Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is 126209196

Identifier: 126209196

GI number: 126209196

Start: 1968640

End: 1969056

Strand: Reverse

Name: 126209196

Synonym: APL_1732

Alternate gene names: NA

Gene position: 1969056-1968640 (Counterclockwise)

Preceding gene: 126209198

Following gene: 126209179

Centisome position: 86.57

GC content: 38.13

Gene sequence:

>417_bases
ATGCAAAACTTGCTAACTAAATTTAAAACATCGGAAGTAGATATTCTGATCCTGCGTTTATCAATTTTTATCGTCTTTGC
CACATTCGGGATTTTTAAATGGTTTGATTTCGAGGTAGAGGCTCTTAAACCGTTAATTTCTACTACTTGGCTTAATTTTC
TCTACGATTGGTTCGGCTTTCACGGCGCAAGTTACCTACTGGGGGTAATTGAAGGTATCACTTATATCGGTTTATTTGTC
GGTATTTTCTATCCGAAAGCCGGCATTATCGGTGCATTAGGATTAATCGGCACCGCTTTAGTGACCCTTAGCCTACTGCC
GCAAATCGGATTTAACAGCTTTATCTTTAAGGATTTCTTACTTATCGGAGGGGCGATTGTACTGTTAAAACATGATTTAA
ATAGATCGTTTCCATAA

Upstream 100 bases:

>100_bases
GCTTGTTTGCTGCTAAAAATGCCCTTTCTCTATTTCCTTGTAAGAGCTTACCTATTGTTACGTCCCTTATAAGTATCATA
ATTATTTATAAGGAGACATT

Downstream 100 bases:

>100_bases
CATATCCATAAAGCAATCAGCGGTTAAATTCCTCGCATTTTTTGCAAAATTATAAGGGAATTTAACCGCTTGTTTGTTAT
CTGGAAATATTTAAAAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MQNLLTKFKTSEVDILILRLSIFIVFATFGIFKWFDFEVEALKPLISTTWLNFLYDWFGFHGASYLLGVIEGITYIGLFV
GIFYPKAGIIGALGLIGTALVTLSLLPQIGFNSFIFKDFLLIGGAIVLLKHDLNRSFP

Sequences:

>Translated_138_residues
MQNLLTKFKTSEVDILILRLSIFIVFATFGIFKWFDFEVEALKPLISTTWLNFLYDWFGFHGASYLLGVIEGITYIGLFV
GIFYPKAGIIGALGLIGTALVTLSLLPQIGFNSFIFKDFLLIGGAIVLLKHDLNRSFP
>Mature_138_residues
MQNLLTKFKTSEVDILILRLSIFIVFATFGIFKWFDFEVEALKPLISTTWLNFLYDWFGFHGASYLLGVIEGITYIGLFV
GIFYPKAGIIGALGLIGTALVTLSLLPQIGFNSFIFKDFLLIGGAIVLLKHDLNRSFP

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15475; Mature: 15475

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLLTKFKTSEVDILILRLSIFIVFATFGIFKWFDFEVEALKPLISTTWLNFLYDWFGF
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGASYLLGVIEGITYIGLFVGIFYPKAGIIGALGLIGTALVTLSLLPQIGFNSFIFKDFL
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LIGGAIVLLKHDLNRSFP
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQNLLTKFKTSEVDILILRLSIFIVFATFGIFKWFDFEVEALKPLISTTWLNFLYDWFGF
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGASYLLGVIEGITYIGLFVGIFYPKAGIIGALGLIGTALVTLSLLPQIGFNSFIFKDFL
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LIGGAIVLLKHDLNRSFP
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA