| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yeeE [H]
Identifier: 126209500
GI number: 126209500
Start: 2273448
End: 2274440
Strand: Reverse
Name: yeeE [H]
Synonym: APL_2046
Alternate gene names: 126209500
Gene position: 2274440-2273448 (Counterclockwise)
Preceding gene: NA
Following gene: 126209499
Centisome position: 100.0
GC content: 44.41
Gene sequence:
>993_bases ATGCTTATTTCCGGTTTTTTTGTCGGGCTATTGCTCGGTATCATTTTACAACGCGGACAATTTTGCCTTTCGGGACAACT TCGCCAAGTTGCATTTAAACGAGATTTTACTTCGTTTTCTCCACTTTTAACCGCCATCTCCGTACAATCTATCGGTTTCT ATCTGTTAGAGCAGCAAGGCGTTATTCGTTTTCCAAGCTCACCAATGCCGATTCTCGCTACTCTACTCGGTGCATTTTTA TTCGGCATCGGGATGGGAGTCGCCAATCGTTGTGTTTCGGGACAATTATATAGAGCAGGAGAAGGTATGATCGCTGCGAT GATCACCTTATTCGTTTTTGCCGTTACTACTGTAGCTACCCAAACCGGCGTATTAAAATTTTGGGTTGCATCGCAACTTG AAACGGAAAGCAAGCTCATTACCGTACCGCAAACATTAAGGATTTCCAGCCTTTGGTTCATCATTCCGCTTAGCTTAATT GCGACTTGGGGGTTGCAAAAAAGCCGCAAAATTCAACCGCTTATTCCTCGTAAACCTTTTGGTCAATTTTGGTCACCCCA CTTTACGGCTATTTTACTTGGCTTAGTCAGTATTTTAGCTTGGGTTTTAAGCGCAGAAACCGGCAGAGAATTCGGACTGA GCTTCAGTATTCCGGTCGGTCATGCTTTGCAATATTTAACCCTTGGGCAACAACGTTACTTAAATTGGGGAACTTATCTC ATTATCGGATTGGTACTCGGTTCATTTCTTTCCGCTAAGTTTTCCGGCAATTTCCGTTGGAAAGCATTGTCTGCGACAGA TTTCGGTAAAAGTGTCGCCGGAGGCATACTTATGGGTATCGGTGCCTCGCTAACCGGCGGTTGTACGATGGCAAATGCGG TAGTCGGTACCGCTTATTTCTCTTGGCAAGGGTGGATTGCAACTATCGTTATGATGTTTGGCGTGTGGTGCGTGTTCATT CTTCGCAAAAATCCTTTAGAATCTACTTGTTAG
Upstream 100 bases:
>100_bases TTTCTGTGTTATAGATCACATATTTTTAACAAATTCCTACCGCTTACTGATTTTCATCTTTATAATAAACATATTTTTCA CATAGTTTAAGGTTTAATCT
Downstream 100 bases:
>100_bases GAGTATTCATGAAACTAAAATTATCCGCTTTAGCGGTGGCTCTCAGCTTGCTTGCAGGCTGTAACGAACAAAAAATCGGT GAAATCTCACAAACGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MLISGFFVGLLLGIILQRGQFCLSGQLRQVAFKRDFTSFSPLLTAISVQSIGFYLLEQQGVIRFPSSPMPILATLLGAFL FGIGMGVANRCVSGQLYRAGEGMIAAMITLFVFAVTTVATQTGVLKFWVASQLETESKLITVPQTLRISSLWFIIPLSLI ATWGLQKSRKIQPLIPRKPFGQFWSPHFTAILLGLVSILAWVLSAETGREFGLSFSIPVGHALQYLTLGQQRYLNWGTYL IIGLVLGSFLSAKFSGNFRWKALSATDFGKSVAGGILMGIGASLTGGCTMANAVVGTAYFSWQGWIATIVMMFGVWCVFI LRKNPLESTC
Sequences:
>Translated_330_residues MLISGFFVGLLLGIILQRGQFCLSGQLRQVAFKRDFTSFSPLLTAISVQSIGFYLLEQQGVIRFPSSPMPILATLLGAFL FGIGMGVANRCVSGQLYRAGEGMIAAMITLFVFAVTTVATQTGVLKFWVASQLETESKLITVPQTLRISSLWFIIPLSLI ATWGLQKSRKIQPLIPRKPFGQFWSPHFTAILLGLVSILAWVLSAETGREFGLSFSIPVGHALQYLTLGQQRYLNWGTYL IIGLVLGSFLSAKFSGNFRWKALSATDFGKSVAGGILMGIGASLTGGCTMANAVVGTAYFSWQGWIATIVMMFGVWCVFI LRKNPLESTC >Mature_330_residues MLISGFFVGLLLGIILQRGQFCLSGQLRQVAFKRDFTSFSPLLTAISVQSIGFYLLEQQGVIRFPSSPMPILATLLGAFL FGIGMGVANRCVSGQLYRAGEGMIAAMITLFVFAVTTVATQTGVLKFWVASQLETESKLITVPQTLRISSLWFIIPLSLI ATWGLQKSRKIQPLIPRKPFGQFWSPHFTAILLGLVSILAWVLSAETGREFGLSFSIPVGHALQYLTLGQQRYLNWGTYL IIGLVLGSFLSAKFSGNFRWKALSATDFGKSVAGGILMGIGASLTGGCTMANAVVGTAYFSWQGWIATIVMMFGVWCVFI LRKNPLESTC
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
Organism=Escherichia coli, GI1788323, Length=327, Percent_Identity=37.9204892966361, Blast_Score=230, Evalue=9e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 35967; Mature: 35967
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISGFFVGLLLGIILQRGQFCLSGQLRQVAFKRDFTSFSPLLTAISVQSIGFYLLEQQG CEEHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCC VIRFPSSPMPILATLLGAFLFGIGMGVANRCVSGQLYRAGEGMIAAMITLFVFAVTTVAT EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHH QTGVLKFWVASQLETESKLITVPQTLRISSLWFIIPLSLIATWGLQKSRKIQPLIPRKPF HHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GQFWSPHFTAILLGLVSILAWVLSAETGREFGLSFSIPVGHALQYLTLGQQRYLNWGTYL CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCHHHHHHHHHHCHHHHHHHHHHH IIGLVLGSFLSAKFSGNFRWKALSATDFGKSVAGGILMGIGASLTGGCTMANAVVGTAYF HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH SWQGWIATIVMMFGVWCVFILRKNPLESTC HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLISGFFVGLLLGIILQRGQFCLSGQLRQVAFKRDFTSFSPLLTAISVQSIGFYLLEQQG CEEHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCC VIRFPSSPMPILATLLGAFLFGIGMGVANRCVSGQLYRAGEGMIAAMITLFVFAVTTVAT EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHH QTGVLKFWVASQLETESKLITVPQTLRISSLWFIIPLSLIATWGLQKSRKIQPLIPRKPF HHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GQFWSPHFTAILLGLVSILAWVLSAETGREFGLSFSIPVGHALQYLTLGQQRYLNWGTYL CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCHHHHHHHHHHCHHHHHHHHHHH IIGLVLGSFLSAKFSGNFRWKALSATDFGKSVAGGILMGIGASLTGGCTMANAVVGTAYF HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH SWQGWIATIVMMFGVWCVFILRKNPLESTC HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]