Click here to switch to the map view.

The map label for this gene is sorA [H]

Identifier: 126209125

GI number: 126209125

Start: 1887340

End: 1888134

Strand: Reverse

Name: sorA [H]

Synonym: APL_1661

Alternate gene names: 126209125

Gene position: 1888134-1887340 (Counterclockwise)

Preceding gene: 126209126

Following gene: 126209124

Centisome position: 83.01

GC content: 45.53

Gene sequence:

>795_bases
ATGACTAGTATTGAAATTATTTTAGTAACCTTAGTCGCTGCAATCTGCGGTATGGGTTCCGTACTTGATGAACGCCAAAC
TCACCGCCCGCTTGTGGCTTGTACCTTAATCGGCTGGGTGTTAGGCGACTTACAAACAGGTATTATTGTTGGCGGTACGC
TTGAAATGTTGGCGTTAGGCTGGATGAACGTTGGTGCGGCAATGGCGCCGGATGCAGCATTAGCGTCTGTGATTGCAGCA
ATCTTAGTAATCAAAGGCGGACAAGATAAAGGTACGGCAATCGCTATCGCCATTCCGGTGGCTGCGGCAGGTCAGGTATT
AACCATCTTCGTGCGTACCCTAACCATCTTTTTACAACATAAAGCGGATAAATTTGCCGAACAAGCAAACTTCCGTGGTA
TTGAGTTCTGTCATTTTGCCGGTCTTTCTTTACAAGCGTTACGTGTTGCGATTCCAACTTTCTTCGTGGCGCTTGTAGCA
GGCACCGATACAGTAACCGAAGCATTAAATGCAATTCCGGAAGTGGTAACTCGCGGTTTACAAATCGCCGGTGGCTTTAT
CGTGGTGGTAGGTTATGCGATGGTTATCAATATGATGCGTGCCGGTGCGTTAATGCCGTTCTTCTTTATGGGCTTTGTAA
TTGCATCATTCTCAAACTACAACTTAGTCGGTCTTGGTTTCTTAGGTGCGTGTTTAGCAATGCTTTACATCCAATTAAAC
CCACAATTCAACCAATCGGTAAGTGCGCCTCGTACTACGAAAAAATTAGCGGATAACGAGTTAGAAGGTCTATAA

Upstream 100 bases:

>100_bases
TAGGCGTAGATATGTCGTTACAACAAGTGGCGGCAAACAAAAAAGAACCGCTTGATAAAGCACGTCTTGATGCAATCAAA
TTCTAATTAAGGATTTTATT

Downstream 100 bases:

>100_bases
GGAGCAAATTATGTCAGAGAAAAAACAACTTACCAGTGCGGATATTCGTGCGACTTATTGGCGTTCAACTTTCCTATTAG
GATCATTTAACTTTGAACGT

Product: mannose permease IIC component

Products: protein histidine; sugar phosphate; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]

Alternate protein names: EIIC-Sor; PTS system sorbose-specific EIIC component [H]

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTSIEIILVTLVAAICGMGSVLDERQTHRPLVACTLIGWVLGDLQTGIIVGGTLEMLALGWMNVGAAMAPDAALASVIAA
ILVIKGGQDKGTAIAIAIPVAAAGQVLTIFVRTLTIFLQHKADKFAEQANFRGIEFCHFAGLSLQALRVAIPTFFVALVA
GTDTVTEALNAIPEVVTRGLQIAGGFIVVVGYAMVINMMRAGALMPFFFMGFVIASFSNYNLVGLGFLGACLAMLYIQLN
PQFNQSVSAPRTTKKLADNELEGL

Sequences:

>Translated_264_residues
MTSIEIILVTLVAAICGMGSVLDERQTHRPLVACTLIGWVLGDLQTGIIVGGTLEMLALGWMNVGAAMAPDAALASVIAA
ILVIKGGQDKGTAIAIAIPVAAAGQVLTIFVRTLTIFLQHKADKFAEQANFRGIEFCHFAGLSLQALRVAIPTFFVALVA
GTDTVTEALNAIPEVVTRGLQIAGGFIVVVGYAMVINMMRAGALMPFFFMGFVIASFSNYNLVGLGFLGACLAMLYIQLN
PQFNQSVSAPRTTKKLADNELEGL
>Mature_263_residues
TSIEIILVTLVAAICGMGSVLDERQTHRPLVACTLIGWVLGDLQTGIIVGGTLEMLALGWMNVGAAMAPDAALASVIAAI
LVIKGGQDKGTAIAIAIPVAAAGQVLTIFVRTLTIFLQHKADKFAEQANFRGIEFCHFAGLSLQALRVAIPTFFVALVAG
TDTVTEALNAIPEVVTRGLQIAGGFIVVVGYAMVINMMRAGALMPFFFMGFVIASFSNYNLVGLGFLGACLAMLYIQLNP
QFNQSVSAPRTTKKLADNELEGL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1788121, Length=264, Percent_Identity=63.2575757575758, Blast_Score=297, Evalue=5e-82,
Organism=Escherichia coli, GI1789528, Length=251, Percent_Identity=25.0996015936255, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 27819; Mature: 27688

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIEIILVTLVAAICGMGSVLDERQTHRPLVACTLIGWVLGDLQTGIIVGGTLEMLALG
CCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHH
WMNVGAAMAPDAALASVIAAILVIKGGQDKGTAIAIAIPVAAAGQVLTIFVRTLTIFLQH
HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
KADKFAEQANFRGIEFCHFAGLSLQALRVAIPTFFVALVAGTDTVTEALNAIPEVVTRGL
HHHHHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QIAGGFIVVVGYAMVINMMRAGALMPFFFMGFVIASFSNYNLVGLGFLGACLAMLYIQLN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCC
PQFNQSVSAPRTTKKLADNELEGL
CCCCCCCCCCHHHHHHHCHHCCCC
>Mature Secondary Structure 
TSIEIILVTLVAAICGMGSVLDERQTHRPLVACTLIGWVLGDLQTGIIVGGTLEMLALG
CCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHH
WMNVGAAMAPDAALASVIAAILVIKGGQDKGTAIAIAIPVAAAGQVLTIFVRTLTIFLQH
HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
KADKFAEQANFRGIEFCHFAGLSLQALRVAIPTFFVALVAGTDTVTEALNAIPEVVTRGL
HHHHHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QIAGGFIVVVGYAMVINMMRAGALMPFFFMGFVIASFSNYNLVGLGFLGACLAMLYIQLN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCC
PQFNQSVSAPRTTKKLADNELEGL
CCCCCCCCCCHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N p -phosphohistidine; sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]

Specific reaction: protein N p -phosphohistidine + sugar = protein histidine + sugar phosphate phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]

General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]