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The map label for this gene is ompA [H]

Identifier: 126209314

GI number: 126209314

Start: 2083177

End: 2084271

Strand: Reverse

Name: ompA [H]

Synonym: APL_1852

Alternate gene names: 126209314

Gene position: 2084271-2083177 (Counterclockwise)

Preceding gene: 126209315

Following gene: 126209313

Centisome position: 91.64

GC content: 42.74

Gene sequence:

>1095_bases
ATGAAAAAATCATTAGTTGCTTTAACAGTATTATCGGCTGCAGCGGTAGCTCAAGCAGCGCCACAACAAAATACTTTCTA
CGCAGGTGCGAAAGCAGGTTGGGCGTCATTCCATGATGGTATCGAACAATTAGATTCAGCTAAAAACACAGATCGCGGTA
CAAAATACGGTATCAACCGTAATTCAGTAACTTACGGCGTATTCGGCGGTTACCAAATTTTAAACCAAGACAAATTAGGT
TTAGCGGCTGAATTAGGTTATGACTATTTCGGTCGTGTGCGCGGTTCTGAAAAACCAAACGGTAAAGCGGACAAGAAAAC
TTTCCGTCACGCTGCACACGGTGCGACAATCGCATTAAAACCTAGCTACGAAGTATTACCTGACTTAGACGTTTACGGTA
AAGTAGGTATCGCATTAGTAAACAATACATATAAAACATTCAATGCAGCACAAGAGAAAGTGAAAACTCGTCGTTTCCAA
AGTTCTTTAATTTTAGGTGCGGGTGTTGAGTACGCAATTCTTCCTGAATTAGCGGCACGTGTTGAATACCAATGGTTAAA
CAACGCAGGTAAAGCAAGCTACTCTACTTTAAATCGTATGGGTGCAACTGACTACCGTTCGGATATCAGTTCCGTATCTG
CAGGTTTAAGCTACCGTTTCGGTCAAGGTGCGGTACCGGTTGCAGCTCCGGCAGTTGAAACTAAAAACTTCGCATTCAGC
TCTGACGTATTATTCGCATTCGGTAAATCAAACTTAAAACCGGCTGCGGCAACAGCATTAGATGCAATGCAAACCGAAAT
CAATAACGCAGGTTTATCAAATGCTGCGATCCAAGTAAACGGTTACACGGACCGTATCGGTAAAGAAGCTTCAAACTTAA
AACTTTCACAACGTCGTGCGGAAACAGTAGCTAACTACATCGTTTCTAAAGGTGCTCTGGCAGCTAACGTAACTGCAGTA
GGTTACGGTGAAGCAAACCCTGTAACCGGCGCAACATGTGACAAAGTTAAAGGTCGTAAAGCATTAATCGCTTGCTTAGC
ACCGGATCGTCGTGTTGAAGTTCAAGTTCAAGGTACTAAAGAAGTAACTATGTAA

Upstream 100 bases:

>100_bases
TTTGAGATACACATAAAATAATTTACGGCTTTATTCATTATCCCTTTTAGGTTAGGGATTTGTCTTTAATAGATGACGAT
AAATTTAGAGGATCATCAAA

Downstream 100 bases:

>100_bases
TTTAGTTAATTTTCTAAAGTTAAATTAGTAACCCTCTTGCTTATTTAAGCAAGAGGGTTATTTTTTTGTTCCATTTTAAT
TAGTGCTACTCTTCCTGTGT

Product: Outer membrane protein P5 precursor (OMP P5)

Products: NA

Alternate protein names: OMP P5 [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKKSLVALTVLSAAAVAQAAPQQNTFYAGAKAGWASFHDGIEQLDSAKNTDRGTKYGINRNSVTYGVFGGYQILNQDKLG
LAAELGYDYFGRVRGSEKPNGKADKKTFRHAAHGATIALKPSYEVLPDLDVYGKVGIALVNNTYKTFNAAQEKVKTRRFQ
SSLILGAGVEYAILPELAARVEYQWLNNAGKASYSTLNRMGATDYRSDISSVSAGLSYRFGQGAVPVAAPAVETKNFAFS
SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGALAANVTAV
GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQVQGTKEVTM

Sequences:

>Translated_364_residues
MKKSLVALTVLSAAAVAQAAPQQNTFYAGAKAGWASFHDGIEQLDSAKNTDRGTKYGINRNSVTYGVFGGYQILNQDKLG
LAAELGYDYFGRVRGSEKPNGKADKKTFRHAAHGATIALKPSYEVLPDLDVYGKVGIALVNNTYKTFNAAQEKVKTRRFQ
SSLILGAGVEYAILPELAARVEYQWLNNAGKASYSTLNRMGATDYRSDISSVSAGLSYRFGQGAVPVAAPAVETKNFAFS
SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGALAANVTAV
GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQVQGTKEVTM
>Mature_364_residues
MKKSLVALTVLSAAAVAQAAPQQNTFYAGAKAGWASFHDGIEQLDSAKNTDRGTKYGINRNSVTYGVFGGYQILNQDKLG
LAAELGYDYFGRVRGSEKPNGKADKKTFRHAAHGATIALKPSYEVLPDLDVYGKVGIALVNNTYKTFNAAQEKVKTRRFQ
SSLILGAGVEYAILPELAARVEYQWLNNAGKASYSTLNRMGATDYRSDISSVSAGLSYRFGQGAVPVAAPAVETKNFAFS
SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGALAANVTAV
GYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQVQGTKEVTM

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=379, Percent_Identity=41.1609498680739, Blast_Score=251, Evalue=6e-68,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 38732; Mature: 38732

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLVALTVLSAAAVAQAAPQQNTFYAGAKAGWASFHDGIEQLDSAKNTDRGTKYGINR
CCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
NSVTYGVFGGYQILNQDKLGLAAELGYDYFGRVRGSEKPNGKADKKTFRHAAHGATIALK
CCEEEEECCCEEEECCCCCCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEC
PSYEVLPDLDVYGKVGIALVNNTYKTFNAAQEKVKTRRFQSSLILGAGVEYAILPELAAR
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHH
VEYQWLNNAGKASYSTLNRMGATDYRSDISSVSAGLSYRFGQGAVPVAAPAVETKNFAFS
HHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEEC
SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRIGKEASNLKLSQRRA
CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCHHCCHHHHHHH
ETVANYIVSKGALAANVTAVGYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQVQGTK
HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHCCCCEEEEEEECCCCEEEEEEECCC
EVTM
CCCC
>Mature Secondary Structure
MKKSLVALTVLSAAAVAQAAPQQNTFYAGAKAGWASFHDGIEQLDSAKNTDRGTKYGINR
CCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
NSVTYGVFGGYQILNQDKLGLAAELGYDYFGRVRGSEKPNGKADKKTFRHAAHGATIALK
CCEEEEECCCEEEECCCCCCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEC
PSYEVLPDLDVYGKVGIALVNNTYKTFNAAQEKVKTRRFQSSLILGAGVEYAILPELAAR
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHH
VEYQWLNNAGKASYSTLNRMGATDYRSDISSVSAGLSYRFGQGAVPVAAPAVETKNFAFS
HHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEEC
SDVLFAFGKSNLKPAAATALDAMQTEINNAGLSNAAIQVNGYTDRIGKEASNLKLSQRRA
CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCHHCCHHHHHHH
ETVANYIVSKGALAANVTAVGYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQVQGTK
HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHCCCCEEEEEEECCCCEEEEEEECCC
EVTM
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]