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The map label for this gene is yneE [C]

Identifier: 126442445

GI number: 126442445

Start: 1327186

End: 1328094

Strand: Reverse

Name: yneE [C]

Synonym: BURPS668_A1417

Alternate gene names: 126442445

Gene position: 1328094-1327186 (Counterclockwise)

Preceding gene: 126443129

Following gene: 126445175

Centisome position: 42.47

GC content: 68.65

Gene sequence:

>909_bases
ATGATCGTCAGACCGCGCGAGCACGGGTTCCGGATGCTGTTCGTCTGGAACGGTTCGGTGCTCAAATCGATTCTGCCGCA
GCTTGCGCTGATGAGCGCCGTGAGCATCGTCGCGCTGCTGACGAACGGCCGCATTCTCGGCGAGAAGGTGCCGCTGAACC
CGACGCCGTTCACGCTCGCGGGCCTCGCGCTCGCGATCTTCGCCGCGTTTCGCAACAACGCGAGCTACGACCGCTACTGG
GAGGCGCGCAAGCTCTGGGGCGGCGTGCTGAGCGCGGCGCGCGCGCTGACCTCGCAGGCGCTCGGCTACGACGCGCTCGC
CGACGGCGCATCGTTCGCCCGCGCGACGGCGGGTTTCGTCTATGCGCTCAAGCACCAGTTGCGCGGCACGGACCCGACTC
ACGACCTGCGCCGCCGCCTGCCCGCCGACTGGCTCGATCCGGTGCTCGCCGCGCAGTTCCGCCCGGTCGCGATCCTGCAT
GCGTTGCGCGTGCGGCTGGCCGGCCGGCATCGCGACGGCGCGCTGACCGATGCGCAGCTGTGGATGCTCGACGCGCAGCT
CAACGAACTCGCCGCGAAACTGGCGGGCTGCGAGCGCATCGCATCGACGCCGATCCCGTTTCCCTATCACGTGCTGCTGC
ACCGGACTGTCTATGCGTATTGCGTGATGCTGCCGTTCGGGCTCGTCGACTCGATCGGCATCGCGACGCCGTTCGTATCG
GTGTTCGTGTCGTACACGCTGATCGCGCTCGACGCGATCGCGGGCGAGATCGCCGAGCCGTTCGGCGACGGGCCAAACCA
TCTCGCGCTCGATGCGCTGACACGGCAGATCGAGCGCTCGCTGTTCGAGCTGGCCGGCCTGCCGCTGCCTGACGAAATGC
GCGCCGGCCCGAATCACCGGCTGTCGTGA

Upstream 100 bases:

>100_bases
CGTGGGCGACGTCTGCAACACGCCGACGTCGAAGTCGATTCCGGTGCTGATGCACCGGTCGGCGGGCGACGCGGCGCACG
CGGCATGACGCGAGGCCCGC

Downstream 100 bases:

>100_bases
CGGCGGGCGGCGCACGCCGCCACGATCGCTGTCCTTCGCGGTCCGCCGCGAGTATTTGGCGATCGAATGAACGGACCGCG
CGCCACTCGCGCCGACATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MIVRPREHGFRMLFVWNGSVLKSILPQLALMSAVSIVALLTNGRILGEKVPLNPTPFTLAGLALAIFAAFRNNASYDRYW
EARKLWGGVLSAARALTSQALGYDALADGASFARATAGFVYALKHQLRGTDPTHDLRRRLPADWLDPVLAAQFRPVAILH
ALRVRLAGRHRDGALTDAQLWMLDAQLNELAAKLAGCERIASTPIPFPYHVLLHRTVYAYCVMLPFGLVDSIGIATPFVS
VFVSYTLIALDAIAGEIAEPFGDGPNHLALDALTRQIERSLFELAGLPLPDEMRAGPNHRLS

Sequences:

>Translated_302_residues
MIVRPREHGFRMLFVWNGSVLKSILPQLALMSAVSIVALLTNGRILGEKVPLNPTPFTLAGLALAIFAAFRNNASYDRYW
EARKLWGGVLSAARALTSQALGYDALADGASFARATAGFVYALKHQLRGTDPTHDLRRRLPADWLDPVLAAQFRPVAILH
ALRVRLAGRHRDGALTDAQLWMLDAQLNELAAKLAGCERIASTPIPFPYHVLLHRTVYAYCVMLPFGLVDSIGIATPFVS
VFVSYTLIALDAIAGEIAEPFGDGPNHLALDALTRQIERSLFELAGLPLPDEMRAGPNHRLS
>Mature_302_residues
MIVRPREHGFRMLFVWNGSVLKSILPQLALMSAVSIVALLTNGRILGEKVPLNPTPFTLAGLALAIFAAFRNNASYDRYW
EARKLWGGVLSAARALTSQALGYDALADGASFARATAGFVYALKHQLRGTDPTHDLRRRLPADWLDPVLAAQFRPVAILH
ALRVRLAGRHRDGALTDAQLWMLDAQLNELAAKLAGCERIASTPIPFPYHVLLHRTVYAYCVMLPFGLVDSIGIATPFVS
VFVSYTLIALDAIAGEIAEPFGDGPNHLALDALTRQIERSLFELAGLPLPDEMRAGPNHRLS

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=302, Percent_Identity=43.7086092715232, Blast_Score=219, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 33038; Mature: 33038

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRPREHGFRMLFVWNGSVLKSILPQLALMSAVSIVALLTNGRILGEKVPLNPTPFTLA
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHH
GLALAIFAAFRNNASYDRYWEARKLWGGVLSAARALTSQALGYDALADGASFARATAGFV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
YALKHQLRGTDPTHDLRRRLPADWLDPVLAAQFRPVAILHALRVRLAGRHRDGALTDAQL
HHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHH
WMLDAQLNELAAKLAGCERIASTPIPFPYHVLLHRTVYAYCVMLPFGLVDSIGIATPFVS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFVSYTLIALDAIAGEIAEPFGDGPNHLALDALTRQIERSLFELAGLPLPDEMRAGPNHR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
LS
CC
>Mature Secondary Structure
MIVRPREHGFRMLFVWNGSVLKSILPQLALMSAVSIVALLTNGRILGEKVPLNPTPFTLA
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHH
GLALAIFAAFRNNASYDRYWEARKLWGGVLSAARALTSQALGYDALADGASFARATAGFV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
YALKHQLRGTDPTHDLRRRLPADWLDPVLAAQFRPVAILHALRVRLAGRHRDGALTDAQL
HHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHH
WMLDAQLNELAAKLAGCERIASTPIPFPYHVLLHRTVYAYCVMLPFGLVDSIGIATPFVS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFVSYTLIALDAIAGEIAEPFGDGPNHLALDALTRQIERSLFELAGLPLPDEMRAGPNHR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
LS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]