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The map label for this gene is ychJ [C]

Identifier: 126209122

GI number: 126209122

Start: 1885558

End: 1886034

Strand: Reverse

Name: ychJ [C]

Synonym: APL_1658

Alternate gene names: 126209122

Gene position: 1886034-1885558 (Counterclockwise)

Preceding gene: 126209123

Following gene: 126209121

Centisome position: 82.92

GC content: 44.03

Gene sequence:

>477_bases
ATGTCAGACAATTTAACCGCTTGCCCGTGCCAATCCGGTAAGCCTTATACGGAATGCTGTCAGCCGTTTCATTTAAAAAC
AGCATTCCCGGAAACCGCCGAACAATTAATGCGTTCTCGCTATGCGGCTTATACTTTGGTTAATATCGATTATATTGTGG
AGACAACTGTCCCTAGCCAGCAGAAATTTTTAGATCAGGCGGCAATGAAAACATGGGGCGAAACTACCAAGTGGGCGGGG
TTAGAAGTCATCGCACATCAGCCGTATATCTCTAAGATTCACAGTTTGGTTGAATTTAAAGCCCTATTTAACACGGAAAA
CGGCATCGAAGCGCATCACGAATTATCGTTGTTCGTACAGATAGATAACCGTTGGTATTTCGTTGATCCGACCGTACCAC
TCCCTTCGCAAAAACAAAATTGCGTATGCGGTTCCGGTAAAAAATTCAAACATTGCTGTGGCGCCTATTTAGCCTAA

Upstream 100 bases:

>100_bases
AAATGTTAAATGATAACAAGGTGCTTTCCGAGCAGGCAAAAAATGAAATTAACGCCTTACTCAAATTTGTGAGTGATTCA
ACCAAGTCAGAGTCGTAACA

Downstream 100 bases:

>100_bases
TCCTCAAATACAAGCGGTTAATTTTGCAAAGAATTTTGAAAAAATAACCGCTTATCCTATTCCCATAAAAAAACTCCCAT
TTCTTACAATATTTCGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSDNLTACPCQSGKPYTECCQPFHLKTAFPETAEQLMRSRYAAYTLVNIDYIVETTVPSQQKFLDQAAMKTWGETTKWAG
LEVIAHQPYISKIHSLVEFKALFNTENGIEAHHELSLFVQIDNRWYFVDPTVPLPSQKQNCVCGSGKKFKHCCGAYLA

Sequences:

>Translated_158_residues
MSDNLTACPCQSGKPYTECCQPFHLKTAFPETAEQLMRSRYAAYTLVNIDYIVETTVPSQQKFLDQAAMKTWGETTKWAG
LEVIAHQPYISKIHSLVEFKALFNTENGIEAHHELSLFVQIDNRWYFVDPTVPLPSQKQNCVCGSGKKFKHCCGAYLA
>Mature_157_residues
SDNLTACPCQSGKPYTECCQPFHLKTAFPETAEQLMRSRYAAYTLVNIDYIVETTVPSQQKFLDQAAMKTWGETTKWAGL
EVIAHQPYISKIHSLVEFKALFNTENGIEAHHELSLFVQIDNRWYFVDPTVPLPSQKQNCVCGSGKKFKHCCGAYLA

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=147, Percent_Identity=36.0544217687075, Blast_Score=97, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 17886; Mature: 17754

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNLTACPCQSGKPYTECCQPFHLKTAFPETAEQLMRSRYAAYTLVNIDYIVETTVPSQ
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEECCCCHH
QKFLDQAAMKTWGETTKWAGLEVIAHQPYISKIHSLVEFKALFNTENGIEAHHELSLFVQ
HHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
IDNRWYFVDPTVPLPSQKQNCVCGSGKKFKHCCGAYLA
ECCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SDNLTACPCQSGKPYTECCQPFHLKTAFPETAEQLMRSRYAAYTLVNIDYIVETTVPSQ
CCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEECCCCHH
QKFLDQAAMKTWGETTKWAGLEVIAHQPYISKIHSLVEFKALFNTENGIEAHHELSLFVQ
HHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
IDNRWYFVDPTVPLPSQKQNCVCGSGKKFKHCCGAYLA
ECCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA