| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is hisB [H]
Identifier: 126209477
GI number: 126209477
Start: 2250366
End: 2251457
Strand: Direct
Name: hisB [H]
Synonym: APL_2023
Alternate gene names: 126209477
Gene position: 2250366-2251457 (Clockwise)
Preceding gene: 126209476
Following gene: 126209478
Centisome position: 98.94
GC content: 47.16
Gene sequence:
>1092_bases ATGACACAACCAACCCTATTCATCGACCGTGACGGCACTTTGATTGACGAACCGAAAACCGATTTCCAAATTGATAGCTT GGAGAAACTCAAACTGGAACGCAATGTGATTCCTGCATTGCTGAAATTAAAAGATCACTACCGTTTTGTGATGGTCAGCA ATCAGGACGGTTTAGGCACCAGCTCATTTCCGCAAGAGACCTTCGACAAACCGCACAATGCCATGATGGAACTGTTCCGC TCGCAAGGCATTGAGTTTGATGAAGTGCTAATTTGCCCACACAAGCCTGAAGACAACTGCGATTGTCGCAAACCGAAAAC CAAACTATTACAAAAATATATCGACCGTGAACTGTTCGATCCTGCCACCAGTTTTGTCATCGGCGACCGTGCAACAGACG TTCAGTTAGCGGAAAATCTTGGTATTCGTGCTTTGCAATATCACCCTGAAAAATTAAATTGGGATTTAATTGCGGAAAAA CTGCTGGGCGAAGCCGTGACTAATATCGGCGACCGCCAACCACGCTATGCGGAAGTGGTACGCAAAACCAAAGAGACCGA CATCAAAGTGCAAGTGTGGCTGGACGAAACCGGCGTGAACGACATCAAAACGGGCGTAGGCTTTTTCGACCATATGCTCG ACCAAATTGCCACCCACGGCGGTTTCCGTATGAACATCTCGTGCAAAGGCGACCTATGGATTGACGAACATCACACGGTT GAAGACACCGCCCTTGCCCTCGGTACTGCCTTAAAACAAGCCATCGGCGACAAACGCGGCATTGCCCGCTTTGGTTTTGT GCTACCAATGGACGAATGCCAAGCTCAATGTGCCATGGATTTATCCGGCAGACCGTTTATTAAATTCAAAGCGGAATTTA AACGCGATAAAGTCGGCGACTTTAGCACCGAATTGACGGAGCATTTCTTCCAATCCATCGCTTTCACGATGCTTGCCACC TTGCATATCAAAGCCAAAGGCGACAATGACCACCACAAAATCGAAAGCCTGTTTAAAGTATTCGGCAGAACCTTACGACA AGCCATTCGCATTGAAGGGAATGAATTGCCGAGTTCGAAAGGGGTTTTATAA
Upstream 100 bases:
>100_bases CCAGCCACGCTGTGGCTGATAATTAGATAATATAGAGCCGCAGGGCGGCTCGGATTAAGTAGCCCCATACGGCTCGTATG GGGGGATCACAGGAGCAAAC
Downstream 100 bases:
>100_bases TCGGAAAATTGTAGGGCGTACTCGTACTACGTACGCCCCAAAGTGCGGTTAATTTTTGCAAGGCTTTTTGGGAAAGTGGT CGCTTGTAAAACGGTATGAT
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTQPTLFIDRDGTLIDEPKTDFQIDSLEKLKLERNVIPALLKLKDHYRFVMVSNQDGLGTSSFPQETFDKPHNAMMELFR SQGIEFDEVLICPHKPEDNCDCRKPKTKLLQKYIDRELFDPATSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEK LLGEAVTNIGDRQPRYAEVVRKTKETDIKVQVWLDETGVNDIKTGVGFFDHMLDQIATHGGFRMNISCKGDLWIDEHHTV EDTALALGTALKQAIGDKRGIARFGFVLPMDECQAQCAMDLSGRPFIKFKAEFKRDKVGDFSTELTEHFFQSIAFTMLAT LHIKAKGDNDHHKIESLFKVFGRTLRQAIRIEGNELPSSKGVL
Sequences:
>Translated_363_residues MTQPTLFIDRDGTLIDEPKTDFQIDSLEKLKLERNVIPALLKLKDHYRFVMVSNQDGLGTSSFPQETFDKPHNAMMELFR SQGIEFDEVLICPHKPEDNCDCRKPKTKLLQKYIDRELFDPATSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEK LLGEAVTNIGDRQPRYAEVVRKTKETDIKVQVWLDETGVNDIKTGVGFFDHMLDQIATHGGFRMNISCKGDLWIDEHHTV EDTALALGTALKQAIGDKRGIARFGFVLPMDECQAQCAMDLSGRPFIKFKAEFKRDKVGDFSTELTEHFFQSIAFTMLAT LHIKAKGDNDHHKIESLFKVFGRTLRQAIRIEGNELPSSKGVL >Mature_362_residues TQPTLFIDRDGTLIDEPKTDFQIDSLEKLKLERNVIPALLKLKDHYRFVMVSNQDGLGTSSFPQETFDKPHNAMMELFRS QGIEFDEVLICPHKPEDNCDCRKPKTKLLQKYIDRELFDPATSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEKL LGEAVTNIGDRQPRYAEVVRKTKETDIKVQVWLDETGVNDIKTGVGFFDHMLDQIATHGGFRMNISCKGDLWIDEHHTVE DTALALGTALKQAIGDKRGIARFGFVLPMDECQAQCAMDLSGRPFIKFKAEFKRDKVGDFSTELTEHFFQSIAFTMLATL HIKAKGDNDHHKIESLFKVFGRTLRQAIRIEGNELPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=364, Percent_Identity=66.4835164835165, Blast_Score=511, Evalue=1e-146, Organism=Escherichia coli, GI1786399, Length=152, Percent_Identity=30.9210526315789, Blast_Score=75, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6324776, Length=171, Percent_Identity=43.859649122807, Blast_Score=154, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P [H]
EC number: =3.1.3.15; =4.2.1.19 [H]
Molecular weight: Translated: 41285; Mature: 41154
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPTLFIDRDGTLIDEPKTDFQIDSLEKLKLERNVIPALLKLKDHYRFVMVSNQDGLGT CCCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC SSFPQETFDKPHNAMMELFRSQGIEFDEVLICPHKPEDNCDCRKPKTKLLQKYIDRELFD CCCCHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC PATSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEKLLGEAVTNIGDRQPRYAEVV CHHHEEECCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH RKTKETDIKVQVWLDETGVNDIKTGVGFFDHMLDQIATHGGFRMNISCKGDLWIDEHHTV HHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCH EDTALALGTALKQAIGDKRGIARFGFVLPMDECQAQCAMDLSGRPFIKFKAEFKRDKVGD HHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCC FSTELTEHFFQSIAFTMLATLHIKAKGDNDHHKIESLFKVFGRTLRQAIRIEGNELPSSK HHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GVL CCC >Mature Secondary Structure TQPTLFIDRDGTLIDEPKTDFQIDSLEKLKLERNVIPALLKLKDHYRFVMVSNQDGLGT CCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC SSFPQETFDKPHNAMMELFRSQGIEFDEVLICPHKPEDNCDCRKPKTKLLQKYIDRELFD CCCCHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC PATSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEKLLGEAVTNIGDRQPRYAEVV CHHHEEECCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH RKTKETDIKVQVWLDETGVNDIKTGVGFFDHMLDQIATHGGFRMNISCKGDLWIDEHHTV HHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCH EDTALALGTALKQAIGDKRGIARFGFVLPMDECQAQCAMDLSGRPFIKFKAEFKRDKVGD HHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCC FSTELTEHFFQSIAFTMLATLHIKAKGDNDHHKIESLFKVFGRTLRQAIRIEGNELPSSK HHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GVL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA