| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126442451
Identifier: 126442451
GI number: 126442451
Start: 1643617
End: 1643982
Strand: Reverse
Name: 126442451
Synonym: BURPS668_A1692
Alternate gene names: NA
Gene position: 1643982-1643617 (Counterclockwise)
Preceding gene: 126444987
Following gene: 126443322
Centisome position: 52.57
GC content: 59.29
Gene sequence:
>366_bases ATGACGAAAGGAACCCGACAGACGCACTCAGCGGCGTTCAAGGCGAAAGTGGCGCTGACTGCGGTCAAGGGCGAGCGCAC GCTGGCAGAACTGGCACAGCAGTTCGATGTGCATCCGAACCAGATCACGGAATGGAAACGGCAATTGCAGGAGCGTGCGG CGGACATGTTCGGCGCGGGCGCAGCGCCATCGTCGAACGAGCCACCGGTTGATCTGAAATCGCTGCATGCGAAAACCGGT CAACTGACGCTGGAAAATGATTTTTTAAGCGGCGCGCTCGACAAGGCGGGATTGCTGAGCGCAAAGAAATGCTCGACCGT AAGCACACGTTGCCGATTGCGCAGCAGGTCCGTCTCGTCGGCGTAG
Upstream 100 bases:
>100_bases GCGACGAGCTCACAGAGGTGGCCGCGCAAATTCGGACAATCGGATCAGTGGTTTGGCCGTGGCCTGAGCCGGCGATAATG CTGGCAAAGGAACCCGAGAA
Downstream 100 bases:
>100_bases CGAGATCGAGCGTGTATTACTGGCCACGGGCCGGTGAGCGCAGCGGATCAGTTGCTGATGCGACGGATTGACGAATTGCA CATGGAGTTTCCATTTGCCG
Product: transposase
Products: NA
Alternate protein names: Transposase IS3/IS; Transposase InsN For Insertion Sequence Element IS; Transposase And Inactivated Derivatives; IS3 Family Transposase OrfA; Transposase Subfamily; Transposase IS3 Family Protein; Transposase IS3/; IS3 Family Insertion Sequence Transposase Protein; Transposase IS3 Family
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTKGTRQTHSAAFKAKVALTAVKGERTLAELAQQFDVHPNQITEWKRQLQERAADMFGAGAAPSSNEPPVDLKSLHAKTG QLTLENDFLSGALDKAGLLSAKKCSTVSTRCRLRSRSVSSA
Sequences:
>Translated_121_residues MTKGTRQTHSAAFKAKVALTAVKGERTLAELAQQFDVHPNQITEWKRQLQERAADMFGAGAAPSSNEPPVDLKSLHAKTG QLTLENDFLSGALDKAGLLSAKKCSTVSTRCRLRSRSVSSA >Mature_120_residues TKGTRQTHSAAFKAKVALTAVKGERTLAELAQQFDVHPNQITEWKRQLQERAADMFGAGAAPSSNEPPVDLKSLHAKTGQ LTLENDFLSGALDKAGLLSAKKCSTVSTRCRLRSRSVSSA
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13025; Mature: 12894
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKGTRQTHSAAFKAKVALTAVKGERTLAELAQQFDVHPNQITEWKRQLQERAADMFGAG CCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC AAPSSNEPPVDLKSLHAKTGQLTLENDFLSGALDKAGLLSAKKCSTVSTRCRLRSRSVSS CCCCCCCCCCCHHHHHCCCCCEEECCCHHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCCC A C >Mature Secondary Structure TKGTRQTHSAAFKAKVALTAVKGERTLAELAQQFDVHPNQITEWKRQLQERAADMFGAG CCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC AAPSSNEPPVDLKSLHAKTGQLTLENDFLSGALDKAGLLSAKKCSTVSTRCRLRSRSVSS CCCCCCCCCCCHHHHHCCCCCEEECCCHHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA