| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is cpxA [H]
Identifier: 126209049
GI number: 126209049
Start: 1812387
End: 1813037
Strand: Direct
Name: cpxA [H]
Synonym: APL_1585
Alternate gene names: 126209049
Gene position: 1812387-1813037 (Clockwise)
Preceding gene: 126209048
Following gene: 126209053
Centisome position: 79.68
GC content: 38.56
Gene sequence:
>651_bases ATGATTAGCGTAAAAAATGTGAGTAAAGATTACTATACTCGAAGCGGTAAAAAAACCGTATTGCAAGATATTAATTTTGA GCTGAAAAAAGGCGAGAAAATCGGTATTTTAGGGCGTAACGGTGCAGGGAAATCAACGCTAATCCGTTTGTTAAGTGGTG TTGAGCCGCCAACATCAGGTACTATCGAACGTAATATGTCGATATCTTGGCCGCTCGCTTTCAGCGGGGCGTTCCAAGGC AGTTTAACCGGTATGGATAATTTACGCTTTATTTGCCGTATATATAATGCGGATATTGAATACGTTAAAGCCTTTACCGA AGAATTTTCCGAATTGGGTGATTATTTATATGAGCCGGTTAAGAAATATTCCTCCGGTATGAAAGCCCGACTTGCCTTTG CTTTGTCACTTTCGGTAGAGTTTGATTGCTACTTAATTGATGAAGTGATTGCTGTGGGCGATTCCCGTTTTGCGGCAAAA TGTAAACATGAATTATTTGAAAAGCGCAAAGATCGTTCGATTATTTTGGTTTCACATAGCCCGTCTGCAATGAAAGAATA TTGCGATAATGCAATGGTATTGGATAAAGGGATTATGTATAAATTTGAGAATATGGACGAGGCTTACAAGTTCTATAATT CAACGCTTTAA
Upstream 100 bases:
>100_bases TCACATATGAAAGTATAAGCTATCTCGTAATATGTGATGTAGCCATGTTACTTTTTGGGCTCATTATGGTAAAAAACTTC AGTAAAGGAATCGAACCGCA
Downstream 100 bases:
>100_bases AGTCCCACATATCCCCCCTCTTTAGCAAAGAGGGGCTGGGGGAGATTTGACAGAATAAATTAGCGAAGAAATATGCTAAT TAACGCTTTTATAAATATAA
Product: ATP-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MISVKNVSKDYYTRSGKKTVLQDINFELKKGEKIGILGRNGAGKSTLIRLLSGVEPPTSGTIERNMSISWPLAFSGAFQG SLTGMDNLRFICRIYNADIEYVKAFTEEFSELGDYLYEPVKKYSSGMKARLAFALSLSVEFDCYLIDEVIAVGDSRFAAK CKHELFEKRKDRSIILVSHSPSAMKEYCDNAMVLDKGIMYKFENMDEAYKFYNSTL
Sequences:
>Translated_216_residues MISVKNVSKDYYTRSGKKTVLQDINFELKKGEKIGILGRNGAGKSTLIRLLSGVEPPTSGTIERNMSISWPLAFSGAFQG SLTGMDNLRFICRIYNADIEYVKAFTEEFSELGDYLYEPVKKYSSGMKARLAFALSLSVEFDCYLIDEVIAVGDSRFAAK CKHELFEKRKDRSIILVSHSPSAMKEYCDNAMVLDKGIMYKFENMDEAYKFYNSTL >Mature_216_residues MISVKNVSKDYYTRSGKKTVLQDINFELKKGEKIGILGRNGAGKSTLIRLLSGVEPPTSGTIERNMSISWPLAFSGAFQG SLTGMDNLRFICRIYNADIEYVKAFTEEFSELGDYLYEPVKKYSSGMKARLAFALSLSVEFDCYLIDEVIAVGDSRFAAK CKHELFEKRKDRSIILVSHSPSAMKEYCDNAMVLDKGIMYKFENMDEAYKFYNSTL
Specific function: Putative ATP-binding protein, and an energy-coupling component of capsule polysaccharide export apparatus [H]
COG id: COG1134
COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27436953, Length=202, Percent_Identity=27.7227722772277, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI27477115, Length=205, Percent_Identity=27.3170731707317, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI27262624, Length=237, Percent_Identity=28.6919831223629, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI27262626, Length=237, Percent_Identity=28.6919831223629, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI153792144, Length=218, Percent_Identity=27.0642201834862, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI6005701, Length=201, Percent_Identity=26.865671641791, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI1790467, Length=225, Percent_Identity=27.5555555555556, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1788761, Length=230, Percent_Identity=25.2173913043478, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789751, Length=217, Percent_Identity=27.6497695852535, Blast_Score=74, Evalue=5e-15, Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=24.1071428571429, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787547, Length=226, Percent_Identity=26.5486725663717, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787758, Length=215, Percent_Identity=25.5813953488372, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI2367384, Length=157, Percent_Identity=32.484076433121, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=25.9090909090909, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788165, Length=203, Percent_Identity=28.0788177339901, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786398, Length=245, Percent_Identity=25.7142857142857, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI87081782, Length=163, Percent_Identity=31.2883435582822, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71992290, Length=238, Percent_Identity=26.0504201680672, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17510237, Length=210, Percent_Identity=26.1904761904762, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI28573573, Length=214, Percent_Identity=28.9719626168224, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI28573571, Length=214, Percent_Identity=28.9719626168224, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI62484234, Length=193, Percent_Identity=31.0880829015544, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24432; Mature: 24432
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVKNVSKDYYTRSGKKTVLQDINFELKKGEKIGILGRNGAGKSTLIRLLSGVEPPTSG CCCCCCCCHHHHHCCCCHHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC TIERNMSISWPLAFSGAFQGSLTGMDNLRFICRIYNADIEYVKAFTEEFSELGDYLYEPV CEECCCEEECCEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH KKYSSGMKARLAFALSLSVEFDCYLIDEVIAVGDSRFAAKCKHELFEKRKDRSIILVSHS HHHHCCHHEEEEEEEEEEEEECCEEHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECC PSAMKEYCDNAMVLDKGIMYKFENMDEAYKFYNSTL CHHHHHHCCCCEEECCCCEEEECCHHHHHHHHHCCC >Mature Secondary Structure MISVKNVSKDYYTRSGKKTVLQDINFELKKGEKIGILGRNGAGKSTLIRLLSGVEPPTSG CCCCCCCCHHHHHCCCCHHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC TIERNMSISWPLAFSGAFQGSLTGMDNLRFICRIYNADIEYVKAFTEEFSELGDYLYEPV CEECCCEEECCEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH KKYSSGMKARLAFALSLSVEFDCYLIDEVIAVGDSRFAAKCKHELFEKRKDRSIILVSHS HHHHCCHHEEEEEEEEEEEEECCEEHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECC PSAMKEYCDNAMVLDKGIMYKFENMDEAYKFYNSTL CHHHHHHCCCCEEECCCCEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3284653; 2082145 [H]