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The map label for this gene is ydeN [H]

Identifier: 126209038

GI number: 126209038

Start: 1801340

End: 1801882

Strand: Direct

Name: ydeN [H]

Synonym: APL_1574

Alternate gene names: 126209038

Gene position: 1801340-1801882 (Clockwise)

Preceding gene: 126209027

Following gene: 126209046

Centisome position: 79.2

GC content: 40.33

Gene sequence:

>543_bases
ATGAAAAAAGTATATGTAACGCACGGTTATACGGCGAACCCGACAAGAAATTGGTTTCCGTGGCTTAAAAACGAATTGGA
AAAATTAGGATGGGAATGTGAATGTTTAGTGATGCCGAATTCCGATCAGCCGAATCCGCAAGCATGGCTGGAACATCACC
AAAATACACTTCAATTAGATGAAAATACCTTACTCATCGGACATAGTTTGGGCTGCATTGCGTTACTGAATTATCTGGCG
GTAACGCAGCAAAAAGTAAAAACGGCAATTTTTGTTTCCGGCTTTTATGAGAAATTACCAACTTTGCCGGAATTAGATAG
CTTTGCAGATTTTTATGCAAATCAGACCGCTTGTTTACCGCAAAAGTCTTACGTCATATCTGCATTAAATGATGTTGTCG
TTCCCCATTCGTTCAGCGATCGATTAGCGCAATACTTACAAGCGGATTATATTCGCTTGGCAACGGGCGGGCATTTTGTC
GATCGAGAGGGAGTAACGGAATTACCGGTTTTATTGGAGTTAATCAAACAAATATCAAACTAA

Upstream 100 bases:

>100_bases
GTCAATTTGTGACGGAGATCTCACTTTTCAAGGCTGATTTTTTAGGCTAAATTAACCGTGAAGCAAACGTTTTCGAAATA
AAAATAAAGCAGAGGAAAGA

Downstream 100 bases:

>100_bases
TAAAAAGAGCTGCCGATAACGATTTACCGACAGCTCGTTTTTATACTCTTTAACGTCACACTAACCGCAAATTACAGTAA
TAGCATCGAACCCCATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKKVYVTHGYTANPTRNWFPWLKNELEKLGWECECLVMPNSDQPNPQAWLEHHQNTLQLDENTLLIGHSLGCIALLNYLA
VTQQKVKTAIFVSGFYEKLPTLPELDSFADFYANQTACLPQKSYVISALNDVVVPHSFSDRLAQYLQADYIRLATGGHFV
DREGVTELPVLLELIKQISN

Sequences:

>Translated_180_residues
MKKVYVTHGYTANPTRNWFPWLKNELEKLGWECECLVMPNSDQPNPQAWLEHHQNTLQLDENTLLIGHSLGCIALLNYLA
VTQQKVKTAIFVSGFYEKLPTLPELDSFADFYANQTACLPQKSYVISALNDVVVPHSFSDRLAQYLQADYIRLATGGHFV
DREGVTELPVLLELIKQISN
>Mature_180_residues
MKKVYVTHGYTANPTRNWFPWLKNELEKLGWECECLVMPNSDQPNPQAWLEHHQNTLQLDENTLLIGHSLGCIALLNYLA
VTQQKVKTAIFVSGFYEKLPTLPELDSFADFYANQTACLPQKSYVISALNDVVVPHSFSDRLAQYLQADYIRLATGGHFV
DREGVTELPVLLELIKQISN

Specific function: Unknown

COG id: COG3545

COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RBBP9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010662 [H]

Pfam domain/function: PF06821 DUF1234 [H]

EC number: NA

Molecular weight: Translated: 20467; Mature: 20467

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVYVTHGYTANPTRNWFPWLKNELEKLGWECECLVMPNSDQPNPQAWLEHHQNTLQLD
CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEC
ENTLLIGHSLGCIALLNYLAVTQQKVKTAIFVSGFYEKLPTLPELDSFADFYANQTACLP
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
QKSYVISALNDVVVPHSFSDRLAQYLQADYIRLATGGHFVDREGVTELPVLLELIKQISN
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKVYVTHGYTANPTRNWFPWLKNELEKLGWECECLVMPNSDQPNPQAWLEHHQNTLQLD
CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEC
ENTLLIGHSLGCIALLNYLAVTQQKVKTAIFVSGFYEKLPTLPELDSFADFYANQTACLP
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
QKSYVISALNDVVVPHSFSDRLAQYLQADYIRLATGGHFVDREGVTELPVLLELIKQISN
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]