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The map label for this gene is yidA [C]

Identifier: 126209120

GI number: 126209120

Start: 1883701

End: 1884513

Strand: Direct

Name: yidA [C]

Synonym: APL_1656

Alternate gene names: 126209120

Gene position: 1883701-1884513 (Clockwise)

Preceding gene: 126209108

Following gene: 126209130

Centisome position: 82.82

GC content: 38.25

Gene sequence:

>813_bases
ATGAATAATTCGGAGATGATTATGAAAAAACCACTCTATTTGGCTGTTTTTAGTGATATTGACGGAACGTTGCTTAATAC
GGCACATCAAATTACGCCCTTGACGCGGCAAGCTATTCAATCCGTTATGCAAAAGGGTATTCCTTTTATACCCGTTTCCG
CTCGCCCTCCTTTAGCTATCACGCCTTATACTCAACAATTGCAAAGTTACTATCCGATCATCTGTTATAGCGGTGCATTA
ATATTAGATCAGGATCTAAGTCAGTTATATAGTGTAGTGATAGAACAAGCGGATCTTAATCGGTTGGATCTATTGCTTGA
AAAATATCAACACCTTTCTATTAACCATTATGCGGGTATTGATTGGCTTACTAATGATTTGGAAAACGAGTGGACTGTTC
AAGAAAGTGAAATTACCGGTTTACAAGCGGTCGAAAAAACGAAAAATTTAACAGATGTACATAAAATTCTGGTCATGGGG
GAAGCGGAGCAAATTCAATCTTTAGAAAAGTTATTGAAACAGCAGTTACCGCATCTTGCCATTCATCGTTCTAAAAATGA
ATATTTGGAGATAATGAATAAGCAAGCGACCAAATCGAATGCCATTCGTTTTATGGAAACAATCTTGAATGTGAATCAAG
ATCAGGTCATTGCTTTCGGCGATAATTTTAACGATTTGGATATGTTGCAATATGCGGGGCTTAGCGTGGCAATGGGCAAT
GCGCCGGAAGAGATTAAAGCGGCGGCAAAACGGGTTACCTTATCCAATAACGATGACGGGATTGCAGTCGTATTAAATGA
AATATTTAACTAA

Upstream 100 bases:

>100_bases
AAGTTGTCAGGCGATAATCTACTGAATTATCCACAGATAAAATAATTAATTTTATGCTGATTTAATAAACAAAACGGCGT
AATATAAAGCGTATTTAAGA

Downstream 100 bases:

>100_bases
ATGATAAAAAATAATGCCTCGCTGATAACGAGGCATTTTATTTATTTCATTATTTCACGCTAATATCACGACCGAAGAAT
TGTTCGCCTAATTTTTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MNNSEMIMKKPLYLAVFSDIDGTLLNTAHQITPLTRQAIQSVMQKGIPFIPVSARPPLAITPYTQQLQSYYPIICYSGAL
ILDQDLSQLYSVVIEQADLNRLDLLLEKYQHLSINHYAGIDWLTNDLENEWTVQESEITGLQAVEKTKNLTDVHKILVMG
EAEQIQSLEKLLKQQLPHLAIHRSKNEYLEIMNKQATKSNAIRFMETILNVNQDQVIAFGDNFNDLDMLQYAGLSVAMGN
APEEIKAAAKRVTLSNNDDGIAVVLNEIFN

Sequences:

>Translated_270_residues
MNNSEMIMKKPLYLAVFSDIDGTLLNTAHQITPLTRQAIQSVMQKGIPFIPVSARPPLAITPYTQQLQSYYPIICYSGAL
ILDQDLSQLYSVVIEQADLNRLDLLLEKYQHLSINHYAGIDWLTNDLENEWTVQESEITGLQAVEKTKNLTDVHKILVMG
EAEQIQSLEKLLKQQLPHLAIHRSKNEYLEIMNKQATKSNAIRFMETILNVNQDQVIAFGDNFNDLDMLQYAGLSVAMGN
APEEIKAAAKRVTLSNNDDGIAVVLNEIFN
>Mature_270_residues
MNNSEMIMKKPLYLAVFSDIDGTLLNTAHQITPLTRQAIQSVMQKGIPFIPVSARPPLAITPYTQQLQSYYPIICYSGAL
ILDQDLSQLYSVVIEQADLNRLDLLLEKYQHLSINHYAGIDWLTNDLENEWTVQESEITGLQAVEKTKNLTDVHKILVMG
EAEQIQSLEKLLKQQLPHLAIHRSKNEYLEIMNKQATKSNAIRFMETILNVNQDQVIAFGDNFNDLDMLQYAGLSVAMGN
APEEIKAAAKRVTLSNNDDGIAVVLNEIFN

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=262, Percent_Identity=27.8625954198473, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786982, Length=262, Percent_Identity=27.0992366412214, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI48994981, Length=272, Percent_Identity=22.7941176470588, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI87081790, Length=139, Percent_Identity=29.4964028776978, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30444; Mature: 30444

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSEMIMKKPLYLAVFSDIDGTLLNTAHQITPLTRQAIQSVMQKGIPFIPVSARPPLAI
CCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEE
TPYTQQLQSYYPIICYSGALILDQDLSQLYSVVIEQADLNRLDLLLEKYQHLSINHYAGI
CCHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
DWLTNDLENEWTVQESEITGLQAVEKTKNLTDVHKILVMGEAEQIQSLEKLLKQQLPHLA
HHHHHCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH
IHRSKNEYLEIMNKQATKSNAIRFMETILNVNQDQVIAFGDNFNDLDMLQYAGLSVAMGN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCEEEECC
APEEIKAAAKRVTLSNNDDGIAVVLNEIFN
CHHHHHHHHHHEEECCCCCCCEEHHHHHCC
>Mature Secondary Structure
MNNSEMIMKKPLYLAVFSDIDGTLLNTAHQITPLTRQAIQSVMQKGIPFIPVSARPPLAI
CCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEE
TPYTQQLQSYYPIICYSGALILDQDLSQLYSVVIEQADLNRLDLLLEKYQHLSINHYAGI
CCHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
DWLTNDLENEWTVQESEITGLQAVEKTKNLTDVHKILVMGEAEQIQSLEKLLKQQLPHLA
HHHHHCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH
IHRSKNEYLEIMNKQATKSNAIRFMETILNVNQDQVIAFGDNFNDLDMLQYAGLSVAMGN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCEEEECC
APEEIKAAAKRVTLSNNDDGIAVVLNEIFN
CHHHHHHHHHHEEECCCCCCCEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]