| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209356
Identifier: 126209356
GI number: 126209356
Start: 2127357
End: 2128148
Strand: Reverse
Name: 126209356
Synonym: APL_1896
Alternate gene names: NA
Gene position: 2128148-2127357 (Counterclockwise)
Preceding gene: 126209357
Following gene: 126209355
Centisome position: 93.57
GC content: 44.44
Gene sequence:
>792_bases ATGATAGAAGTATTTTTGAGTTGTCTTGTCGTAGGTTCGGCGGTCGGCTTCTTAGCCGGTTTATTCGGTATCGGCGGCGG TTTGATCATCGTACCGAGTTTGGTTTATTTATTACCCTTAGCCGGTGTAACACCGGAGAATTTAATGGCGGCTGCACTCG GTACTTCGTTTTCAACCATTGTGGTAACCGCCTTTTCATCGGCGCAACGTCATCACAAATTAGGTAATGTGGATGTACTA GTCAGTAAATATTTCATTCCCGCTTTAATGGTATCGGTCTTCCTTGCAGGCTTAGCGGTAAGCAATTTGGATGCGAAATT GATGTCGAAGATTTTTGCGGTAATGGTGCTGTATTTAGCGGCGAGAATGTTGTTTTCCTTGAAAAAAACGCCTGAAATTA AACCGCTTACCACGCAATTTACTATTGTCGCCGGCGGCGTAATCGGTGCCTTATCCAGTATGGCGGGGATTGCCGGCGGT GCTTTTATCGTGCCGTTTCTAAATAGCCGAGGGTTAGAAATGAAACGTGCTATCGGCACTTCATCATTTTGTGGGGCGTT TTTAGGTTTATCCGGTACGATTAGTTTTATCGCAAGCGGTTGGAATGTAGAAACGATGCCGGACTACTCTTTAGGTTATG TCTATTTACCGGCGTTATTAGGTATAACCTTAACCTCTTATTTTACCTCTAAGCTTGGGGCGAATGCGGCGAATGTCTTA CCGGTCGCGACCTTGAAAAAAGCCTTTGCGGTGATGTTGGTTGCGATAGCGATTAATATGTTTGTAAAATAA
Upstream 100 bases:
>100_bases GTACGGAAAAGCGCGATTTTCAAAAACGTGATAATCAAAAACGCGAATTTCGCAAATCTGCTCGTATGTGGAACAATTCG CATCAGAAAGGAAAAGCGCA
Downstream 100 bases:
>100_bases TGCGACGTTTGCTCCCCTCTGTATCAGAGGGGAATTTTTTTAAAGGAATAATATGAACGAACAATTTATTCAATTTCCAC AAATTGACCCGATTATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAFSSAQRHHKLGNVDVL VSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGG AFIVPFLNSRGLEMKRAIGTSSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL PVATLKKAFAVMLVAIAINMFVK
Sequences:
>Translated_263_residues MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAFSSAQRHHKLGNVDVL VSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGG AFIVPFLNSRGLEMKRAIGTSSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL PVATLKKAFAVMLVAIAINMFVK >Mature_263_residues MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAFSSAQRHHKLGNVDVL VSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGG AFIVPFLNSRGLEMKRAIGTSSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL PVATLKKAFAVMLVAIAINMFVK
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 27391; Mature: 27391
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTI CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH VVTAFSSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGT HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCC SSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH PVATLKKAFAVMLVAIAINMFVK HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTI CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH VVTAFSSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGT HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCC SSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH PVATLKKAFAVMLVAIAINMFVK HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]