Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is ycbG [C]

Identifier: 126209351

GI number: 126209351

Start: 2123601

End: 2124047

Strand: Direct

Name: ycbG [C]

Synonym: APL_1891

Alternate gene names: 126209351

Gene position: 2123601-2124047 (Clockwise)

Preceding gene: 126209342

Following gene: 126209360

Centisome position: 93.37

GC content: 36.47

Gene sequence:

>447_bases
ATGCGATATCAAAAATTAGAGATTCAAGAAGCGAATTGGAAATGGAAATATCTGCTGAAAAAACATCGTGAAGGCGAGAA
TATTACCAAATATGAAGAAACCAGTTTAATTGAGTTAAAAGTTCAGCTTTTAACCACGCTTCAACATTCTCCGGAAGAAA
TCGAACAGTGGATTAAACAAGAAATGACCGCCGAACAACGTAAGAAAATGCGTCAGTCGGTACGAGCAAGACGTAAACGT
TATTTCAATGCGGAAAAAATTACCACCAAGAAAAAGTCGATCGATTTGGAATACGCCAGCTGGTTGCGCTTATCCAAATA
TGCCAAAGAAAAAGAAATGACGCTGTCGGAAGCGGTCAATTACTTAATGGACGAATTGGAAAATCAGCAAATCTATCAAG
AACAAATGGCAAAAATGAAATCCAGTCTGAAAGATTTATTAAAATAA

Upstream 100 bases:

>100_bases
ATGGGGTTAAATTCACGAAAATGCCTCATAATAGAAATTTGGTTTATTATACAGAATTCCGCTATACTGATAAGCGTTAA
TCTAGGGGAATCAAATAAAA

Downstream 100 bases:

>100_bases
GCGGTCATATTTCGCGAAAATCTACAAAAATGCCCTTGTATCTCACTTACAGGGGCATTTTCTTTTAAGAATTATTGTAC
GAAACCAACTAATTTATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRYQKLEIQEANWKWKYLLKKHREGENITKYEETSLIELKVQLLTTLQHSPEEIEQWIKQEMTAEQRKKMRQSVRARRKR
YFNAEKITTKKKSIDLEYASWLRLSKYAKEKEMTLSEAVNYLMDELENQQIYQEQMAKMKSSLKDLLK

Sequences:

>Translated_148_residues
MRYQKLEIQEANWKWKYLLKKHREGENITKYEETSLIELKVQLLTTLQHSPEEIEQWIKQEMTAEQRKKMRQSVRARRKR
YFNAEKITTKKKSIDLEYASWLRLSKYAKEKEMTLSEAVNYLMDELENQQIYQEQMAKMKSSLKDLLK
>Mature_148_residues
MRYQKLEIQEANWKWKYLLKKHREGENITKYEETSLIELKVQLLTTLQHSPEEIEQWIKQEMTAEQRKKMRQSVRARRKR
YFNAEKITTKKKSIDLEYASWLRLSKYAKEKEMTLSEAVNYLMDELENQQIYQEQMAKMKSSLKDLLK

Specific function: Unknown

COG id: COG3120

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0268 family [H]

Homologues:

Organism=Escherichia coli, GI1787190, Length=147, Percent_Identity=46.9387755102041, Blast_Score=137, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009390
- ProDom:   PD033720 [H]

Pfam domain/function: PF06303 DUF1047 [H]

EC number: NA

Molecular weight: Translated: 18111; Mature: 18111

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYQKLEIQEANWKWKYLLKKHREGENITKYEETSLIELKVQLLTTLQHSPEEIEQWIKQ
CCCCCCCHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EMTAEQRKKMRQSVRARRKRYFNAEKITTKKKSIDLEYASWLRLSKYAKEKEMTLSEAVN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
YLMDELENQQIYQEQMAKMKSSLKDLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRYQKLEIQEANWKWKYLLKKHREGENITKYEETSLIELKVQLLTTLQHSPEEIEQWIKQ
CCCCCCCHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EMTAEQRKKMRQSVRARRKRYFNAEKITTKKKSIDLEYASWLRLSKYAKEKEMTLSEAVN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
YLMDELENQQIYQEQMAKMKSSLKDLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA