| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126442439
Identifier: 126442439
GI number: 126442439
Start: 1766071
End: 1767369
Strand: Reverse
Name: 126442439
Synonym: BURPS668_A1808
Alternate gene names: NA
Gene position: 1767369-1766071 (Counterclockwise)
Preceding gene: 126443580
Following gene: 126445471
Centisome position: 56.51
GC content: 75.44
Gene sequence:
>1299_bases ATGCATGTACTCGTCGTCGGAGCAGGAATCGCCGGGCTCGCCGCCGCCTGGCAATTGAAACGGGGCGGATGCGACGTGAC CGTCGTCGAGGCCGCCGAACGCGCGGGCGGCCGCATTCGCAGCGCGCCGTTCCACGGCCATGTGATCGAATGCGGCGCGC AGTTTCCGTCCTCCGGCTATCGGCACTTGATGCCGCTCTTCGGCGAGGCGGGGCTCGATGCGCAACTCGTGAAGACCTCG CCGTGGGCGGCGTTCGAGCATCGCGGGCGGCTTTTTCGCGTGCATGCGCGGCGGCCGTGGACGATCCCCGCGAGCGGCCT GCTCGGCTGGCGCGACAGCGTGCGCGTGAGCCGGGCGCGCGCCGCGCTGCTCGCGCGGGTTCGCGCGCTCGATCCGAACC GCTATGCGGCGTTCGCGGAATTCGACGACGCCGACGCGGCGCACTGGGCGGAACGCGCGTTCGGGCGCGCGGCGGTCGAC GCGATCTTCGCGCCGATGATTCACGGGCTGTATTTCCAGCCGCTGCGCGGCGCGTCACGCGCGCTGCTCGCGGCCGTCAC CGGCTTCGACGGCGCGGATACGCTCGCGGTCGCGGGCGGCTGGCAGACGCTGCCCGTCGCGCTCGCGGCCCGGCTCGACG TGCGCTACGGCACGCGGGTCGATGCGCTGTCGGCGCACGCGAACGGCGTCGACGCGTGCGTCGGCGATCGCGCGCTGCGT TTCGACGCGGCGATCGTCGCGACGCCCGCGACCGTCGCGCGCCGCCTCTGGCGCGGGCAGACCGACGCGCAGCGCGCGCT GCTCGCGACGGGCTATGCACGCTGCGCGCACGTCGCGTTCGGCCTCGCGCCGGGCTGGCGCGCGCCCGCGCGGCTGCGCC GCGTGTACGGCGCGCTGCTGTCGCCGCACGCGCGACGCGTCGCGGCGCTCACGTTCGAGCGCGGGCGCGGGATCGGCGAC GGGCAGGGCGAGGTCGTATCGGCGATGCTCGGGCATGCGGGCGCGAGCGCGCTGCGCTATGCATCGGACGACGAGATCGC GCGCGTCGCGCTCGACGACCTGCGCACGCTGTTGCCGGGCGTCGCCGAGGCGGTCGTCGCGACGCGCGTGCAGCGCTGGG ACGAGGCCGAGCCGCTGTCGCCCGTCGGCCGCGCGCGCGCGATCGCCGCATACCGCGCGAGCATCGACGCGCGCCCGCGC GTGCTGCTCGCGGGCGACTACATGGGCTCGCCGTGGACCGACGGCGCGGCGGAGACGGGCAGATGGGCGGCGCGCAGGCT GCTCGACGCGCGCGCATGA
Upstream 100 bases:
>100_bases CCGTTCGTGTCGTTCTTGCCATGAAAACGTACAGGCTTTGTATGGTCCGATCGTGGCGGCTATTGTACGGCCTCGTTCAA CCCTCGTCGCCGCGCTCGCC
Downstream 100 bases:
>100_bases GACGATTGGCCGCAGCGGCGCGCGGGCCGCTTCGCCATCTGATTGGCGCGATGCCCCGAATCGCAATCGGCTTGCCCGAG CCGATGCCGATGCCGATTTC
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MHVLVVGAGIAGLAAAWQLKRGGCDVTVVEAAERAGGRIRSAPFHGHVIECGAQFPSSGYRHLMPLFGEAGLDAQLVKTS PWAAFEHRGRLFRVHARRPWTIPASGLLGWRDSVRVSRARAALLARVRALDPNRYAAFAEFDDADAAHWAERAFGRAAVD AIFAPMIHGLYFQPLRGASRALLAAVTGFDGADTLAVAGGWQTLPVALAARLDVRYGTRVDALSAHANGVDACVGDRALR FDAAIVATPATVARRLWRGQTDAQRALLATGYARCAHVAFGLAPGWRAPARLRRVYGALLSPHARRVAALTFERGRGIGD GQGEVVSAMLGHAGASALRYASDDEIARVALDDLRTLLPGVAEAVVATRVQRWDEAEPLSPVGRARAIAAYRASIDARPR VLLAGDYMGSPWTDGAAETGRWAARRLLDARA
Sequences:
>Translated_432_residues MHVLVVGAGIAGLAAAWQLKRGGCDVTVVEAAERAGGRIRSAPFHGHVIECGAQFPSSGYRHLMPLFGEAGLDAQLVKTS PWAAFEHRGRLFRVHARRPWTIPASGLLGWRDSVRVSRARAALLARVRALDPNRYAAFAEFDDADAAHWAERAFGRAAVD AIFAPMIHGLYFQPLRGASRALLAAVTGFDGADTLAVAGGWQTLPVALAARLDVRYGTRVDALSAHANGVDACVGDRALR FDAAIVATPATVARRLWRGQTDAQRALLATGYARCAHVAFGLAPGWRAPARLRRVYGALLSPHARRVAALTFERGRGIGD GQGEVVSAMLGHAGASALRYASDDEIARVALDDLRTLLPGVAEAVVATRVQRWDEAEPLSPVGRARAIAAYRASIDARPR VLLAGDYMGSPWTDGAAETGRWAARRLLDARA >Mature_432_residues MHVLVVGAGIAGLAAAWQLKRGGCDVTVVEAAERAGGRIRSAPFHGHVIECGAQFPSSGYRHLMPLFGEAGLDAQLVKTS PWAAFEHRGRLFRVHARRPWTIPASGLLGWRDSVRVSRARAALLARVRALDPNRYAAFAEFDDADAAHWAERAFGRAAVD AIFAPMIHGLYFQPLRGASRALLAAVTGFDGADTLAVAGGWQTLPVALAARLDVRYGTRVDALSAHANGVDACVGDRALR FDAAIVATPATVARRLWRGQTDAQRALLATGYARCAHVAFGLAPGWRAPARLRRVYGALLSPHARRVAALTFERGRGIGD GQGEVVSAMLGHAGASALRYASDDEIARVALDDLRTLLPGVAEAVVATRVQRWDEAEPLSPVGRARAIAAYRASIDARPR VLLAGDYMGSPWTDGAAETGRWAARRLLDARA
Specific function: Unknown
COG id: COG1232
COG function: function code H; Protoporphyrinogen oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46100; Mature: 46100
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVLVVGAGIAGLAAAWQLKRGGCDVTVVEAAERAGGRIRSAPFHGHVIECGAQFPSSGY CEEEEEECCHHHHHHHHHHHCCCCCEEEEEHHHHCCCCEECCCCCCCEEEECCCCCCCCH RHLMPLFGEAGLDAQLVKTSPWAAFEHRGRLFRVHARRPWTIPASGLLGWRDSVRVSRAR HHHHHHHCCCCCCCEEEECCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH AALLARVRALDPNRYAAFAEFDDADAAHWAERAFGRAAVDAIFAPMIHGLYFQPLRGASR HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ALLAAVTGFDGADTLAVAGGWQTLPVALAARLDVRYGTRVDALSAHANGVDACVGDRALR HHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHCCCHHE FDAAIVATPATVARRLWRGQTDAQRALLATGYARCAHVAFGLAPGWRAPARLRRVYGALL ECHHEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SPHARRVAALTFERGRGIGDGQGEVVSAMLGHAGASALRYASDDEIARVALDDLRTLLPG CCHHHHHHHEEHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHH VAEAVVATRVQRWDEAEPLSPVGRARAIAAYRASIDARPRVLLAGDYMGSPWTDGAAETG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHH RWAARRLLDARA HHHHHHHHHCCC >Mature Secondary Structure MHVLVVGAGIAGLAAAWQLKRGGCDVTVVEAAERAGGRIRSAPFHGHVIECGAQFPSSGY CEEEEEECCHHHHHHHHHHHCCCCCEEEEEHHHHCCCCEECCCCCCCEEEECCCCCCCCH RHLMPLFGEAGLDAQLVKTSPWAAFEHRGRLFRVHARRPWTIPASGLLGWRDSVRVSRAR HHHHHHHCCCCCCCEEEECCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH AALLARVRALDPNRYAAFAEFDDADAAHWAERAFGRAAVDAIFAPMIHGLYFQPLRGASR HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ALLAAVTGFDGADTLAVAGGWQTLPVALAARLDVRYGTRVDALSAHANGVDACVGDRALR HHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHCCCHHE FDAAIVATPATVARRLWRGQTDAQRALLATGYARCAHVAFGLAPGWRAPARLRRVYGALL ECHHEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SPHARRVAALTFERGRGIGDGQGEVVSAMLGHAGASALRYASDDEIARVALDDLRTLLPG CCHHHHHHHEEHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHH VAEAVVATRVQRWDEAEPLSPVGRARAIAAYRASIDARPRVLLAGDYMGSPWTDGAAETG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHH RWAARRLLDARA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA