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The map label for this gene is 126209417

Identifier: 126209417

GI number: 126209417

Start: 2193500

End: 2194060

Strand: Reverse

Name: 126209417

Synonym: APL_1963

Alternate gene names: NA

Gene position: 2194060-2193500 (Counterclockwise)

Preceding gene: 126209419

Following gene: 126209411

Centisome position: 96.46

GC content: 43.14

Gene sequence:

>561_bases
ATGAATATTACCGTTTATTGCGGCGCAAACGTAGGAAACAAACCGCAATATCAACAAGCCGCACACGCACTCGGCGAATG
GATTGCTAAAGGTCAGCATCAATTAATTTATGGCGGAGGAAAAGCCGGTTTGATGGGGATTGTTGCCGATAGTGTCTTAG
CTCAACACGGCAAAGTAACGGGGGTAATACCGACCTTTTTGCAAGAACGAGAACTTGCTCATCCTTCACTCACCGAGCTG
ATTACCGTTAAGAATATGCCGGAACGAAAACTAAAAATGATTGAATTAGGCGATGCCTATATTGCCTTACCCGGAGGCCC
CGGTACATTGGAAGAAATTACCGAAGTGGTTTCATGGGCAAGAATCGGACAGAATAATAATCCTTGTATCTTCTTTGATG
TGGCAGGTTATTACCGACCGTTGCAAGCGTTTTATCAACAAATGGTTGATAACGGTTTTCTTAGTCAAACCGATTTGGAT
TGCGTGCTATTCTCTGATGATTTCACTGAAATCGAACAATTTATTCAAAATTACAGACCGCCGGAAATCCGCCGCTATTA
A

Upstream 100 bases:

>100_bases
AACTCTCTGACCCAATTTTGATAATCTTGAATCTGCATTGTATTTCCCTGTTTGGCTTGTCATAATAGTTTCAGTTTAAT
CGGAAAAAATAGGAAAGCCA

Downstream 100 bases:

>100_bases
ATGCAAAAGGCGGTAGCAATGCTACCCGCTGTATGCTAGTTCTCTTCCCAACTTGCGAATTCAATATATTCCGTCAATTC
GGGGAATTGTTTTAGCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNITVYCGANVGNKPQYQQAAHALGEWIAKGQHQLIYGGGKAGLMGIVADSVLAQHGKVTGVIPTFLQERELAHPSLTEL
ITVKNMPERKLKMIELGDAYIALPGGPGTLEEITEVVSWARIGQNNNPCIFFDVAGYYRPLQAFYQQMVDNGFLSQTDLD
CVLFSDDFTEIEQFIQNYRPPEIRRY

Sequences:

>Translated_186_residues
MNITVYCGANVGNKPQYQQAAHALGEWIAKGQHQLIYGGGKAGLMGIVADSVLAQHGKVTGVIPTFLQERELAHPSLTEL
ITVKNMPERKLKMIELGDAYIALPGGPGTLEEITEVVSWARIGQNNNPCIFFDVAGYYRPLQAFYQQMVDNGFLSQTDLD
CVLFSDDFTEIEQFIQNYRPPEIRRY
>Mature_186_residues
MNITVYCGANVGNKPQYQQAAHALGEWIAKGQHQLIYGGGKAGLMGIVADSVLAQHGKVTGVIPTFLQERELAHPSLTEL
ITVKNMPERKLKMIELGDAYIALPGGPGTLEEITEVVSWARIGQNNNPCIFFDVAGYYRPLQAFYQQMVDNGFLSQTDLD
CVLFSDDFTEIEQFIQNYRPPEIRRY

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=209, Percent_Identity=32.5358851674641, Blast_Score=114, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20755; Mature: 20755

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITVYCGANVGNKPQYQQAAHALGEWIAKGQHQLIYGGGKAGLMGIVADSVLAQHGKVT
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCEE
GVIPTFLQERELAHPSLTELITVKNMPERKLKMIELGDAYIALPGGPGTLEEITEVVSWA
EHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHEEEEECCEEEEECCCCCCHHHHHHHHHHH
RIGQNNNPCIFFDVAGYYRPLQAFYQQMVDNGFLSQTDLDCVLFSDDFTEIEQFIQNYRP
HHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCCC
PEIRRY
CCCCCC
>Mature Secondary Structure
MNITVYCGANVGNKPQYQQAAHALGEWIAKGQHQLIYGGGKAGLMGIVADSVLAQHGKVT
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCEE
GVIPTFLQERELAHPSLTELITVKNMPERKLKMIELGDAYIALPGGPGTLEEITEVVSWA
EHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHEEEEECCEEEEECCCCCCHHHHHHHHHHH
RIGQNNNPCIFFDVAGYYRPLQAFYQQMVDNGFLSQTDLDCVLFSDDFTEIEQFIQNYRP
HHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCCC
PEIRRY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]