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The map label for this gene is yfbS [H]

Identifier: 126209091

GI number: 126209091

Start: 1849607

End: 1851472

Strand: Reverse

Name: yfbS [H]

Synonym: APL_1627

Alternate gene names: 126209091

Gene position: 1851472-1849607 (Counterclockwise)

Preceding gene: 126209092

Following gene: 126209090

Centisome position: 81.4

GC content: 44.37

Gene sequence:

>1866_bases
ATGCAGACTCTTCTTAATTATTTACCTTCTTTTTTACAACATCCGCTATTTTGGGTGTTGGCGATTCTTATCGTTGCCGT
TGTGCTATTTATCCAAAACAAATTACGTATGGATATTATCGCATTGCTGGTAATGCTTGCCTTTAGCGTCAGCGGCATTT
TAACGACGCAAGAAATCTTTGCGGGCTTAAGCGATCCGAACATTGTTTTATTAGCTCTGTTATATGTGGTGGGCGAAGCG
CTTGCCCGTACCGGTGTGGCGTATCAAATCAGCGATTGGCTAATGCGGGCGGCGGGTTCAAGCGAAACCAAAGTATTGGT
GTTGATGATGCTGTCGATCGGATTGTTGGGCGCATTTATGAGTTCGACCGGAATTGTGGCGATTTTTATACCGGTTGCGT
TGGCGATTTGTGCCGAAATGAATATTTCGCCTCGCCGTATGATGATGCCGCTCAGTATTGCCGGTTTAATCAGCGGTATG
ATGACCTTAATTGCGACCGCACCAAACCTTGTGACGCATTCGGAACTGATTAAAGCCGACTATCAAGGATTCGGCTTTTT
TAGTTTTACCCCGATAGGTATGACGGTACTTGTGCTCGGTATTTTATATATGTTGGTCGCTCGCCGTTGGTTGGATAACG
GCGATATACCGACGCTCGCCAAAGACGATAACAGTATGTCGCACTTAATTGAGCAATATCAGCTGCACGGACGAGCCAAA
ATGGTGATCTTGCAAGAAGGTTCGCCGTTTATCGGTAAAACCATGGATGAGCTGAAACTGCGCTCGCTGTATCGCATGAA
TGTGATTGCCATCCAACGCTATAAAAATTTCCGCTCGCAAATTATGGCGGCGTTCGGTAACGACCAATTGCAAGAAAAAG
ATATTTTGTTGATGGATATCGGCATTGACGAAGATATTTTTGCGATGTTATGCGAAGAATGTCACTTACAACCGGTAGAG
TTGAAAGGCGAATATTTCTCAACACATTCCAAATCGGTCGGCATGGCGGAATTTGTCGTGATGCCGGAAACGGAAAGTAT
CGATAAAAAGGTACAGGAATTGAATTTCCGCCCGACTTACGGTTTAAGCGTAGTTGGGATTAAACGAGAAAACCGGATTT
TACAAGATAATTTGTTAAAAGAACCGGTTAAAGCGGGCGATGTGCTGTTGGTAATGGGCGTATGGCAAAAAATCGTTGCG
TTGGAAAAATATAATAAAGACTTATTTCTGCTCGGTATGCCGAAAGAGGGCAAACAGATTGCGCCGTCCACCAGTCAAGC
GCCTTACGCACTGTTTTCGGTATTATTGATGGTCGTTTTAATGATCTCGGGTATCGTGCCGAATGTGATCGCCGCATTGA
TTTGCTGTTTATTGCTCGGTAAATTTCGCTGTATTGATATGAAAAGCGCTTATGATTCGATTCATTTTCCAACGCTTTTA
TTAATTGTCGGTATGATGCCGTTTTCGACCGCGATGCAAAAAACCGGCGGTGTGGCGTTGATGGTAGAGGAATTTATTCG
ATTTACCGGCGGTTCCGAAACCTCTTATATTTTTATTTTAATCGGATTATTTGCTTTGACTGCGATAGTCGGCTTATTTA
TCTCGAATACGGCGACGGCGATTCTAATGGCTCCGATTGCAATTGAAGTGGCAAGACAGTTGGGCTATTCGCCGATTGCG
TTGGTGATGGTGATTACTATCGCTTCTTCCGCCGCATTTATGACACCGATTTCATCTCCGGTGAATACGATGGTGATTGC
GCCGGCGGGCTATCGCTTTATGGATTTCGTCAAAGTCGGCGTACCGTTTACGATTTTAGTGATGTTTGCCACGGTCTTGA
TTGTGCCGTTATTATTTCCGCTTTAA

Upstream 100 bases:

>100_bases
TGAAATTAACGAGAAGTTAAATGTAGAAAGCCCTTTATAAAGGGCTTTTTTTATAATATAAAAGGTATAATAACAAAGCC
TACCGGATAAGGAGAATTGA

Downstream 100 bases:

>100_bases
TCCTCTTCTTTAAACTGCAAGCGGTTGTTTTTACCGATTTTTTTGTAAAAACGACCGCTTGCCATTTTCCGGATAAACAG
TCTTTTGTCTTGCTTTGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MQTLLNYLPSFLQHPLFWVLAILIVAVVLFIQNKLRMDIIALLVMLAFSVSGILTTQEIFAGLSDPNIVLLALLYVVGEA
LARTGVAYQISDWLMRAAGSSETKVLVLMMLSIGLLGAFMSSTGIVAIFIPVALAICAEMNISPRRMMMPLSIAGLISGM
MTLIATAPNLVTHSELIKADYQGFGFFSFTPIGMTVLVLGILYMLVARRWLDNGDIPTLAKDDNSMSHLIEQYQLHGRAK
MVILQEGSPFIGKTMDELKLRSLYRMNVIAIQRYKNFRSQIMAAFGNDQLQEKDILLMDIGIDEDIFAMLCEECHLQPVE
LKGEYFSTHSKSVGMAEFVVMPETESIDKKVQELNFRPTYGLSVVGIKRENRILQDNLLKEPVKAGDVLLVMGVWQKIVA
LEKYNKDLFLLGMPKEGKQIAPSTSQAPYALFSVLLMVVLMISGIVPNVIAALICCLLLGKFRCIDMKSAYDSIHFPTLL
LIVGMMPFSTAMQKTGGVALMVEEFIRFTGGSETSYIFILIGLFALTAIVGLFISNTATAILMAPIAIEVARQLGYSPIA
LVMVITIASSAAFMTPISSPVNTMVIAPAGYRFMDFVKVGVPFTILVMFATVLIVPLLFPL

Sequences:

>Translated_621_residues
MQTLLNYLPSFLQHPLFWVLAILIVAVVLFIQNKLRMDIIALLVMLAFSVSGILTTQEIFAGLSDPNIVLLALLYVVGEA
LARTGVAYQISDWLMRAAGSSETKVLVLMMLSIGLLGAFMSSTGIVAIFIPVALAICAEMNISPRRMMMPLSIAGLISGM
MTLIATAPNLVTHSELIKADYQGFGFFSFTPIGMTVLVLGILYMLVARRWLDNGDIPTLAKDDNSMSHLIEQYQLHGRAK
MVILQEGSPFIGKTMDELKLRSLYRMNVIAIQRYKNFRSQIMAAFGNDQLQEKDILLMDIGIDEDIFAMLCEECHLQPVE
LKGEYFSTHSKSVGMAEFVVMPETESIDKKVQELNFRPTYGLSVVGIKRENRILQDNLLKEPVKAGDVLLVMGVWQKIVA
LEKYNKDLFLLGMPKEGKQIAPSTSQAPYALFSVLLMVVLMISGIVPNVIAALICCLLLGKFRCIDMKSAYDSIHFPTLL
LIVGMMPFSTAMQKTGGVALMVEEFIRFTGGSETSYIFILIGLFALTAIVGLFISNTATAILMAPIAIEVARQLGYSPIA
LVMVITIASSAAFMTPISSPVNTMVIAPAGYRFMDFVKVGVPFTILVMFATVLIVPLLFPL
>Mature_621_residues
MQTLLNYLPSFLQHPLFWVLAILIVAVVLFIQNKLRMDIIALLVMLAFSVSGILTTQEIFAGLSDPNIVLLALLYVVGEA
LARTGVAYQISDWLMRAAGSSETKVLVLMMLSIGLLGAFMSSTGIVAIFIPVALAICAEMNISPRRMMMPLSIAGLISGM
MTLIATAPNLVTHSELIKADYQGFGFFSFTPIGMTVLVLGILYMLVARRWLDNGDIPTLAKDDNSMSHLIEQYQLHGRAK
MVILQEGSPFIGKTMDELKLRSLYRMNVIAIQRYKNFRSQIMAAFGNDQLQEKDILLMDIGIDEDIFAMLCEECHLQPVE
LKGEYFSTHSKSVGMAEFVVMPETESIDKKVQELNFRPTYGLSVVGIKRENRILQDNLLKEPVKAGDVLLVMGVWQKIVA
LEKYNKDLFLLGMPKEGKQIAPSTSQAPYALFSVLLMVVLMISGIVPNVIAALICCLLLGKFRCIDMKSAYDSIHFPTLL
LIVGMMPFSTAMQKTGGVALMVEEFIRFTGGSETSYIFILIGLFALTAIVGLFISNTATAILMAPIAIEVARQLGYSPIA
LVMVITIASSAAFMTPISSPVNTMVIAPAGYRFMDFVKVGVPFTILVMFATVLIVPLLFPL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=608, Percent_Identity=52.1381578947368, Blast_Score=627, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 68314; Mature: 68314

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLLNYLPSFLQHPLFWVLAILIVAVVLFIQNKLRMDIIALLVMLAFSVSGILTTQEIF
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLSDPNIVLLALLYVVGEALARTGVAYQISDWLMRAAGSSETKVLVLMMLSIGLLGAFM
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SSTGIVAIFIPVALAICAEMNISPRRMMMPLSIAGLISGMMTLIATAPNLVTHSELIKAD
HCCCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YQGFGFFSFTPIGMTVLVLGILYMLVARRWLDNGDIPTLAKDDNSMSHLIEQYQLHGRAK
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
MVILQEGSPFIGKTMDELKLRSLYRMNVIAIQRYKNFRSQIMAAFGNDQLQEKDILLMDI
EEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
GIDEDIFAMLCEECHLQPVELKGEYFSTHSKSVGMAEFVVMPETESIDKKVQELNFRPTY
CCCHHHHHHHHHHHCCCCEEECCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCC
GLSVVGIKRENRILQDNLLKEPVKAGDVLLVMGVWQKIVALEKYNKDLFLLGMPKEGKQI
CCEEEEECCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
APSTSQAPYALFSVLLMVVLMISGIVPNVIAALICCLLLGKFRCIDMKSAYDSIHFPTLL
CCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHH
LIVGMMPFSTAMQKTGGVALMVEEFIRFTGGSETSYIFILIGLFALTAIVGLFISNTATA
HHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILMAPIAIEVARQLGYSPIALVMVITIASSAAFMTPISSPVNTMVIAPAGYRFMDFVKVG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCHHHHHHHHHC
VPFTILVMFATVLIVPLLFPL
CHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTLLNYLPSFLQHPLFWVLAILIVAVVLFIQNKLRMDIIALLVMLAFSVSGILTTQEIF
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLSDPNIVLLALLYVVGEALARTGVAYQISDWLMRAAGSSETKVLVLMMLSIGLLGAFM
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SSTGIVAIFIPVALAICAEMNISPRRMMMPLSIAGLISGMMTLIATAPNLVTHSELIKAD
HCCCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YQGFGFFSFTPIGMTVLVLGILYMLVARRWLDNGDIPTLAKDDNSMSHLIEQYQLHGRAK
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
MVILQEGSPFIGKTMDELKLRSLYRMNVIAIQRYKNFRSQIMAAFGNDQLQEKDILLMDI
EEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
GIDEDIFAMLCEECHLQPVELKGEYFSTHSKSVGMAEFVVMPETESIDKKVQELNFRPTY
CCCHHHHHHHHHHHCCCCEEECCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCC
GLSVVGIKRENRILQDNLLKEPVKAGDVLLVMGVWQKIVALEKYNKDLFLLGMPKEGKQI
CCEEEEECCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
APSTSQAPYALFSVLLMVVLMISGIVPNVIAALICCLLLGKFRCIDMKSAYDSIHFPTLL
CCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHH
LIVGMMPFSTAMQKTGGVALMVEEFIRFTGGSETSYIFILIGLFALTAIVGLFISNTATA
HHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILMAPIAIEVARQLGYSPIALVMVITIASSAAFMTPISSPVNTMVIAPAGYRFMDFVKVG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCHHHHHHHHHC
VPFTILVMFATVLIVPLLFPL
CHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]