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The map label for this gene is afuB [H]

Identifier: 126208911

GI number: 126208911

Start: 1657959

End: 1660022

Strand: Direct

Name: afuB [H]

Synonym: APL_1447

Alternate gene names: 126208911

Gene position: 1657959-1660022 (Clockwise)

Preceding gene: 126208910

Following gene: 126208912

Centisome position: 72.89

GC content: 41.67

Gene sequence:

>2064_bases
ATGGATTCTATTACAAATAAAAGATCGCTGTTTGAATCTAGCCACTTTTGGATTCTGCTCTCACTTATTGCATTTATTGC
TCTCCCGTCCAAAGCTCTAGATTACGGCTTATTGGAGAGTACCGCAGATGAATTTCTCGATGCGATGGGTTGGTCTTCCG
TCAATCTGACGATACTTTGGTTTTTACCTTTGATCGGTTTTTGGCTACTGCCTTCTTTAAAACTTTCGACCGAAACGCAA
GCAAAAGTCGAATTAGGTTTAATTTCTTTCATACTATTATTCGCCTTTATTTCGGCAACGATTTATAAGGTCAGTATGGG
CTATTCGGTTATCGTATTAATTGCCACCTTAACCGCACTTGCCACCTTTGCTTTTGCTAAACTCAAAATGATGCAAGGCG
ATAAATTTATTATTGCCGCATTGCTCAGTATCATCTTGCTGATTTTCTTTTTTATCGTTTATCCGACCGTTGCGATTTTT
ATTTCGATGTTTTATGACGGAGAAACGTTCGCACCGGAACAAGTGGTCAGAATTTTAGGGCAGGGTTATATTGTTCGAGT
AATCAGTAACTCTTTATTCCTTTCCGGCTTTGTCGGCATTGTTTCAACCGTTTTCGGTTTAGCGTTTGCGCTTTATACTA
CTCGTATCGCTCACCGTACCGCCTTTATCGGGAAAATTTTCTCAATCCTACCGATTGTGACACCGCCGTTTGTGGTGGGT
CTTGGCGTAACTTTAATGCTTGGTCGTTCGGGCTACGTGACCGAATTTTTAGATACCTATTTCGGCTTTAAAGATCATAA
CTGGCTGTATGGTTTTAACGGGATTGCGATTGCTCAGATTCTTGCTTTCGCCCCGATTTCATTTATGATTTTAGACGGTG
CGTTAAAATCAATTCACCCTTCGATTGAAGAAGCGTCTTATACGTTACGAGCAAACCGCTATCAAACTTTCTACAACATT
ATTTTCCCGTTATTACGTCCGGCATTGGCAAATTCATTTTTAATCGTGTTTATCCAATCGCTCGCCGACTTCAGTAACCC
ATTGGTTTTAGGCGGTAGCTTTGACGTAATCGCTACTCAAATTTATTTCTATATTGCCGGCTCACAATTAGATTATGCTT
CGGCAAGTACCTTAGGTTCGATGTTGCTGATTTTCTCATTACTGATCTTTATCGTTCAGTATATGTGGATTGGTAATCGC
TCTTATGTGACCGTTTCCGGTAAATCTTATCGTGGCGATGTGCAAGATTTACCAAGCGGTTTGAAATATACCATTATTGT
AATGTTGGGCTTCTGGGTCGTCTTTAACTTTGCGTTATACGGCAGCATTTTCTACGGTAGCTTCACGGTAAACTGGGGGG
TAGATTACACCCTAACCTTAAATAACTATGCGATGTTATTCGGGCAAGGTTTAAGTGACGGGGCGTGGCCGTCTTTAATC
AATACCATGATTTACGCCGGTATTGCCGCACCGCTCACTGCGTTATTCGGTTTATTAATCGCTTATATTGTGGTGCGTAA
AGATTTCCAAGGTAAGAAAACTCTTGAGTTCTTAACTATGCTGTGCTTTGCCGTACCGGGTACGGTTGCCGGTGTGTCTT
ATATTCTCGCCTTTAATGATGCGCCAATGTATATTACCGGCACCGGTATCATCATTATTATTTCAATGGTAATGCGAGAT
TTACCGATCGGTATGCGTGCGGCAATTGCGGGACTTGGGCAGTTGGATAAATCATTGGATGAAGCCTCATTATCATTAAA
AGGCAGTTCGTTAAAAACCATTTGGTTTATCGTCTTCCCATTATTGAAACCGGCATTGTTATCCGCATTAGTGACCAGTT
TCGTACGTGCGATGACAACCGTGAGTGCGATTGTGTTCCTTGTGACCGCAGATACTCGTGTTGCAACCGCTTATATTTTA
AACCGTGTGGAAGACGGTGAGTACGGGGTGGCTATCGCATACGGTTCAATCTTAATTGTTGTGATGATGGCGATCATTTT
ATTCTTCGACTGGATTGTCGGGGACACTCGTATCGCAAAATCAAAAGCGAAAAAAGCAGATTAA

Upstream 100 bases:

>100_bases
TCGCCTTTGATAAGCGGTCGTTTTTCGCAAAAAATTTGCAAAAAATCAGCGAAAACGACCGCTTGCTTTTCAATATTTTT
ATTAGTTGTTGTGAGGCTAT

Downstream 100 bases:

>100_bases
TTCGTCCCGGGCGGTATTGTCGCTCGTGTATAAAAGGCAAAATATTATGAACAACGATTTCTTAGTACTGAAAAATATTA
CCAAATCTTTCGGTAAAGCA

Product: ferric transport system permease protein fbpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 687

Protein sequence:

>687_residues
MDSITNKRSLFESSHFWILLSLIAFIALPSKALDYGLLESTADEFLDAMGWSSVNLTILWFLPLIGFWLLPSLKLSTETQ
AKVELGLISFILLFAFISATIYKVSMGYSVIVLIATLTALATFAFAKLKMMQGDKFIIAALLSIILLIFFFIVYPTVAIF
ISMFYDGETFAPEQVVRILGQGYIVRVISNSLFLSGFVGIVSTVFGLAFALYTTRIAHRTAFIGKIFSILPIVTPPFVVG
LGVTLMLGRSGYVTEFLDTYFGFKDHNWLYGFNGIAIAQILAFAPISFMILDGALKSIHPSIEEASYTLRANRYQTFYNI
IFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQIYFYIAGSQLDYASASTLGSMLLIFSLLIFIVQYMWIGNR
SYVTVSGKSYRGDVQDLPSGLKYTIIVMLGFWVVFNFALYGSIFYGSFTVNWGVDYTLTLNNYAMLFGQGLSDGAWPSLI
NTMIYAGIAAPLTALFGLLIAYIVVRKDFQGKKTLEFLTMLCFAVPGTVAGVSYILAFNDAPMYITGTGIIIIISMVMRD
LPIGMRAAIAGLGQLDKSLDEASLSLKGSSLKTIWFIVFPLLKPALLSALVTSFVRAMTTVSAIVFLVTADTRVATAYIL
NRVEDGEYGVAIAYGSILIVVMMAIILFFDWIVGDTRIAKSKAKKAD

Sequences:

>Translated_687_residues
MDSITNKRSLFESSHFWILLSLIAFIALPSKALDYGLLESTADEFLDAMGWSSVNLTILWFLPLIGFWLLPSLKLSTETQ
AKVELGLISFILLFAFISATIYKVSMGYSVIVLIATLTALATFAFAKLKMMQGDKFIIAALLSIILLIFFFIVYPTVAIF
ISMFYDGETFAPEQVVRILGQGYIVRVISNSLFLSGFVGIVSTVFGLAFALYTTRIAHRTAFIGKIFSILPIVTPPFVVG
LGVTLMLGRSGYVTEFLDTYFGFKDHNWLYGFNGIAIAQILAFAPISFMILDGALKSIHPSIEEASYTLRANRYQTFYNI
IFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQIYFYIAGSQLDYASASTLGSMLLIFSLLIFIVQYMWIGNR
SYVTVSGKSYRGDVQDLPSGLKYTIIVMLGFWVVFNFALYGSIFYGSFTVNWGVDYTLTLNNYAMLFGQGLSDGAWPSLI
NTMIYAGIAAPLTALFGLLIAYIVVRKDFQGKKTLEFLTMLCFAVPGTVAGVSYILAFNDAPMYITGTGIIIIISMVMRD
LPIGMRAAIAGLGQLDKSLDEASLSLKGSSLKTIWFIVFPLLKPALLSALVTSFVRAMTTVSAIVFLVTADTRVATAYIL
NRVEDGEYGVAIAYGSILIVVMMAIILFFDWIVGDTRIAKSKAKKAD
>Mature_687_residues
MDSITNKRSLFESSHFWILLSLIAFIALPSKALDYGLLESTADEFLDAMGWSSVNLTILWFLPLIGFWLLPSLKLSTETQ
AKVELGLISFILLFAFISATIYKVSMGYSVIVLIATLTALATFAFAKLKMMQGDKFIIAALLSIILLIFFFIVYPTVAIF
ISMFYDGETFAPEQVVRILGQGYIVRVISNSLFLSGFVGIVSTVFGLAFALYTTRIAHRTAFIGKIFSILPIVTPPFVVG
LGVTLMLGRSGYVTEFLDTYFGFKDHNWLYGFNGIAIAQILAFAPISFMILDGALKSIHPSIEEASYTLRANRYQTFYNI
IFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQIYFYIAGSQLDYASASTLGSMLLIFSLLIFIVQYMWIGNR
SYVTVSGKSYRGDVQDLPSGLKYTIIVMLGFWVVFNFALYGSIFYGSFTVNWGVDYTLTLNNYAMLFGQGLSDGAWPSLI
NTMIYAGIAAPLTALFGLLIAYIVVRKDFQGKKTLEFLTMLCFAVPGTVAGVSYILAFNDAPMYITGTGIIIIISMVMRD
LPIGMRAAIAGLGQLDKSLDEASLSLKGSSLKTIWFIVFPLLKPALLSALVTSFVRAMTTVSAIVFLVTADTRVATAYIL
NRVEDGEYGVAIAYGSILIVVMMAIILFFDWIVGDTRIAKSKAKKAD

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

Organism=Escherichia coli, GI1788764, Length=190, Percent_Identity=27.8947368421053, Blast_Score=73, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 75593; Mature: 75593

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSITNKRSLFESSHFWILLSLIAFIALPSKALDYGLLESTADEFLDAMGWSSVNLTILW
CCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FLPLIGFWLLPSLKLSTETQAKVELGLISFILLFAFISATIYKVSMGYSVIVLIATLTAL
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ATFAFAKLKMMQGDKFIIAALLSIILLIFFFIVYPTVAIFISMFYDGETFAPEQVVRILG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
QGYIVRVISNSLFLSGFVGIVSTVFGLAFALYTTRIAHRTAFIGKIFSILPIVTPPFVVG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LGVTLMLGRSGYVTEFLDTYFGFKDHNWLYGFNGIAIAQILAFAPISFMILDGALKSIHP
CCHHHEECCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHCC
SIEEASYTLRANRYQTFYNIIFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH
IYFYIAGSQLDYASASTLGSMLLIFSLLIFIVQYMWIGNRSYVTVSGKSYRGDVQDLPSG
HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCC
LKYTIIVMLGFWVVFNFALYGSIFYGSFTVNWGVDYTLTLNNYAMLFGQGLSDGAWPSLI
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHH
NTMIYAGIAAPLTALFGLLIAYIVVRKDFQGKKTLEFLTMLCFAVPGTVAGVSYILAFND
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHEEEEECC
APMYITGTGIIIIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSLKTIWFIVFP
CCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
LLKPALLSALVTSFVRAMTTVSAIVFLVTADTRVATAYILNRVEDGEYGVAIAYGSILIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCEEEEHHHHHHHH
VMMAIILFFDWIVGDTRIAKSKAKKAD
HHHHHHHHHHHHHCCHHHHHHHCCCCC
>Mature Secondary Structure
MDSITNKRSLFESSHFWILLSLIAFIALPSKALDYGLLESTADEFLDAMGWSSVNLTILW
CCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FLPLIGFWLLPSLKLSTETQAKVELGLISFILLFAFISATIYKVSMGYSVIVLIATLTAL
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ATFAFAKLKMMQGDKFIIAALLSIILLIFFFIVYPTVAIFISMFYDGETFAPEQVVRILG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
QGYIVRVISNSLFLSGFVGIVSTVFGLAFALYTTRIAHRTAFIGKIFSILPIVTPPFVVG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LGVTLMLGRSGYVTEFLDTYFGFKDHNWLYGFNGIAIAQILAFAPISFMILDGALKSIHP
CCHHHEECCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHCC
SIEEASYTLRANRYQTFYNIIFPLLRPALANSFLIVFIQSLADFSNPLVLGGSFDVIATQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH
IYFYIAGSQLDYASASTLGSMLLIFSLLIFIVQYMWIGNRSYVTVSGKSYRGDVQDLPSG
HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCC
LKYTIIVMLGFWVVFNFALYGSIFYGSFTVNWGVDYTLTLNNYAMLFGQGLSDGAWPSLI
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHH
NTMIYAGIAAPLTALFGLLIAYIVVRKDFQGKKTLEFLTMLCFAVPGTVAGVSYILAFND
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHEEEEECC
APMYITGTGIIIIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSLKTIWFIVFP
CCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
LLKPALLSALVTSFVRAMTTVSAIVFLVTADTRVATAYILNRVEDGEYGVAIAYGSILIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCEEEEHHHHHHHH
VMMAIILFFDWIVGDTRIAKSKAKKAD
HHHHHHHHHHHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8807793 [H]