| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209374
Identifier: 126209374
GI number: 126209374
Start: 2149066
End: 2149293
Strand: Direct
Name: 126209374
Synonym: APL_1914
Alternate gene names: NA
Gene position: 2149066-2149293 (Clockwise)
Preceding gene: 126209373
Following gene: 126209378
Centisome position: 94.49
GC content: 41.23
Gene sequence:
>228_bases ATGGCATTACAACGTTGCCCAGAGTGTCGGCACAAAATTAGCGAGAGTGTTATCGCTTGTCCGCATTGCGGTTTTTCATT TAAAGAAGCGGACTTAGCCGTTTATCGTGAGAAATTGGAACAACGCCGCTTACATAATCAGGCATTGAATCGTCAGAATG TCAAAGTACAACTTTTCTGGCTGGGTGTATTTACATTAGTCATTGTAGTAGCTTCTTTGCTTAACTAA
Upstream 100 bases:
>100_bases AGGCGGAACGTATTCGCATTTGGTAATCGCAAGCGGTCGAGTTTTGACAAAATTTTGCAAAAAATCCGCCAAATTCGACC GCTTGTTTTAAGGAACTGTT
Downstream 100 bases:
>100_bases AAAGAAAGGCATAGGTTGGGAACCTATGCCTTTTTACGATTCGGTTGGTTAAAAACCGCTGTTACCGATTACGATTTTTT ACCGAAACGATTGCCGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MALQRCPECRHKISESVIACPHCGFSFKEADLAVYREKLEQRRLHNQALNRQNVKVQLFWLGVFTLVIVVASLLN
Sequences:
>Translated_75_residues MALQRCPECRHKISESVIACPHCGFSFKEADLAVYREKLEQRRLHNQALNRQNVKVQLFWLGVFTLVIVVASLLN >Mature_74_residues ALQRCPECRHKISESVIACPHCGFSFKEADLAVYREKLEQRRLHNQALNRQNVKVQLFWLGVFTLVIVVASLLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018886 [H]
Pfam domain/function: PF10571 UPF0547 [H]
EC number: NA
Molecular weight: Translated: 8667; Mature: 8536
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQRCPECRHKISESVIACPHCGFSFKEADLAVYREKLEQRRLHNQALNRQNVKVQLFW CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH LGVFTLVIVVASLLN HHHHHHHHHHHHHHC >Mature Secondary Structure ALQRCPECRHKISESVIACPHCGFSFKEADLAVYREKLEQRRLHNQALNRQNVKVQLFW CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH LGVFTLVIVVASLLN HHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]