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The map label for this gene is cbiM

Identifier: 126209086

GI number: 126209086

Start: 1845964

End: 1846572

Strand: Reverse

Name: cbiM

Synonym: APL_1622

Alternate gene names: NA

Gene position: 1846572-1845964 (Counterclockwise)

Preceding gene: 126209087

Following gene: 126209085

Centisome position: 81.19

GC content: 46.14

Gene sequence:

>609_bases
GTGCATTTGTCTGAAGGTGTTTTACATTCCACAACCCTGATTACCGGTGCGGTAATCGCACTGGCGGGAGTGGCAATCGG
TCTGCGTAAGTTAGATTACCGCCGCTTATCATTAACCGCTTTGTTTGCCTCGGCATTTTTTGTGGCGGGGACGATTCACG
TGCCGGTCGGGATAGGAAGCGTTCACCTTATCCTCAATGGGATGGCGGGATTATTTCTTGGGTGGACGGTATTTCCCGCT
TTTTTAATTGCGCTTTTATTGCAGGTTTTGTTGTTTTCGTTCGGCGGATTCTCCGTACTCGGCGTAAATTTATGCATTAT
GGCATTACCTGCATTATTGGTTCATTATCTTTTCCGCAATTCACTGAAACGAAATTTATCACGCAATTACCTGATCTTTA
CGGGTATTTGCGTGGGAACTATCGGAGTCGGCGGGGCGGCATTTTTGGCTTCGTTGGTGTTAGCGTTCGACGGCGGTAAG
GCTTATACCGATTTGATCGGCTTGCTTATTGTTTCTCATTTACCTATTTTTGTTGTCGATAGTATCGTAAGCGTGGGGGT
TGTATTGACGCTCACCAAAATGATGCCTTCCGCCTTACATTTCGATTAA

Upstream 100 bases:

>100_bases
AGATAAAATCTATTTATACGATATTTTAGGCGGAATCGGTTATATCTTCGGTTTATTCGGTCTTTTTGCGTTATTAAAAG
CGAAAAGGGAAAAGCAGTAA

Downstream 100 bases:

>100_bases
TTAGTCATGACGGTATTATTGCAACCACATTGGCGTTTAATTTATATCTTTGTCGCAGGGTTAGCGATTAGTGCGCTGCA
TTCCGTAAATCTTTTATTTA

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MHLSEGVLHSTTLITGAVIALAGVAIGLRKLDYRRLSLTALFASAFFVAGTIHVPVGIGSVHLILNGMAGLFLGWTVFPA
FLIALLLQVLLFSFGGFSVLGVNLCIMALPALLVHYLFRNSLKRNLSRNYLIFTGICVGTIGVGGAAFLASLVLAFDGGK
AYTDLIGLLIVSHLPIFVVDSIVSVGVVLTLTKMMPSALHFD

Sequences:

>Translated_202_residues
MHLSEGVLHSTTLITGAVIALAGVAIGLRKLDYRRLSLTALFASAFFVAGTIHVPVGIGSVHLILNGMAGLFLGWTVFPA
FLIALLLQVLLFSFGGFSVLGVNLCIMALPALLVHYLFRNSLKRNLSRNYLIFTGICVGTIGVGGAAFLASLVLAFDGGK
AYTDLIGLLIVSHLPIFVVDSIVSVGVVLTLTKMMPSALHFD
>Mature_202_residues
MHLSEGVLHSTTLITGAVIALAGVAIGLRKLDYRRLSLTALFASAFFVAGTIHVPVGIGSVHLILNGMAGLFLGWTVFPA
FLIALLLQVLLFSFGGFSVLGVNLCIMALPALLVHYLFRNSLKRNLSRNYLIFTGICVGTIGVGGAAFLASLVLAFDGGK
AYTDLIGLLIVSHLPIFVVDSIVSVGVVLTLTKMMPSALHFD

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 21341; Mature: 21341

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLSEGVLHSTTLITGAVIALAGVAIGLRKLDYRRLSLTALFASAFFVAGTIHVPVGIGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCH
VHLILNGMAGLFLGWTVFPAFLIALLLQVLLFSFGGFSVLGVNLCIMALPALLVHYLFRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLKRNLSRNYLIFTGICVGTIGVGGAAFLASLVLAFDGGKAYTDLIGLLIVSHLPIFVVD
HHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SIVSVGVVLTLTKMMPSALHFD
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHLSEGVLHSTTLITGAVIALAGVAIGLRKLDYRRLSLTALFASAFFVAGTIHVPVGIGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCH
VHLILNGMAGLFLGWTVFPAFLIALLLQVLLFSFGGFSVLGVNLCIMALPALLVHYLFRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLKRNLSRNYLIFTGICVGTIGVGGAAFLASLVLAFDGGKAYTDLIGLLIVSHLPIFVVD
HHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SIVSVGVVLTLTKMMPSALHFD
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]