Click here to switch to the map view.

The map label for this gene is oadB [H]

Identifier: 126208841

GI number: 126208841

Start: 1579435

End: 1580739

Strand: Direct

Name: oadB [H]

Synonym: APL_1377

Alternate gene names: 126208841

Gene position: 1579435-1580739 (Clockwise)

Preceding gene: 126208840

Following gene: 126208842

Centisome position: 69.44

GC content: 45.9

Gene sequence:

>1305_bases
ATGGAAGGTATTATCGCTCTGTTTCAGGGTATGGGTATTATGCATATGGAGCTAGGGCAAGCGATTATGATTGCGGTCAG
CCTGTTATTGCTCTGGCTTGCAATTGCCCGCGGCTTTGAACCACTCCTTTTATTACCAATCGGCTTTGGCGGTTTATTAT
CCAATATTCCAGAAGCCGGCTTGGCTATGACCGCTTTAGATAATCTGCTACATCACGGCACAACCGAACAGTTTGCGATT
ATTGCGGCAAAAGTTAATAGCACAAGCTTAGATCTTGAGAATATTAAAGCTGCGATTGCCTTAGCGGCACCTTCGGTACA
AAACGAATTGGAAGTGATTGCCGGAGATATGGGTTATACTGCCGGTGTGTTAGCACTCTTCTATAAAGTGGCGATTGGCT
ACGGTGTTGCACCGTTAATCATCTTTATGGGAGTCGGTGCAATGACGGATTTTGGTCCGTTACTCGCAAACCCTCGTACA
CTCTTATTAGGTGCTGCGGCACAATTCGGTATTTTTGCAACCGTACTTGGCGCTTTAGGTTTGAACTGGTTAGGTATTAT
TGACTTTACCTTACCACAAGCGGCGGCGATCGGTATTATCGGCGGTGCGGACGGCCCGACCGCTATCTATCTAGCAAGTA
AACTTGCGCCGGAGTTACTCGGTGCGATTGCAGTGGCAGCTTACTCTTATATGGCGTTAGTGCCGTTAATTCAGCCGCCG
ATTATGAAAGCGTTAACTACAGATGCCGAACGTAAAATCCGTATGGTGCAATTACGCACGGTAAGTAACCGAGAAAAAAT
TCTGTTCCCGATTCTCTTGCTCTTACTCGTGGCATTATTGTTGCCGGATGCAGCACCGTTACTCGGTATGTTCTGTTTCG
GTAACTTAATGCGTGTCAGTGGCGTGGTGGAACGTTTGAATGATACGGCACAAAATGCGCTAATTAATATCGTAACGATT
TTCCTTGGTTTATCGGTCGGAGCAAAATTAGTGGCGGATAAATTCTTACAACCACAGACACTCGGTATCTTATTATTAGG
TATCGTAGCGTTCTGTATTGGTACGGCAAGCGGCGTGTTAATGGCGAAATTGATGAATAAATTCAGCAAAAACAAAATTA
ACCCGCTTATCGGTTCTGCCGGTGTCTCTGCCGTACCGATGGCGGCTCGCGTGTCAAATAAAGTCGGTTTGGAATATGAC
AAACAAAACTTCTTATTAATGCACGCTATGGGACCGAACGTAGCCGGTGTAATCGGCTCCGCTATCGCAGCCGGCGTTAT
GTTGAAATATATTGCGGCAATGTAA

Upstream 100 bases:

>100_bases
CCAAAAGCCGGTAAAGTTCAAGGCGTTGCGGTAAAACAAGGTGATGTCGTTGCCGTTGATCAAGTCTTAATGAATCTTGC
TTAAACGATAGGGAGTTAAT

Downstream 100 bases:

>100_bases
TCGCTATATTTACATCATTAAGCGGTCGTTTTTGAGGAAATTTTTGCAAATTTATCTTCAAAACCGACCGCTTACTTTTT
ATGGCGTTTCATTATAAAAT

Product: oxaloacetate decarboxylase beta chain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MEGIIALFQGMGIMHMELGQAIMIAVSLLLLWLAIARGFEPLLLLPIGFGGLLSNIPEAGLAMTALDNLLHHGTTEQFAI
IAAKVNSTSLDLENIKAAIALAAPSVQNELEVIAGDMGYTAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRT
LLLGAAAQFGIFATVLGALGLNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPP
IMKALTTDAERKIRMVQLRTVSNREKILFPILLLLLVALLLPDAAPLLGMFCFGNLMRVSGVVERLNDTAQNALINIVTI
FLGLSVGAKLVADKFLQPQTLGILLLGIVAFCIGTASGVLMAKLMNKFSKNKINPLIGSAGVSAVPMAARVSNKVGLEYD
KQNFLLMHAMGPNVAGVIGSAIAAGVMLKYIAAM

Sequences:

>Translated_434_residues
MEGIIALFQGMGIMHMELGQAIMIAVSLLLLWLAIARGFEPLLLLPIGFGGLLSNIPEAGLAMTALDNLLHHGTTEQFAI
IAAKVNSTSLDLENIKAAIALAAPSVQNELEVIAGDMGYTAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRT
LLLGAAAQFGIFATVLGALGLNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPP
IMKALTTDAERKIRMVQLRTVSNREKILFPILLLLLVALLLPDAAPLLGMFCFGNLMRVSGVVERLNDTAQNALINIVTI
FLGLSVGAKLVADKFLQPQTLGILLLGIVAFCIGTASGVLMAKLMNKFSKNKINPLIGSAGVSAVPMAARVSNKVGLEYD
KQNFLLMHAMGPNVAGVIGSAIAAGVMLKYIAAM
>Mature_434_residues
MEGIIALFQGMGIMHMELGQAIMIAVSLLLLWLAIARGFEPLLLLPIGFGGLLSNIPEAGLAMTALDNLLHHGTTEQFAI
IAAKVNSTSLDLENIKAAIALAAPSVQNELEVIAGDMGYTAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRT
LLLGAAAQFGIFATVLGALGLNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPP
IMKALTTDAERKIRMVQLRTVSNREKILFPILLLLLVALLLPDAAPLLGMFCFGNLMRVSGVVERLNDTAQNALINIVTI
FLGLSVGAKLVADKFLQPQTLGILLLGIVAFCIGTASGVLMAKLMNKFSKNKINPLIGSAGVSAVPMAARVSNKVGLEYD
KQNFLLMHAMGPNVAGVIGSAIAAGVMLKYIAAM

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 45326; Mature: 45326

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGIIALFQGMGIMHMELGQAIMIAVSLLLLWLAIARGFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCH
LAMTALDNLLHHGTTEQFAIIAAKVNSTSLDLENIKAAIALAAPSVQNELEVIAGDMGYT
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHH
AGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALG
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCHHHHCCCHHHEEEHHHHHHHHHHHHHHHC
LNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPP
CCHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
IMKALTTDAERKIRMVQLRTVSNREKILFPILLLLLVALLLPDAAPLLGMFCFGNLMRVS
HHHHHHCCHHHHEEHEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GVVERLNDTAQNALINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGIVAFCIGTASGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MAKLMNKFSKNKINPLIGSAGVSAVPMAARVSNKVGLEYDKQNFLLMHAMGPNVAGVIGS
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCEEEEEECCCCHHHHHHH
AIAAGVMLKYIAAM
HHHHHHHHHHHHCC
>Mature Secondary Structure
MEGIIALFQGMGIMHMELGQAIMIAVSLLLLWLAIARGFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCH
LAMTALDNLLHHGTTEQFAIIAAKVNSTSLDLENIKAAIALAAPSVQNELEVIAGDMGYT
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHH
AGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALG
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCHHHHCCCHHHEEEHHHHHHHHHHHHHHHC
LNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPP
CCHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
IMKALTTDAERKIRMVQLRTVSNREKILFPILLLLLVALLLPDAAPLLGMFCFGNLMRVS
HHHHHHCCHHHHEEHEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GVVERLNDTAQNALINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGIVAFCIGTASGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MAKLMNKFSKNKINPLIGSAGVSAVPMAARVSNKVGLEYDKQNFLLMHAMGPNVAGVIGS
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCEEEEEECCCCHHHHHHH
AIAAGVMLKYIAAM
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA