Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

Click here to switch to the map view.

The map label for this gene is sfsA

Identifier: 126209201

GI number: 126209201

Start: 1972961

End: 1973674

Strand: Reverse

Name: sfsA

Synonym: APL_1737

Alternate gene names: 126209201

Gene position: 1973674-1972961 (Counterclockwise)

Preceding gene: 126209202

Following gene: 126209200

Centisome position: 86.77

GC content: 44.96

Gene sequence:

>714_bases
ATGCAATTTCCTTCTCTTTCTTGCGGCATATTAATCAAACGTTATAAACGTTTTTTAGCCGATATTCTGCTGCCCAACGG
CGAGCAAATTACCCTACATTGTCCGAACACCGGTGCAATGACCGGCTGTGCTACTACCGGCGATACCGTTTGGTTTTCCA
CATCAGATAATCCTAAACGCAAATATGCTCACACTTGGGAACTGACTCAAACTCAAGCGGGTGATTTTATTTGTGTGAAT
ACCCAACGAGCCAACCAGCTGGTGCAAGAAGCATTAGAAAAGCGCTGGATTGCCGAACTCGCCGAGTACCAAACCGTCTT
GCCCGAACAAAAATACGGCTCGGAAAACAGCCGCATTGATTTTCTGCTCAAAGCGGACAATCAGCCCGACTGTTTTGCAG
AAGTGAAATCCACTACCTTACTTACTGAAAACGATTTGGGGATGTTCCCCGATGCCAAAACGGAACGCGGGCAAAAACAC
TTGCGAGAACTGGCTGCGATTGCCGAATCCGGGCAACAAGCGGTCATACTTTTTGCGATTTTACACACTGGCATCCAACG
TTTTGCCGTGGCAAAACAAATTGATCCGCAATATGCTGCCTTATTTGAACAAGCGAAAAATGTTGGGGTAAAAGTATTAG
CGTATAAAGCCCAAATAGAATTAGTACTCGGCAAGCCAATATCAATGAATTTGCAATTTTCCTGTGAAATCTGA

Upstream 100 bases:

>100_bases
CCGCCAGTCAAGTAATAACAACTTGACCAACCGTTAATCAGTTTGACACAAAAACCGCTTTGCAAAAAGCGGTTTTTTTC
TTTATAAATCAAAGACTATT

Downstream 100 bases:

>100_bases
CCGCTTATCCTTGAAAAAGGCAAATTTTCCCCCATTTAACACCCCAGTTTTCCCTAAAATAAAGGACAAGGATTTAATAT
GACAACAATCGTATGTGTTC

Product: sugar fermentation stimulation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKRKYAHTWELTQTQAGDFICVN
TQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRIDFLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKH
LRELAAIAESGQQAVILFAILHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI

Sequences:

>Translated_237_residues
MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKRKYAHTWELTQTQAGDFICVN
TQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRIDFLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKH
LRELAAIAESGQQAVILFAILHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI
>Mature_237_residues
MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKRKYAHTWELTQTQAGDFICVN
TQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRIDFLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKH
LRELAAIAESGQQAVILFAILHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family

Homologues:

Organism=Escherichia coli, GI1786340, Length=235, Percent_Identity=59.5744680851064, Blast_Score=295, Evalue=2e-81,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): SFSA_ACTP2 (A3N335)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001054426.1
- STRING:   A3N335
- GeneID:   4848991
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_1737
- eggNOG:   COG1489
- HOGENOM:   HBG655520
- OMA:   NTGSMLN
- PhylomeDB:   A3N335
- ProtClustDB:   PRK00347
- BioCyc:   APLE416269:APL_1737-MONOMER
- HAMAP:   MF_00095
- InterPro:   IPR005224
- TIGRFAMs:   TIGR00230

Pfam domain/function: PF03749 SfsA

EC number: NA

Molecular weight: Translated: 26516; Mature: 26516

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKR
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCH
KYAHTWELTQTQAGDFICVNTQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRID
HCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEE
FLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKHLRELAAIAESGQQAVILFAI
EEEECCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCEEEEEEEEECC
>Mature Secondary Structure
MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKR
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCH
KYAHTWELTQTQAGDFICVNTQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRID
HCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEE
FLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKHLRELAAIAESGQQAVILFAI
EEEECCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA