| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is srmB [H]
Identifier: 126209462
GI number: 126209462
Start: 2232346
End: 2233683
Strand: Direct
Name: srmB [H]
Synonym: APL_2008
Alternate gene names: 126209462
Gene position: 2232346-2233683 (Clockwise)
Preceding gene: 126209461
Following gene: 126209463
Centisome position: 98.15
GC content: 44.92
Gene sequence:
>1338_bases ATGACCACTGAAACCCCATTAATGACCTTTGAGGAATTGGATTTAGCCCCTCAACTGTTAAAAGCACTAAATAAAAAAGG CTACAAACGCCCGACTTCTGTACAAGCGGAAACCGTTCCGCACGCGCTTGACGGACGTGATTTACTTGGCTCGGCACCAA CCGGCACAGGTAAAACCGCCGCATTTTTATTGCCGGCGATTCAACATTTGTTAGATTACCCACGTCGTAAACCGGGCGCA CCACGCATTTTAATTTTAACCCCAACCCGTGAACTTGCGATGCAAGTGGCGGAAGAAGCGCAAGCTTTTGCCGAATTTAC CAAACTTAGTATTGCAACGATTACCGGCGGTGTAGCGTATCAAAACCACGGTGAAGTGTTTAACAGCAACCAAGATATCG TGGTCGCGACACCGGGACGTTTAATGCAATATATCAAAGAAGAAAACTTTGACTGCCGTGCGGTGGAGATTTTGATCTTT GATGAAGCGGATCGAATGCTACAAATGGGTTTCGGTCAAGATGCGGAAAAAATTGCGGCGGAAACCCGTTGGCGTAAACA TACCTGGTTATTCTCAGCAACGCTGGAAGGCGAGTTGTTAGTCGATTTTACTGATCGCATTTTGGATAACCCGTTAAAAA TTGATGCGGAACCAAGTCGCCGTGAGCGTAAAAAAATCCAACAATGGTATTATCATGCGGACAATGTGGAACACAAAACC AAATTGCTTGCCCGTTTAATTTCTACGATGGAAATGGAAAAAGCGATTGTGTTCGTTCGCCGCCGTGAAGATGTACGCGA GTTAAGTGATACGTTACGTAAACGTGGCTTACGTTCAACTTATTTAGAAGGCGATATGGCGCAAACTCAGCGTAACCAAG CGATTGCTCGTTTAAAAGACGGCGTGGTAAATGTGTTGGTGGCGACGGATGTTGCCGCACGTGGTATTGATATTGATGAT GTTGATTATGTGATTAACTTCGATTTACCGTACAGTGCGGATACCTATTTGCACCGTATCGGTCGTACCGCACGTGCCGG TAAAAAAGGCTCGGCAATCTCATTGGTGGAAGCACACGATTACAAACTCTTAGGTAAAATCAAGCGTTATACCGAGGAGT TATTAAAACCGAGAGTGATCGAAGGTTTAGAACCTCGTACCAAAGCGCCGAAAGACGGTGAGTTGAACACTACGACCAAA AAAGAAAAAGCACGCATTAAAAAACGTAAAGAAGCGAAAAAAGAAGCGGCAAAAGCCAAAGTAAAAGTGCGTCATAAAGA CACTAAGAATGTTGGTAAACGTCGTAAACCGGCTTCTGAAGCAGCAAAGTCTGCGTAA
Upstream 100 bases:
>100_bases GTCACTATTCGTAAAAATTATTATCCGACACCGAGCGGCGAAAGAGAAAATGCCATTGTTATGGCACTGTATTTATAAGT AATTAGGAACATTAAACATA
Downstream 100 bases:
>100_bases TACAAGCGGTTGAATTTTTGCAAAATTTTGCGGAAATTCGACCGCTTTTGTTTTCTAGTTTGTAGAGGAAAAACATGGAT CTACACAACATCCGAGAAGA
Product: ATP-dependent RNA helicase SrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTTETPLMTFEELDLAPQLLKALNKKGYKRPTSVQAETVPHALDGRDLLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGA PRILILTPTRELAMQVAEEAQAFAEFTKLSIATITGGVAYQNHGEVFNSNQDIVVATPGRLMQYIKEENFDCRAVEILIF DEADRMLQMGFGQDAEKIAAETRWRKHTWLFSATLEGELLVDFTDRILDNPLKIDAEPSRRERKKIQQWYYHADNVEHKT KLLARLISTMEMEKAIVFVRRREDVRELSDTLRKRGLRSTYLEGDMAQTQRNQAIARLKDGVVNVLVATDVAARGIDIDD VDYVINFDLPYSADTYLHRIGRTARAGKKGSAISLVEAHDYKLLGKIKRYTEELLKPRVIEGLEPRTKAPKDGELNTTTK KEKARIKKRKEAKKEAAKAKVKVRHKDTKNVGKRRKPASEAAKSA
Sequences:
>Translated_445_residues MTTETPLMTFEELDLAPQLLKALNKKGYKRPTSVQAETVPHALDGRDLLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGA PRILILTPTRELAMQVAEEAQAFAEFTKLSIATITGGVAYQNHGEVFNSNQDIVVATPGRLMQYIKEENFDCRAVEILIF DEADRMLQMGFGQDAEKIAAETRWRKHTWLFSATLEGELLVDFTDRILDNPLKIDAEPSRRERKKIQQWYYHADNVEHKT KLLARLISTMEMEKAIVFVRRREDVRELSDTLRKRGLRSTYLEGDMAQTQRNQAIARLKDGVVNVLVATDVAARGIDIDD VDYVINFDLPYSADTYLHRIGRTARAGKKGSAISLVEAHDYKLLGKIKRYTEELLKPRVIEGLEPRTKAPKDGELNTTTK KEKARIKKRKEAKKEAAKAKVKVRHKDTKNVGKRRKPASEAAKSA >Mature_444_residues TTETPLMTFEELDLAPQLLKALNKKGYKRPTSVQAETVPHALDGRDLLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAP RILILTPTRELAMQVAEEAQAFAEFTKLSIATITGGVAYQNHGEVFNSNQDIVVATPGRLMQYIKEENFDCRAVEILIFD EADRMLQMGFGQDAEKIAAETRWRKHTWLFSATLEGELLVDFTDRILDNPLKIDAEPSRRERKKIQQWYYHADNVEHKTK LLARLISTMEMEKAIVFVRRREDVRELSDTLRKRGLRSTYLEGDMAQTQRNQAIARLKDGVVNVLVATDVAARGIDIDDV DYVINFDLPYSADTYLHRIGRTARAGKKGSAISLVEAHDYKLLGKIKRYTEELLKPRVIEGLEPRTKAPKDGELNTTTKK EKARIKKRKEAKKEAAKAKVKVRHKDTKNVGKRRKPASEAAKSA
Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=381, Percent_Identity=35.9580052493438, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI20149629, Length=361, Percent_Identity=35.4570637119114, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI45446747, Length=369, Percent_Identity=36.0433604336043, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI45446743, Length=369, Percent_Identity=36.0433604336043, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI164419743, Length=351, Percent_Identity=36.7521367521368, Blast_Score=218, Evalue=6e-57, Organism=Homo sapiens, GI51094101, Length=351, Percent_Identity=36.7521367521368, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI262118318, Length=360, Percent_Identity=35.5555555555556, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI31542656, Length=447, Percent_Identity=34.675615212528, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI262231852, Length=360, Percent_Identity=36.1111111111111, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI41327771, Length=396, Percent_Identity=32.5757575757576, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI216548263, Length=360, Percent_Identity=35.5555555555556, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI13518015, Length=360, Percent_Identity=36.1111111111111, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI4758138, Length=392, Percent_Identity=34.4387755102041, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI148613856, Length=387, Percent_Identity=32.5581395348837, Blast_Score=211, Evalue=8e-55, Organism=Homo sapiens, GI38201710, Length=387, Percent_Identity=32.5581395348837, Blast_Score=211, Evalue=8e-55, Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=31.4917127071823, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=32.9639889196676, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI41327773, Length=370, Percent_Identity=32.972972972973, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI188035877, Length=382, Percent_Identity=33.2460732984293, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI222352149, Length=380, Percent_Identity=33.1578947368421, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI21071032, Length=374, Percent_Identity=32.0855614973262, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI21040371, Length=366, Percent_Identity=31.1475409836066, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=31.9783197831978, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=31.4207650273224, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=31.4207650273224, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=34.3243243243243, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=34.3243243243243, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI55749865, Length=354, Percent_Identity=31.3559322033898, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI301171467, Length=370, Percent_Identity=34.0540540540541, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI8922886, Length=374, Percent_Identity=32.3529411764706, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI6005743, Length=374, Percent_Identity=32.620320855615, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI87196351, Length=370, Percent_Identity=34.0540540540541, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI301171475, Length=370, Percent_Identity=34.0540540540541, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI38569503, Length=445, Percent_Identity=31.9101123595506, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI38569505, Length=383, Percent_Identity=32.6370757180157, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI50659095, Length=373, Percent_Identity=32.4396782841823, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI13514831, Length=374, Percent_Identity=32.8877005347594, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI4503529, Length=364, Percent_Identity=29.9450549450549, Blast_Score=175, Evalue=9e-44, Organism=Homo sapiens, GI83700235, Length=363, Percent_Identity=30.0275482093664, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI62241022, Length=356, Percent_Identity=31.7415730337079, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI9506931, Length=406, Percent_Identity=30.5418719211823, Blast_Score=171, Evalue=9e-43, Organism=Homo sapiens, GI13129006, Length=392, Percent_Identity=31.1224489795918, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI41327779, Length=371, Percent_Identity=33.6927223719677, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=30.4945054945055, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI62241024, Length=335, Percent_Identity=31.9402985074627, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI256223453, Length=356, Percent_Identity=30.6179775280899, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38327634, Length=359, Percent_Identity=31.1977715877437, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI17505907, Length=400, Percent_Identity=30, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI154759257, Length=422, Percent_Identity=28.1990521327014, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI9966805, Length=331, Percent_Identity=32.02416918429, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=30.2670623145401, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI256773275, Length=399, Percent_Identity=29.0726817042606, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=34.4186046511628, Blast_Score=107, Evalue=2e-23, Organism=Escherichia coli, GI1788930, Length=433, Percent_Identity=64.8960739030023, Blast_Score=545, Evalue=1e-156, Organism=Escherichia coli, GI87082221, Length=372, Percent_Identity=41.6666666666667, Blast_Score=279, Evalue=3e-76, Organism=Escherichia coli, GI1787016, Length=384, Percent_Identity=39.3229166666667, Blast_Score=275, Evalue=3e-75, Organism=Escherichia coli, GI1790214, Length=358, Percent_Identity=37.9888268156425, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1787605, Length=352, Percent_Identity=38.0681818181818, Blast_Score=214, Evalue=8e-57, Organism=Caenorhabditis elegans, GI17552642, Length=379, Percent_Identity=36.4116094986807, Blast_Score=244, Evalue=8e-65, Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=36.7403314917127, Blast_Score=237, Evalue=8e-63, Organism=Caenorhabditis elegans, GI86570094, Length=373, Percent_Identity=37.8016085790885, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17510559, Length=412, Percent_Identity=32.7669902912621, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=35.8126721763085, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=35.8126721763085, Blast_Score=221, Evalue=4e-58, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=35.8126721763085, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17507121, Length=362, Percent_Identity=33.7016574585635, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71995724, Length=362, Percent_Identity=33.4254143646409, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=34.6704871060172, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=34.6704871060172, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=35.7746478873239, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI32565321, Length=385, Percent_Identity=32.7272727272727, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI71987143, Length=362, Percent_Identity=30.939226519337, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17509811, Length=373, Percent_Identity=31.3672922252011, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17507877, Length=384, Percent_Identity=33.8541666666667, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI71995718, Length=399, Percent_Identity=32.8320802005013, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17537549, Length=372, Percent_Identity=32.258064516129, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17507881, Length=394, Percent_Identity=32.994923857868, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17507879, Length=383, Percent_Identity=33.420365535248, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=31.8681318681319, Blast_Score=188, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17552114, Length=390, Percent_Identity=30.7692307692308, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI115532548, Length=429, Percent_Identity=31.9347319347319, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17556951, Length=360, Percent_Identity=34.7222222222222, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI71982858, Length=366, Percent_Identity=30.8743169398907, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=32.1899736147757, Blast_Score=184, Evalue=9e-47, Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=30.9711286089239, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=30.9711286089239, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=31.6883116883117, Blast_Score=168, Evalue=4e-42, Organism=Caenorhabditis elegans, GI193206561, Length=382, Percent_Identity=30.8900523560209, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=31.5492957746479, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=28.6472148541114, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI193208216, Length=404, Percent_Identity=30.1980198019802, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17507641, Length=390, Percent_Identity=30.7692307692308, Blast_Score=161, Evalue=7e-40, Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=30.7692307692308, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI25148203, Length=430, Percent_Identity=26.046511627907, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI71990816, Length=387, Percent_Identity=30.2325581395349, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=24.5810055865922, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148291, Length=437, Percent_Identity=26.0869565217391, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71982862, Length=195, Percent_Identity=31.7948717948718, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71997889, Length=380, Percent_Identity=26.0526315789474, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=44.9438202247191, Blast_Score=86, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=37.0786516853933, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6321856, Length=364, Percent_Identity=35.989010989011, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6324217, Length=369, Percent_Identity=33.8753387533875, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6321360, Length=369, Percent_Identity=34.6883468834688, Blast_Score=214, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6325138, Length=378, Percent_Identity=33.8624338624339, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320224, Length=378, Percent_Identity=31.2169312169312, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6320041, Length=364, Percent_Identity=34.6153846153846, Blast_Score=202, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6320119, Length=386, Percent_Identity=33.419689119171, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6324778, Length=378, Percent_Identity=33.8624338624339, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6323947, Length=356, Percent_Identity=36.5168539325843, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=394, Percent_Identity=31.9796954314721, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=30.7086614173228, Blast_Score=189, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6322912, Length=361, Percent_Identity=31.0249307479224, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6322323, Length=361, Percent_Identity=31.0249307479224, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=32.9639889196676, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=32.5333333333333, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=30.8612440191388, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=365, Percent_Identity=30.4109589041096, Blast_Score=163, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=370, Percent_Identity=31.8918918918919, Blast_Score=162, Evalue=9e-41, Organism=Saccharomyces cerevisiae, GI6320173, Length=235, Percent_Identity=36.1702127659575, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=27.6029055690073, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=427, Percent_Identity=30.6791569086651, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=27.7486910994764, Blast_Score=145, Evalue=9e-36, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=26.4367816091954, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6322876, Length=183, Percent_Identity=26.775956284153, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=37.1352785145889, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24662330, Length=369, Percent_Identity=36.3143631436314, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24584399, Length=355, Percent_Identity=36.056338028169, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI28574962, Length=384, Percent_Identity=34.6354166666667, Blast_Score=231, Evalue=7e-61, Organism=Drosophila melanogaster, GI24585582, Length=362, Percent_Identity=34.5303867403315, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI21355075, Length=398, Percent_Identity=33.4170854271357, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=34.3406593406593, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI281361218, Length=364, Percent_Identity=34.3406593406593, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644481, Length=364, Percent_Identity=34.3406593406593, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=34.3406593406593, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=34.3406593406593, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=34.3406593406593, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=34.3406593406593, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI18857967, Length=374, Percent_Identity=33.6898395721925, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI28575014, Length=355, Percent_Identity=34.3661971830986, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI24642151, Length=368, Percent_Identity=33.4239130434783, Blast_Score=214, Evalue=8e-56, Organism=Drosophila melanogaster, GI24645031, Length=362, Percent_Identity=32.3204419889503, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI24584994, Length=395, Percent_Identity=32.4050632911392, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI17977678, Length=365, Percent_Identity=32.8767123287671, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24583281, Length=371, Percent_Identity=31.5363881401617, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24583279, Length=371, Percent_Identity=31.5363881401617, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=33.8666666666667, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24581954, Length=364, Percent_Identity=31.3186813186813, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24581952, Length=364, Percent_Identity=31.3186813186813, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24581956, Length=364, Percent_Identity=31.3186813186813, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=34.4936708860759, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17136814, Length=387, Percent_Identity=32.0413436692506, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=29.8342541436464, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=29.8342541436464, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=29.8342541436464, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=29.8342541436464, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24666101, Length=421, Percent_Identity=30.4038004750594, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI28571808, Length=356, Percent_Identity=30.3370786516854, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI28571809, Length=356, Percent_Identity=30.3370786516854, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI24642822, Length=372, Percent_Identity=31.4516129032258, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI20130173, Length=455, Percent_Identity=28.1318681318681, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=28.6516853932584, Blast_Score=158, Evalue=9e-39, Organism=Drosophila melanogaster, GI24643725, Length=399, Percent_Identity=28.8220551378446, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=29.6703296703297, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=27.9904306220096, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24640164, Length=384, Percent_Identity=26.8229166666667, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI19920478, Length=357, Percent_Identity=28.5714285714286, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=27.5757575757576, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI18859659, Length=202, Percent_Identity=34.1584158415842, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI28571338, Length=202, Percent_Identity=34.1584158415842, Blast_Score=95, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50272; Mature: 50141
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTETPLMTFEELDLAPQLLKALNKKGYKRPTSVQAETVPHALDGRDLLGSAPTGTGKTA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCCCCHH AFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEEAQAFAEFTKLSIATITGGVAY HHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEE QNHGEVFNSNQDIVVATPGRLMQYIKEENFDCRAVEILIFDEADRMLQMGFGQDAEKIAA CCCCCEECCCCCEEEECCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHCCCCCHHHHHH ETRWRKHTWLFSATLEGELLVDFTDRILDNPLKIDAEPSRRERKKIQQWYYHADNVEHKT HHHHHHEEEEEEEECCCCEEEEEHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHH KLLARLISTMEMEKAIVFVRRREDVRELSDTLRKRGLRSTYLEGDMAQTQRNQAIARLKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHH GVVNVLVATDVAARGIDIDDVDYVINFDLPYSADTYLHRIGRTARAGKKGSAISLVEAHD HHHEEHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHH YKLLGKIKRYTEELLKPRVIEGLEPRTKAPKDGELNTTTKKEKARIKKRKEAKKEAAKAK HHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VKVRHKDTKNVGKRRKPASEAAKSA EEEECCCHHHHHHCCCCHHHHHCCC >Mature Secondary Structure TTETPLMTFEELDLAPQLLKALNKKGYKRPTSVQAETVPHALDGRDLLGSAPTGTGKTA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCCCCHH AFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEEAQAFAEFTKLSIATITGGVAY HHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEE QNHGEVFNSNQDIVVATPGRLMQYIKEENFDCRAVEILIFDEADRMLQMGFGQDAEKIAA CCCCCEECCCCCEEEECCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHCCCCCHHHHHH ETRWRKHTWLFSATLEGELLVDFTDRILDNPLKIDAEPSRRERKKIQQWYYHADNVEHKT HHHHHHEEEEEEEECCCCEEEEEHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHH KLLARLISTMEMEKAIVFVRRREDVRELSDTLRKRGLRSTYLEGDMAQTQRNQAIARLKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHH GVVNVLVATDVAARGIDIDDVDYVINFDLPYSADTYLHRIGRTARAGKKGSAISLVEAHD HHHEEHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHH YKLLGKIKRYTEELLKPRVIEGLEPRTKAPKDGELNTTTKKEKARIKKRKEAKKEAAKAK HHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VKVRHKDTKNVGKRRKPASEAAKSA EEEECCCHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]