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The map label for this gene is yedF [H]

Identifier: 126209430

GI number: 126209430

Start: 2203659

End: 2203928

Strand: Reverse

Name: yedF [H]

Synonym: APL_1976

Alternate gene names: 126209430

Gene position: 2203928-2203659 (Counterclockwise)

Preceding gene: 126209431

Following gene: 126209423

Centisome position: 96.9

GC content: 37.41

Gene sequence:

>270_bases
ATGGCTTTTATCGTTATTGAACAAAAAGACAAACATCCAAGTGAAATCACACCTGACTACACTTTAGATATGCTTGGAGA
ACCTTGCCCGTATCCGGCAATTGCCACTTTAGAAACGTTACCGACTTTACAAGAAGGTGAGATCTTAGAAGTACTAAGTG
ATTGTGCGCAATCTATCAATAATATTCCGGTTGATATGAAAAATCACGGCTATACGTTATTAAGCGTAGAACAAGACGGT
GCGACTTTACGCTATTTGATTAAAAAATAG

Upstream 100 bases:

>100_bases
TCTTTATCGTATGGTGGGAAAAACGCTTTATTCGCAAAGCGAAAGTAAGAGTGGCGGCGACCAATACTTATACCATTAAC
TAACCAGAAGGAAACAAACC

Downstream 100 bases:

>100_bases
CTATAACGCATAAAAAAGACCGCTTATAAGCGGTCTTTTTTAGCTAAAGTTTTACCGATTAATCAATCGGCGGCACGTAG
GTACCGCTTACAATCGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MAFIVIEQKDKHPSEITPDYTLDMLGEPCPYPAIATLETLPTLQEGEILEVLSDCAQSINNIPVDMKNHGYTLLSVEQDG
ATLRYLIKK

Sequences:

>Translated_89_residues
MAFIVIEQKDKHPSEITPDYTLDMLGEPCPYPAIATLETLPTLQEGEILEVLSDCAQSINNIPVDMKNHGYTLLSVEQDG
ATLRYLIKK
>Mature_88_residues
AFIVIEQKDKHPSEITPDYTLDMLGEPCPYPAIATLETLPTLQEGEILEVLSDCAQSINNIPVDMKNHGYTLLSVEQDGA
TLRYLIKK

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family [H]

Homologues:

Organism=Escherichia coli, GI1788239, Length=76, Percent_Identity=69.7368421052632, Blast_Score=123, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001455 [H]

Pfam domain/function: PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 9934; Mature: 9802

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFIVIEQKDKHPSEITPDYTLDMLGEPCPYPAIATLETLPTLQEGEILEVLSDCAQSIN
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHC
NIPVDMKNHGYTLLSVEQDGATLRYLIKK
CCCCEECCCCEEEEEEECCCCEEEEEECC
>Mature Secondary Structure 
AFIVIEQKDKHPSEITPDYTLDMLGEPCPYPAIATLETLPTLQEGEILEVLSDCAQSIN
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHC
NIPVDMKNHGYTLLSVEQDGATLRYLIKK
CCCCEECCCCEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]