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The map label for this gene is tfoX [H]

Identifier: 126209222

GI number: 126209222

Start: 1995709

End: 1996365

Strand: Reverse

Name: tfoX [H]

Synonym: APL_1758

Alternate gene names: 126209222

Gene position: 1996365-1995709 (Counterclockwise)

Preceding gene: 126209254

Following gene: 126209221

Centisome position: 87.77

GC content: 32.57

Gene sequence:

>657_bases
ATGGCAATATCCCCAAAAAAGTTCCAATATCTTAAGGAGATTTTTAGTCCTCTTGGAGAAATTAACTTCAAAAGCTATTT
TTCTTACTTAGGAATATTTAAAGACGATACTATGTTCGCCCTCTATGATCATAAAAACGATCGATTATACTTAAGAAAAT
CCGCTCAATTTTATCCGGATATTATAAGAACAATACCGATACATTTTTTAATTGATCGTCGTATCGGTAAGCAACAATCT
CATATTTTTTATCTTATACCTTCTTCTATTATTCACAATCTTCATTTATATACTCATTGGATTCTCTCTGCTATCGAAGA
ATATCAAACTGCAAAGGCCAAATTGATTTCTCAAAATAAAAATAAAATTCGTCTGCTTCCCAATTTGAATATCAATATAG
AAAGATTATTGGCACGTATTGAGATTTATACCGTAGATGATTTAAAAAACGTAGGCGTGATTAATGCGTTTGTAAAACTG
ATAATGCTAGGCTTGGAAGTAACCGAATTACTCCTCTTCAAACTCTACGCTGCGCTCGAACATAAATATATCTATATGTT
ATCCAAGCAAGAAAAACAATCCCTATTAATTGAAGCCGATTTATCTCTCTATAACGCAGGCCTACGTAAACGCTTCGCTA
TCTCACAGGCTAACTAA

Upstream 100 bases:

>100_bases
TTATTATATTTACATTATTGACATTAAATAATTTATTTTGCAAAATATACATAAATTTCGCTCATTAAAAAATAATCATA
TATAAAAAAGGAGAAACATA

Downstream 100 bases:

>100_bases
TTTACTTTATTTATGATCCATGTCACAAAATCAATAAAAAACCGGGAGGGAATACTGTAAGCCGGTTCCTTTCTGATTAT
CTCAATGCTACCATCCTACC

Product: DNA transformation protein

Products: NA

Alternate protein names: Competence activator; Protein sxy [H]

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAISPKKFQYLKEIFSPLGEINFKSYFSYLGIFKDDTMFALYDHKNDRLYLRKSAQFYPDIIRTIPIHFLIDRRIGKQQS
HIFYLIPSSIIHNLHLYTHWILSAIEEYQTAKAKLISQNKNKIRLLPNLNINIERLLARIEIYTVDDLKNVGVINAFVKL
IMLGLEVTELLLFKLYAALEHKYIYMLSKQEKQSLLIEADLSLYNAGLRKRFAISQAN

Sequences:

>Translated_218_residues
MAISPKKFQYLKEIFSPLGEINFKSYFSYLGIFKDDTMFALYDHKNDRLYLRKSAQFYPDIIRTIPIHFLIDRRIGKQQS
HIFYLIPSSIIHNLHLYTHWILSAIEEYQTAKAKLISQNKNKIRLLPNLNINIERLLARIEIYTVDDLKNVGVINAFVKL
IMLGLEVTELLLFKLYAALEHKYIYMLSKQEKQSLLIEADLSLYNAGLRKRFAISQAN
>Mature_217_residues
AISPKKFQYLKEIFSPLGEINFKSYFSYLGIFKDDTMFALYDHKNDRLYLRKSAQFYPDIIRTIPIHFLIDRRIGKQQSH
IFYLIPSSIIHNLHLYTHWILSAIEEYQTAKAKLISQNKNKIRLLPNLNINIERLLARIEIYTVDDLKNVGVINAFVKLI
MLGLEVTELLLFKLYAALEHKYIYMLSKQEKQSLLIEADLSLYNAGLRKRFAISQAN

Specific function: Required for DNA transformation. Positively regulates gene required for DNA transformation (late competence-specific genes) [H]

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli sxy [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 25634; Mature: 25502

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISPKKFQYLKEIFSPLGEINFKSYFSYLGIFKDDTMFALYDHKNDRLYLRKSAQFYPD
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCEECCCCEEEEEECCCCEEEEECCCCHHHH
IIRTIPIHFLIDRRIGKQQSHIFYLIPSSIIHNLHLYTHWILSAIEEYQTAKAKLISQNK
HHHHHHHHHEEEHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NKIRLLPNLNINIERLLARIEIYTVDDLKNVGVINAFVKLIMLGLEVTELLLFKLYAALE
CEEEEECCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKYIYMLSKQEKQSLLIEADLSLYNAGLRKRFAISQAN
HHEEEEECCCCHHHEEEEHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AISPKKFQYLKEIFSPLGEINFKSYFSYLGIFKDDTMFALYDHKNDRLYLRKSAQFYPD
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCEECCCCEEEEEECCCCEEEEECCCCHHHH
IIRTIPIHFLIDRRIGKQQSHIFYLIPSSIIHNLHLYTHWILSAIEEYQTAKAKLISQNK
HHHHHHHHHEEEHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NKIRLLPNLNINIERLLARIEIYTVDDLKNVGVINAFVKLIMLGLEVTELLLFKLYAALE
CEEEEECCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKYIYMLSKQEKQSLLIEADLSLYNAGLRKRFAISQAN
HHEEEEECCCCHHHEEEEHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7724607; 7542800; 7961436 [H]