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The map label for this gene is yedE [H]

Identifier: 126209431

GI number: 126209431

Start: 2203946

End: 2205166

Strand: Reverse

Name: yedE [H]

Synonym: APL_1977

Alternate gene names: 126209431

Gene position: 2205166-2203946 (Counterclockwise)

Preceding gene: 126209434

Following gene: 126209430

Centisome position: 96.95

GC content: 44.8

Gene sequence:

>1221_bases
ATGTTAGAAATTTGGCAACAATTCAAACAGACCTATCTTATTAAATTTTGGAATCCCGTTCCTGCCGTTATCGCAGCCGG
TATTCTTTCCGCTTATTATTTCGGCCTAACCGGTACTTATTGGGCGGTAACCGGTGAATTTACCCGTTGGGGCGGCGAAA
TTTTACAATTATTAGGCGTTGATGTTTCAGGCTGGGGATATTTCAATTTCATCAGCTTAGACGGAACGATTTTAAACCGT
ATCGACGGTTTAATGATTCTCGGCATGTTCGCCGGCTGTATCGCCGCCGCACTTTGGGCGAATAATATGAAAATTCGGAT
GCCGCAAAATAAAATCCGTATTCTTCAAGCGTTAATCGGCGGAGCGTTAGCCGGCTTCGGCGCACGTCTGGCGATGGGTT
GTAATCTCGCCTCTCTGTTTACCGGTATTCCGCAATTTTCTATGCACGCTTGGTATTTCACGCTTGCTACCGCAATCGGG
ACTTACGCCGGGGTAAAATTCACTTTGCTGCCGATGTTCCGCCCGCCGCTTAAATTGAAAAAGGGTGCAGGAAAAGTGGA
AGCAAGTAATCCGAAGCAGGCACAATTTCGCTTTTGGATTGGTGTTGCCGTCTTTACTGCTTGGACAATCGCTTCAATCT
ATGTCTTGCAATATTCGATTAAATTGGGTTTTGCGATGTTATTCGGACTCGGCTTCGGTTTATTGATCGAACGAGCGCAA
ATTTGCTTTACTTCCGCCTTCCGTGATCTCTGGGTTTCAGGTCGTTCGCATATGGGCAAAGCGATTATTTACGGGATGTT
AATCGGTACGATTTGCGTATTCAGTTACATTCAATTAGGCATGGAACCTAAAATTATGTGGGCGGGGCCGAATGCGATTA
TCGGCGGTTTATTATTCGGCTTCGGTATCGTATTAGCCGGCGGTTGTGAAACCGGGTGGATGTATCGTGCAATGGAAGGA
CAAGTACATTTTATGTGGGTGGGCGTCGGTAATGTTATCGGTTCTACCTTACTTGCTTACCTTTGGGATGATCTCGCTCC
GGTACTTGCTTTAGATTATGAAAAAATTAACCTATTAAAATCATTCGGTCCGGTTAGCGGCTTATTGATTAACTATGCCT
TAATGATTGCCTGCCTTATCTTTATCGTATGGTGGGAAAAACGCTTTATTCGCAAAGCGAAAGTAAGAGTGGCGGCGACC
AATACTTATACCATTAACTAA

Upstream 100 bases:

>100_bases
GTGTATAGGAAATGAACGAATCTAATTGTTTTCAATTCTATTTCTTCATCATTATACCTTTGCTTGTCATTTTTAACTTC
TCTTAAGGATTTAAGGACTT

Downstream 100 bases:

>100_bases
CCAGAAGGAAACAAACCATGGCTTTTATCGTTATTGAACAAAAAGACAAACATCCAAGTGAAATCACACCTGACTACACT
TTAGATATGCTTGGAGAACC

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MLEIWQQFKQTYLIKFWNPVPAVIAAGILSAYYFGLTGTYWAVTGEFTRWGGEILQLLGVDVSGWGYFNFISLDGTILNR
IDGLMILGMFAGCIAAALWANNMKIRMPQNKIRILQALIGGALAGFGARLAMGCNLASLFTGIPQFSMHAWYFTLATAIG
TYAGVKFTLLPMFRPPLKLKKGAGKVEASNPKQAQFRFWIGVAVFTAWTIASIYVLQYSIKLGFAMLFGLGFGLLIERAQ
ICFTSAFRDLWVSGRSHMGKAIIYGMLIGTICVFSYIQLGMEPKIMWAGPNAIIGGLLFGFGIVLAGGCETGWMYRAMEG
QVHFMWVGVGNVIGSTLLAYLWDDLAPVLALDYEKINLLKSFGPVSGLLINYALMIACLIFIVWWEKRFIRKAKVRVAAT
NTYTIN

Sequences:

>Translated_406_residues
MLEIWQQFKQTYLIKFWNPVPAVIAAGILSAYYFGLTGTYWAVTGEFTRWGGEILQLLGVDVSGWGYFNFISLDGTILNR
IDGLMILGMFAGCIAAALWANNMKIRMPQNKIRILQALIGGALAGFGARLAMGCNLASLFTGIPQFSMHAWYFTLATAIG
TYAGVKFTLLPMFRPPLKLKKGAGKVEASNPKQAQFRFWIGVAVFTAWTIASIYVLQYSIKLGFAMLFGLGFGLLIERAQ
ICFTSAFRDLWVSGRSHMGKAIIYGMLIGTICVFSYIQLGMEPKIMWAGPNAIIGGLLFGFGIVLAGGCETGWMYRAMEG
QVHFMWVGVGNVIGSTLLAYLWDDLAPVLALDYEKINLLKSFGPVSGLLINYALMIACLIFIVWWEKRFIRKAKVRVAAT
NTYTIN
>Mature_406_residues
MLEIWQQFKQTYLIKFWNPVPAVIAAGILSAYYFGLTGTYWAVTGEFTRWGGEILQLLGVDVSGWGYFNFISLDGTILNR
IDGLMILGMFAGCIAAALWANNMKIRMPQNKIRILQALIGGALAGFGARLAMGCNLASLFTGIPQFSMHAWYFTLATAIG
TYAGVKFTLLPMFRPPLKLKKGAGKVEASNPKQAQFRFWIGVAVFTAWTIASIYVLQYSIKLGFAMLFGLGFGLLIERAQ
ICFTSAFRDLWVSGRSHMGKAIIYGMLIGTICVFSYIQLGMEPKIMWAGPNAIIGGLLFGFGIVLAGGCETGWMYRAMEG
QVHFMWVGVGNVIGSTLLAYLWDDLAPVLALDYEKINLLKSFGPVSGLLINYALMIACLIFIVWWEKRFIRKAKVRVAAT
NTYTIN

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=395, Percent_Identity=67.5949367088608, Blast_Score=536, Evalue=1e-154,
Organism=Escherichia coli, GI1788323, Length=174, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 44917; Mature: 44917

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIWQQFKQTYLIKFWNPVPAVIAAGILSAYYFGLTGTYWAVTGEFTRWGGEILQLLGV
CCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCC
DVSGWGYFNFISLDGTILNRIDGLMILGMFAGCIAAALWANNMKIRMPQNKIRILQALIG
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
GALAGFGARLAMGCNLASLFTGIPQFSMHAWYFTLATAIGTYAGVKFTLLPMFRPPLKLK
HHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHC
KGAGKVEASNPKQAQFRFWIGVAVFTAWTIASIYVLQYSIKLGFAMLFGLGFGLLIERAQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICFTSAFRDLWVSGRSHMGKAIIYGMLIGTICVFSYIQLGMEPKIMWAGPNAIIGGLLFG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
FGIVLAGGCETGWMYRAMEGQVHFMWVGVGNVIGSTLLAYLWDDLAPVLALDYEKINLLK
HHHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
SFGPVSGLLINYALMIACLIFIVWWEKRFIRKAKVRVAATNTYTIN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEC
>Mature Secondary Structure
MLEIWQQFKQTYLIKFWNPVPAVIAAGILSAYYFGLTGTYWAVTGEFTRWGGEILQLLGV
CCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCC
DVSGWGYFNFISLDGTILNRIDGLMILGMFAGCIAAALWANNMKIRMPQNKIRILQALIG
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
GALAGFGARLAMGCNLASLFTGIPQFSMHAWYFTLATAIGTYAGVKFTLLPMFRPPLKLK
HHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHC
KGAGKVEASNPKQAQFRFWIGVAVFTAWTIASIYVLQYSIKLGFAMLFGLGFGLLIERAQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICFTSAFRDLWVSGRSHMGKAIIYGMLIGTICVFSYIQLGMEPKIMWAGPNAIIGGLLFG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
FGIVLAGGCETGWMYRAMEGQVHFMWVGVGNVIGSTLLAYLWDDLAPVLALDYEKINLLK
HHHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
SFGPVSGLLINYALMIACLIFIVWWEKRFIRKAKVRVAATNTYTIN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]