Click here to switch to the map view.

The map label for this gene is yebE [C]

Identifier: 126209073

GI number: 126209073

Start: 1836354

End: 1836914

Strand: Reverse

Name: yebE [C]

Synonym: APL_1609

Alternate gene names: 126209073

Gene position: 1836914-1836354 (Counterclockwise)

Preceding gene: 126209074

Following gene: 126209072

Centisome position: 80.76

GC content: 48.48

Gene sequence:

>561_bases
ATGGATTTCAGCAAAATTTTAAATCAAGTGTTAAGCGTTGCACAAGAATCGGCAAAAAATGCGATGAACGGCAATACCAC
AACCGATAAAGTCGCCAAAATCGGCGGCGGTGCGGCGGCAATCGGCAGCCTTGCTTATCAGGCTTATCAAAAATATCAGC
AAAATCAAACGCAAGCCGCGCCGGTCAGCGAAGAAAATTTTGCGGTGACCGAACAAAATGCCCAAGCAAGCAGCCAAGTG
ATTTTACAAGCAATGATTGCTGCCGCAGCTTCTGACGGTGCGATTTCCGAAGAAGAAAGACAAGCGATTTTAGGCGAAGC
GGGACAAGATCCGGAACTTCATCAATGGATTGAACAAGCTATGTACCAGCCGGCAACCGTACAACAAATTGCGGCGCAAG
TCGGTAACAACCCGGCATTAGCGGCGCAAGTTTATTTAGCCGCTCGCGTGGTATGTGCCGATTTAGCTCGTAAAGAAATT
GTTTTCCTCGCCGACCTTGCCGAAGCGCTCGGTTTAGACGATGCGTTAGTGGAACGGCTAGAACAACAAGCTGGCTTCTA
A

Upstream 100 bases:

>100_bases
AATTTGCTTGGCAAACAACGGAACTTATTGCTAATTTGACGTACAAATAGGCACTTAGTTCGCTAAGCGTATTTACCCTC
AATCTTATTGGAGAAACCCT

Downstream 100 bases:

>100_bases
TTTCTAATATATATCAATAAGCGGTCGTATTTTCACCGGAATTTACGACCGTTTTTTTATTGTAAATCAACAACAGCATA
AAGCTCGGTTGATTCAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MDFSKILNQVLSVAQESAKNAMNGNTTTDKVAKIGGGAAAIGSLAYQAYQKYQQNQTQAAPVSEENFAVTEQNAQASSQV
ILQAMIAAAASDGAISEEERQAILGEAGQDPELHQWIEQAMYQPATVQQIAAQVGNNPALAAQVYLAARVVCADLARKEI
VFLADLAEALGLDDALVERLEQQAGF

Sequences:

>Translated_186_residues
MDFSKILNQVLSVAQESAKNAMNGNTTTDKVAKIGGGAAAIGSLAYQAYQKYQQNQTQAAPVSEENFAVTEQNAQASSQV
ILQAMIAAAASDGAISEEERQAILGEAGQDPELHQWIEQAMYQPATVQQIAAQVGNNPALAAQVYLAARVVCADLARKEI
VFLADLAEALGLDDALVERLEQQAGF
>Mature_186_residues
MDFSKILNQVLSVAQESAKNAMNGNTTTDKVAKIGGGAAAIGSLAYQAYQKYQQNQTQAAPVSEENFAVTEQNAQASSQV
ILQAMIAAAASDGAISEEERQAILGEAGQDPELHQWIEQAMYQPATVQQIAAQVGNNPALAAQVYLAARVVCADLARKEI
VFLADLAEALGLDDALVERLEQQAGF

Specific function: Unknown

COG id: COG2979

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19695; Mature: 19695

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSKILNQVLSVAQESAKNAMNGNTTTDKVAKIGGGAAAIGSLAYQAYQKYQQNQTQAA
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
PVSEENFAVTEQNAQASSQVILQAMIAAAASDGAISEEERQAILGEAGQDPELHQWIEQA
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
MYQPATVQQIAAQVGNNPALAAQVYLAARVVCADLARKEIVFLADLAEALGLDDALVERL
HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EQQAGF
HHHCCC
>Mature Secondary Structure
MDFSKILNQVLSVAQESAKNAMNGNTTTDKVAKIGGGAAAIGSLAYQAYQKYQQNQTQAA
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
PVSEENFAVTEQNAQASSQVILQAMIAAAASDGAISEEERQAILGEAGQDPELHQWIEQA
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
MYQPATVQQIAAQVGNNPALAAQVYLAARVVCADLARKEIVFLADLAEALGLDDALVERL
HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EQQAGF
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA