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The map label for this gene is phnA [H]

Identifier: 126208842

GI number: 126208842

Start: 1580872

End: 1581195

Strand: Direct

Name: phnA [H]

Synonym: APL_1378

Alternate gene names: 126208842

Gene position: 1580872-1581195 (Clockwise)

Preceding gene: 126208841

Following gene: 126208843

Centisome position: 69.5

GC content: 37.04

Gene sequence:

>324_bases
ATGACATACCCTGTTTGCCCTAAATGCAAGAGCGAAAATACTTATCACGATTCCATCCAATTCATTTGTCCCGATTGCGC
GTACGAATGGAACGGCGAAGAAATTGAAGAACAAGATGAAGACCAATTAATCGTTAAAGACAGCAACGGTAATTTATTAG
CTGACGGTGACGATGTACTTTTAATTAAAGATTTGAAATTAAAAGGCTCGTCCGAAGTATTAAAAAAAGGCACTAAATTC
AAAGGTATCCGCTTAGTAAACGGTGATCATAACGTAGATTGCGGTAAAATTATGCTTAAATCGGAATTCCTGAAAAAAGC
CTGA

Upstream 100 bases:

>100_bases
TGAGGAAATTTTTGCAAATTTATCTTCAAAACCGACCGCTTACTTTTTATGGCGTTTCATTATAAAATAACGACCTTTTA
TAACCTTGAGGATTTATTTT

Downstream 100 bases:

>100_bases
TTTACTCGTTATTTCGATTCATTTTAAACGCTCACTTCGGTGGGCGTTTTTCTTTCATTGCTTATACTTATCATTGAGAT
AGTTATTATAGATTAAAACT

Product: alkylphosphonate uptake protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTYPVCPKCKSENTYHDSIQFICPDCAYEWNGEEIEEQDEDQLIVKDSNGNLLADGDDVLLIKDLKLKGSSEVLKKGTKF
KGIRLVNGDHNVDCGKIMLKSEFLKKA

Sequences:

>Translated_107_residues
MTYPVCPKCKSENTYHDSIQFICPDCAYEWNGEEIEEQDEDQLIVKDSNGNLLADGDDVLLIKDLKLKGSSEVLKKGTKF
KGIRLVNGDHNVDCGKIMLKSEFLKKA
>Mature_106_residues
TYPVCPKCKSENTYHDSIQFICPDCAYEWNGEEIEEQDEDQLIVKDSNGNLLADGDDVLLIKDLKLKGSSEVLKKGTKFK
GIRLVNGDHNVDCGKIMLKSEFLKKA

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=111, Percent_Identity=63.963963963964, Blast_Score=139, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 12054; Mature: 11923

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYPVCPKCKSENTYHDSIQFICPDCAYEWNGEEIEEQDEDQLIVKDSNGNLLADGDDVL
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCEE
LIKDLKLKGSSEVLKKGTKFKGIRLVNGDHNVDCGKIMLKSEFLKKA
EEEECCCCCCHHHHHCCCCCCCEEEECCCCCCCHHHEEEHHHHHHCC
>Mature Secondary Structure 
TYPVCPKCKSENTYHDSIQFICPDCAYEWNGEEIEEQDEDQLIVKDSNGNLLADGDDVL
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCEE
LIKDLKLKGSSEVLKKGTKFKGIRLVNGDHNVDCGKIMLKSEFLKKA
EEEECCCCCCHHHHHCCCCCCCEEEECCCCCCCHHHEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]