| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is sfsA
Identifier: 126209201
GI number: 126209201
Start: 1972961
End: 1973674
Strand: Reverse
Name: sfsA
Synonym: APL_1737
Alternate gene names: 126209201
Gene position: 1973674-1972961 (Counterclockwise)
Preceding gene: 126209202
Following gene: 126209200
Centisome position: 86.77
GC content: 44.96
Gene sequence:
>714_bases ATGCAATTTCCTTCTCTTTCTTGCGGCATATTAATCAAACGTTATAAACGTTTTTTAGCCGATATTCTGCTGCCCAACGG CGAGCAAATTACCCTACATTGTCCGAACACCGGTGCAATGACCGGCTGTGCTACTACCGGCGATACCGTTTGGTTTTCCA CATCAGATAATCCTAAACGCAAATATGCTCACACTTGGGAACTGACTCAAACTCAAGCGGGTGATTTTATTTGTGTGAAT ACCCAACGAGCCAACCAGCTGGTGCAAGAAGCATTAGAAAAGCGCTGGATTGCCGAACTCGCCGAGTACCAAACCGTCTT GCCCGAACAAAAATACGGCTCGGAAAACAGCCGCATTGATTTTCTGCTCAAAGCGGACAATCAGCCCGACTGTTTTGCAG AAGTGAAATCCACTACCTTACTTACTGAAAACGATTTGGGGATGTTCCCCGATGCCAAAACGGAACGCGGGCAAAAACAC TTGCGAGAACTGGCTGCGATTGCCGAATCCGGGCAACAAGCGGTCATACTTTTTGCGATTTTACACACTGGCATCCAACG TTTTGCCGTGGCAAAACAAATTGATCCGCAATATGCTGCCTTATTTGAACAAGCGAAAAATGTTGGGGTAAAAGTATTAG CGTATAAAGCCCAAATAGAATTAGTACTCGGCAAGCCAATATCAATGAATTTGCAATTTTCCTGTGAAATCTGA
Upstream 100 bases:
>100_bases CCGCCAGTCAAGTAATAACAACTTGACCAACCGTTAATCAGTTTGACACAAAAACCGCTTTGCAAAAAGCGGTTTTTTTC TTTATAAATCAAAGACTATT
Downstream 100 bases:
>100_bases CCGCTTATCCTTGAAAAAGGCAAATTTTCCCCCATTTAACACCCCAGTTTTCCCTAAAATAAAGGACAAGGATTTAATAT GACAACAATCGTATGTGTTC
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKRKYAHTWELTQTQAGDFICVN TQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRIDFLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKH LRELAAIAESGQQAVILFAILHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI
Sequences:
>Translated_237_residues MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKRKYAHTWELTQTQAGDFICVN TQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRIDFLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKH LRELAAIAESGQQAVILFAILHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI >Mature_237_residues MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKRKYAHTWELTQTQAGDFICVN TQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRIDFLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKH LRELAAIAESGQQAVILFAILHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=235, Percent_Identity=59.5744680851064, Blast_Score=295, Evalue=2e-81,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_ACTP2 (A3N335)
Other databases:
- EMBL: CP000569 - RefSeq: YP_001054426.1 - STRING: A3N335 - GeneID: 4848991 - GenomeReviews: CP000569_GR - KEGG: apl:APL_1737 - eggNOG: COG1489 - HOGENOM: HBG655520 - OMA: NTGSMLN - PhylomeDB: A3N335 - ProtClustDB: PRK00347 - BioCyc: APLE416269:APL_1737-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 26516; Mature: 26516
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKR CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCH KYAHTWELTQTQAGDFICVNTQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRID HCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEE FLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKHLRELAAIAESGQQAVILFAI EEEECCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH LHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI HHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCEEEEEEEEECC >Mature Secondary Structure MQFPSLSCGILIKRYKRFLADILLPNGEQITLHCPNTGAMTGCATTGDTVWFSTSDNPKR CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCH KYAHTWELTQTQAGDFICVNTQRANQLVQEALEKRWIAELAEYQTVLPEQKYGSENSRID HCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEE FLLKADNQPDCFAEVKSTTLLTENDLGMFPDAKTERGQKHLRELAAIAESGQQAVILFAI EEEECCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH LHTGIQRFAVAKQIDPQYAALFEQAKNVGVKVLAYKAQIELVLGKPISMNLQFSCEI HHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA