCCGGCCGCGGCGTCGCGC CCGGCGGCGGCGGGCGCATCGCATGCCGCGACGGCGAGCGGCGCGGCGGCGTTCGCGGCTTCCGGCGTCGCCGCCGGTTC GGCCTCAGGGGCGAACGGCGCGTCGGCGCCCGGTGCGGCGTCGGCACATGCGCCGTCCGCGGTTGCGCCGGCGGCGCCGG TCGCCTCGTCCGGCGCCGGTAGCGCGCATGTCTGGAGCGGTTCGATTCAGCAGGCGCCGGCCGGCGCGAACGGCGCATCG GCCGCCGGCGCGGAAGCATTGCTCGCGCCCGGCGCGGCGAATCGCGCGCCGACGGGTTCGGGCGCGCAAGCGGCGGGCGC TTCGCAGGCGCGGCCGTCGAGCCTGCAGCAATTGCTCGCGCTGAAGAACCGCGTGTTGATGGAGTTGCAGAAGCACGGCA TCGGCAAGCCGGCCGCGAACGTCGCGCCGGCGCCGGCCGCCGGAAGTGCGCAGAAGCCGCAGGCGAGCGCCGCGGCCGGT GCCGCGGCGTCGGCGACGGCCGCGTCGACGACGGCCTCCGAGACCATCGCGTCCGACGCGGCGGCCGGATCGGCGGCGAG CGCCACGCCGGCGTCCGCCGCACCCGCGGCGTCGATGCCCGCCGCGGCGCCGAGCGTGAGCGCGCCGGCGCACGCGGCGG CGCCGCAGGCGCCGTTCAACACGGGCGCGGCGGTCGCGATCGGTGCGGCGCTCGCCGCGCTGATCGTGGGCTTCGCGTTG CGGCGACGCAAGAAGGGCGCGTCCGCCGACGCGATCGAACCGGGCGCGTTCACGCCGGCGCCCGCGCTCGATCCGGATGC GGCCGCCGCGATCGCCGACGCACCCGCCGGGCCGGAGGCGGCGGAGGACGCACGGCATGACGAGGCCGAGCCGGATAAGG CGGCTGCCGCGCGGCGCGCCTCAAGCGCCGCGCCGCTTGCCGAGGCGAAGCGCCCGCCGGCGCAGCATGGCTCGGAGCCG CCGTCGGCCGACGAGGACGCCGCGCCGGCTCGCGAGCCGCAAGCGCCGGCCGCGCAGCCGTTGACACTCAAGACCCCTCG GCCGGACGAGCAAGGCGGCGCGCCGCAATCGGCGGGCGACGAGCCGTCCGGCGCGCCGCGCACCGGCGCGAAGCCGGCGC CGTACGCATGGCGGCAGGCGTTTCCGAGCGACGCGATCGCGGCGCTCGACAGTCTCGACATGCCGCTGCCGCCGCGCGAA GCGGGGGCCACCGCGGATCGGCCGGAACAATCGCAACATGCGGAGCCAGCCGGTTCGCGCGGCGCGCAAAGCGCAACTAA CGGTCTGTCCGCCGCCCCTCCGCCGATGGGGGCGGAAAATGCGCGTGAAGGGCAGACGCACGGCGAAGCGGGAAGCGCGA CGGATTTTGAAGGGGCCGGATCATTCGGCAATGATGCTCGCGTCGCGCCGCAGCGGCCGGAAGGCGCGACGCCACGTCCC GTGACGGCGCCGGACGCGATGGGCCGAGACGAAGCGGCGGCGCGGGCGGCCGAGTCTTCGCCGACCGAATCGACGCGCGA TGCGCCGCGAACCCCGGGCGCGCCGGCGGCTGAATCCCGACTGTCCACGGCGGGGGCGGGCGCCGCGCATTCGCCGATGC CGGATGCGGCGGCCGCTGCCGAAGCAGCCGCGCCGCACGCGGCGCCGCCGCCCGATGCCGCGCCGCACGACGACGGGCAA ACGCAAGCCGCGCCGCGCCCGCTCGACGGCGGGCCGCAGCCTCCAGCCGCCGCGCGGCACGAAGCCGCGCCGGCGCACGC CGAAATACCGAACGCGCCGCTTGCCCCGGCGGCGCCGGCCTGGGCGGCCCCGCAATCGCCCGGCATGTCGTTTGCCGAGC CGGCGCAGGCCGAGCCGGGCGACGTCCCGGCCGCGCCGGACCGCGCGCCGGCCGCGAACCTGCCGCCGCTCGGCGTCGCG CAATTCGGCGCGCTGAACCTCGATTTCGATCTCGAGCTGCCGTCCGGCCCGAGCGCGTCGCTGCCGGCGTTCACGCCCGA GGCGCTCGCGAAGATCGCGCGCAACAAGCTCGAACTCGCGTCCGAATACGTCGAGCTCGGCGATCTGGCCGGCGCGCGCA CGCTGCTGCACGAAGTGATCGAAGCCGATCACGCCGACACGCGCGACGAAGCGCGCGTGATGCTCGCGAAACTCGCCGAT CTGTCGTGA
Upstream 100 bases:
>100_bases AAAGCGTCGCGTTTCACGCGACGCTTTTTTTATTTGCGGTCCGATTTTGTCTGAATCCAAACGCGAACCCAGGCCGCGTC ATGCCGCGGCGACCAAGCCG
Downstream 100 bases:
>100_bases TGAGAATCGCACTCGGCATTCAGTACGACGGCGCGGCGTTCTGCGGCTGGCAGTCGCAGCCCCACGGCAAGACGGTTCAG GACGCGCTCGAGCGCTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 882; Mature: 881
Protein sequence:
>882_residues MTPRLLSSTTIFDGLPRARRAVALAVLALAGASVAYAAPDAASAASAEQAAPLTITVRPGQSLNDIAVAVTQSHDPGVLA RAGRALFDANPQAFMKRDPSRLKIGAQLMVPALDATGGAAASGATAASAAASAASTSAVTGAAPHPSASASASAPAAASR PAAAGASHAATASGAAAFAASGVAAGSASGANGASAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGAS AAGAEALLAPGAANRAPTGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAANVAPAPAAGSAQKPQASAAAG AAASATAASTTASETIASDAAAGSAASATPASAAPAASMPAAAPSVSAPAHAAAPQAPFNTGAAVAIGAALAALIVGFAL RRRKKGASADAIEPGAFTPAPALDPDAAAAIADAPAGPEAAEDARHDEAEPDKAAAARRASSAAPLAEAKRPPAQHGSEP PSADEDAAPAREPQAPAAQPLTLKTPRPDEQGGAPQSAGDEPSGAPRTGAKPAPYAWRQAFPSDAIAALDSLDMPLPPRE AGATADRPEQSQHAEPAGSRGAQSATNGLSAAPPPMGAENAREGQTHGEAGSATDFEGAGSFGNDARVAPQRPEGATPRP VTAPDAMGRDEAAARAAESSPTESTRDAPRTPGAPAAESRLSTAGAGAAHSPMPDAAAAAEAAAPHAAPPPDAAPHDDGQ TQAAPRPLDGGPQPPAAARHEAAPAHAEIPNAPLAPAAPAWAAPQSPGMSFAEPAQAEPGDVPAAPDRAPAANLPPLGVA QFGALNLDFDLELPSGPSASLPAFTPEALAKIARNKLELASEYVELGDLAGARTLLHEVIEADHADTRDEARVMLAKLAD LS
Sequences:
>Translated_882_residues MTPRLLSSTTIFDGLPRARRAVALAVLALAGASVAYAAPDAASAASAEQAAPLTITVRPGQSLNDIAVAVTQSHDPGVLA RAGRALFDANPQAFMKRDPSRLKIGAQLMVPALDATGGAAASGATAASAAASAASTSAVTGAAPHPSASASASAPAAASR PAAAGASHAATASGAAAFAASGVAAGSASGANGASAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGAS AAGAEALLAPGAANRAPTGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAANVAPAPAAGSAQKPQASAAAG AAASATAASTTASETIASDAAAGSAASATPASAAPAASMPAAAPSVSAPAHAAAPQAPFNTGAAVAIGAALAALIVGFAL RRRKKGASADAIEPGAFTPAPALDPDAAAAIADAPAGPEAAEDARHDEAEPDKAAAARRASSAAPLAEAKRPPAQHGSEP PSADEDAAPAREPQAPAAQPLTLKTPRPDEQGGAPQSAGDEPSGAPRTGAKPAPYAWRQAFPSDAIAALDSLDMPLPPRE AGATADRPEQSQHAEPAGSRGAQSATNGLSAAPPPMGAENAREGQTHGEAGSATDFEGAGSFGNDARVAPQRPEGATPRP VTAPDAMGRDEAAARAAESSPTESTRDAPRTPGAPAAESRLSTAGAGAAHSPMPDAAAAAEAAAPHAAPPPDAAPHDDGQ TQAAPRPLDGGPQPPAAARHEAAPAHAEIPNAPLAPAAPAWAAPQSPGMSFAEPAQAEPGDVPAAPDRAPAANLPPLGVA QFGALNLDFDLELPSGPSASLPAFTPEALAKIARNKLELASEYVELGDLAGARTLLHEVIEADHADTRDEARVMLAKLAD LS >Mature_881_residues TPRLLSSTTIFDGLPRARRAVALAVLALAGASVAYAAPDAASAASAEQAAPLTITVRPGQSLNDIAVAVTQSHDPGVLAR AGRALFDANPQAFMKRDPSRLKIGAQLMVPALDATGGAAASGATAASAAASAASTSAVTGAAPHPSASASASAPAAASRP AAAGASHAATASGAAAFAASGVAAGSASGANGASAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGASA AGAEALLAPGAANRAPTGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAANVAPAPAAGSAQKPQASAAAGA AASATAASTTASETIASDAAAGSAASATPASAAPAASMPAAAPSVSAPAHAAAPQAPFNTGAAVAIGAALAALIVGFALR RRKKGASADAIEPGAFTPAPALDPDAAAAIADAPAGPEAAEDARHDEAEPDKAAAARRASSAAPLAEAKRPPAQHGSEPP SADEDAAPAREPQAPAAQPLTLKTPRPDEQGGAPQSAGDEPSGAPRTGAKPAPYAWRQAFPSDAIAALDSLDMPLPPREA GATADRPEQSQHAEPAGSRGAQSATNGLSAAPPPMGAENAREGQTHGEAGSATDFEGAGSFGNDARVAPQRPEGATPRPV TAPDAMGRDEAAARAAESSPTESTRDAPRTPGAPAAESRLSTAGAGAAHSPMPDAAAAAEAAAPHAAPPPDAAPHDDGQT QAAPRPLDGGPQPPAAARHEAAPAHAEIPNAPLAPAAPAWAAPQSPGMSFAEPAQAEPGDVPAAPDRAPAANLPPLGVAQ FGALNLDFDLELPSGPSASLPAFTPEALAKIARNKLELASEYVELGDLAGARTLLHEVIEADHADTRDEARVMLAKLADL S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84921; Mature: 84790
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRLLSSTTIFDGLPRARRAVALAVLALAGASVAYAAPDAASAASAEQAAPLTITVRPG CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCHHCCCCEEEEECCC QSLNDIAVAVTQSHDPGVLARAGRALFDANPQAFMKRDPSRLKIGAQLMVPALDATGGAA CCCCCEEEEEECCCCCCHHHHHCHHHHCCCHHHHHHCCHHHHEECCEEEEEECCCCCCCC ASGATAASAAASAASTSAVTGAAPHPSASASASAPAAASRPAAAGASHAATASGAAAFAA CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHH SGVAAGSASGANGASAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGAS HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHCCCCCCCCCC AAGAEALLAPGAANRAPTGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAAN CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VAPAPAAGSAQKPQASAAAGAAASATAASTTASETIASDAAAGSAASATPASAAPAASMP CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC AAAPSVSAPAHAAAPQAPFNTGAAVAIGAALAALIVGFALRRRKKGASADAIEPGAFTPA CCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PALDPDAAAAIADAPAGPEAAEDARHDEAEPDKAAAARRASSAAPLAEAKRPPAQHGSEP CCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHCCCCHHCCCCC PSADEDAAPAREPQAPAAQPLTLKTPRPDEQGGAPQSAGDEPSGAPRTGAKPAPYAWRQA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH FPSDAIAALDSLDMPLPPREAGATADRPEQSQHAEPAGSRGAQSATNGLSAAPPPMGAEN CCHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCC AREGQTHGEAGSATDFEGAGSFGNDARVAPQRPEGATPRPVTAPDAMGRDEAAARAAESS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC PTESTRDAPRTPGAPAAESRLSTAGAGAAHSPMPDAAAAAEAAAPHAAPPPDAAPHDDGQ CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC TQAAPRPLDGGPQPPAAARHEAAPAHAEIPNAPLAPAAPAWAAPQSPGMSFAEPAQAEPG CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVPAAPDRAPAANLPPLGVAQFGALNLDFDLELPSGPSASLPAFTPEALAKIARNKLELA CCCCCCCCCCCCCCCCCCHHHHCEEECEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH SEYVELGDLAGARTLLHEVIEADHADTRDEARVMLAKLADLS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TPRLLSSTTIFDGLPRARRAVALAVLALAGASVAYAAPDAASAASAEQAAPLTITVRPG CCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCHHCCCCEEEEECCC QSLNDIAVAVTQSHDPGVLARAGRALFDANPQAFMKRDPSRLKIGAQLMVPALDATGGAA CCCCCEEEEEECCCCCCHHHHHCHHHHCCCHHHHHHCCHHHHEECCEEEEEECCCCCCCC ASGATAASAAASAASTSAVTGAAPHPSASASASAPAAASRPAAAGASHAATASGAAAFAA CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHH SGVAAGSASGANGASAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGAS HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHCCCCCCCCCC AAGAEALLAPGAANRAPTGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAAN CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VAPAPAAGSAQKPQASAAAGAAASATAASTTASETIASDAAAGSAASATPASAAPAASMP CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC AAAPSVSAPAHAAAPQAPFNTGAAVAIGAALAALIVGFALRRRKKGASADAIEPGAFTPA CCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PALDPDAAAAIADAPAGPEAAEDARHDEAEPDKAAAARRASSAAPLAEAKRPPAQHGSEP CCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHCCCCHHCCCCC PSADEDAAPAREPQAPAAQPLTLKTPRPDEQGGAPQSAGDEPSGAPRTGAKPAPYAWRQA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH FPSDAIAALDSLDMPLPPREAGATADRPEQSQHAEPAGSRGAQSATNGLSAAPPPMGAEN CCHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCC AREGQTHGEAGSATDFEGAGSFGNDARVAPQRPEGATPRPVTAPDAMGRDEAAARAAESS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC PTESTRDAPRTPGAPAAESRLSTAGAGAAHSPMPDAAAAAEAAAPHAAPPPDAAPHDDGQ CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC TQAAPRPLDGGPQPPAAARHEAAPAHAEIPNAPLAPAAPAWAAPQSPGMSFAEPAQAEPG CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVPAAPDRAPAANLPPLGVAQFGALNLDFDLELPSGPSASLPAFTPEALAKIARNKLELA CCCCCCCCCCCCCCCCCCHHHHCEEECEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH SEYVELGDLAGARTLLHEVIEADHADTRDEARVMLAKLADLS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA