| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126442438
Identifier: 126442438
GI number: 126442438
Start: 1306931
End: 1308079
Strand: Reverse
Name: 126442438
Synonym: BURPS668_A1398
Alternate gene names: NA
Gene position: 1308079-1306931 (Counterclockwise)
Preceding gene: 126443445
Following gene: 126444703
Centisome position: 41.83
GC content: 71.11
Gene sequence:
>1149_bases ATGTCGAAGTCCCCCGCTTTTTGGGAGCCGTATTGCCATCGCTCGGAGGCGGAATTCCATTTGTCGAATTTCGCCGCGCG GGTGCTCGGGCGCCATGCCGGCGTCGTGTTCTTCGACGGCATCGACGCGGCCCGCCTCAAGCAGGCGATTCCCGATGCGC ACGGCGACACGCTGGATCTCGTGGCGGCCGTCGTCAGGCCGCCGCTCATGCCGATCGAGCCTGCCGAGACGCTCGACGCG CTGACGCTCGAGCAGCTCTCGCGCGAATGGGAACGCCGCATCGCGGCAAGCGCGCCGTCGGCGCGGCCGCCCCTGCCGGC GCAAGGCGTCGCGCACGCGCGGCGCTTCATCGACGCGCCCAAGACCGCGTTCGACGCCGCCGCCGTCGGCGATACGTTCG GCGTGCTGGCCGGCGCCGTGTCGATCGTGGCGATCGTCGGCGGCGGCATCGCGCTCGCGCCGGTGCTCGGCGCGGCGGCG GGCGCGGCGTCGCTGCTCCTGCTCGCCGAAGACAGCTCGATGCTGCGCTACGAACTCAAGGGCGACGAGGTGCGCAAGAA AAAGCTCGAGACATCGTGGCATTGCAAACTGGTCGAGACCGTCGGGCCGCTGCTCGTGCTGCCCGAGCTGGCGGTCGGCG GCACGCAAGCGCTCGCGTCGCTGCCGAAGGCCGCGCGGCAAGCCGGCGAAGCCGCCGAGGAAACGGCCCAGGCGGCGCAG CGGCTCGCGACGCAACGCCATGCGTTCGACGCATTCAAGCGCGCCTCGCTCGACAATCCGGACCGCGCGGCGCGGCGAAC GGGACTGCACGCGATGCGGACCGAAACGAGCGGCCTCGCGGCCGGCGTGCGTCGCGCGCGGCAAAAGATGCTGGCTGCCC GGCGAGAATTGCTGCTGCTTCGCACCATCGAAGCACCCGCCTATCTCGCCTCGCTCTACGGCGCGGGCGTCCACGGCATG GACCCGCCCGAAGGCGGGTCCCGAAGCACGGACTGGCTGCGGCATCGGATGGACGCACAGTCGTCCGGCGATCCCGATCA CCCGGCGCATCTGCTGATTCCGCGGCATCCGGCCGTCGACGGTTCGAACGGCGCGCCCGCGATGCAGCTTCACGTGGCGG TCGGCCATCGTCCGGAAGCGGCGACATGA
Upstream 100 bases:
>100_bases CATGCGCGGCGGATTATATTGACGCCGCGCGACGCCGATGATTATCGGGTTATCCGACAACGGAATCCTCCTTTACTCGA ATACGGAATACGCGAAGACC
Downstream 100 bases:
>100_bases CGCCTCTCGCGCCGCGCGGCGCCGGCCGCCCGACCGCTCGCGCCGAGCGCCCCGGCGATGACCGCCCGGCGCGCCGCGCC GGGCGGTCATCGCGGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDLVAAVVRPPLMPIEPAETLDA LTLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAPKTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAA GAASLLLLAEDSSMLRYELKGDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTQALASLPKAARQAGEAAEETAQAAQ RLATQRHAFDAFKRASLDNPDRAARRTGLHAMRTETSGLAAGVRRARQKMLAARRELLLLRTIEAPAYLASLYGAGVHGM DPPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPAVDGSNGAPAMQLHVAVGHRPEAAT
Sequences:
>Translated_382_residues MSKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDLVAAVVRPPLMPIEPAETLDA LTLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAPKTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAA GAASLLLLAEDSSMLRYELKGDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTQALASLPKAARQAGEAAEETAQAAQ RLATQRHAFDAFKRASLDNPDRAARRTGLHAMRTETSGLAAGVRRARQKMLAARRELLLLRTIEAPAYLASLYGAGVHGM DPPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPAVDGSNGAPAMQLHVAVGHRPEAAT >Mature_381_residues SKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDLVAAVVRPPLMPIEPAETLDAL TLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAPKTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAAG AASLLLLAEDSSMLRYELKGDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTQALASLPKAARQAGEAAEETAQAAQR LATQRHAFDAFKRASLDNPDRAARRTGLHAMRTETSGLAAGVRRARQKMLAARRELLLLRTIEAPAYLASLYGAGVHGMD PPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPAVDGSNGAPAMQLHVAVGHRPEAAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40510; Mature: 40378
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDL CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCHHHH VAAVVRPPLMPIEPAETLDALTLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAP HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC KTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAAGAASLLLLAEDSSMLRYELK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCEEEEECC GDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTQALASLPKAARQAGEAAEETAQAAQ CHHHHHHHCCCHHHEEEHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLATQRHAFDAFKRASLDNPDRAARRTGLHAMRTETSGLAAGVRRARQKMLAARRELLLL HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTIEAPAYLASLYGAGVHGMDPPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPAVD HHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC GSNGAPAMQLHVAVGHRPEAAT CCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure SKSPAFWEPYCHRSEAEFHLSNFAARVLGRHAGVVFFDGIDAARLKQAIPDAHGDTLDL CCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCHHHH VAAVVRPPLMPIEPAETLDALTLEQLSREWERRIAASAPSARPPLPAQGVAHARRFIDAP HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC KTAFDAAAVGDTFGVLAGAVSIVAIVGGGIALAPVLGAAAGAASLLLLAEDSSMLRYELK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCEEEEECC GDEVRKKKLETSWHCKLVETVGPLLVLPELAVGGTQALASLPKAARQAGEAAEETAQAAQ CHHHHHHHCCCHHHEEEHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLATQRHAFDAFKRASLDNPDRAARRTGLHAMRTETSGLAAGVRRARQKMLAARRELLLL HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTIEAPAYLASLYGAGVHGMDPPEGGSRSTDWLRHRMDAQSSGDPDHPAHLLIPRHPAVD HHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC GSNGAPAMQLHVAVGHRPEAAT CCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA