| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208838
Identifier: 126208838
GI number: 126208838
Start: 1576322
End: 1577155
Strand: Direct
Name: 126208838
Synonym: APL_1374
Alternate gene names: NA
Gene position: 1576322-1577155 (Clockwise)
Preceding gene: 126208829
Following gene: 126208839
Centisome position: 69.3
GC content: 39.81
Gene sequence:
>834_bases ATGCAAAAAGAACATTTTATTGGTTTAGGTGTTGCTGGCAATTTTGCCGGTCATTTAGAGCAAGCGGGTGAAGCGGCGGA TTTCTTACAGGTAAAAACAGAAGAAGCGATTCAGCCAAAAGCGATTTTTCCTTTCTACGTGCCAAGCCAAACCTTAACCC CAACGGAACAATTCCTTGCAACTTATCCCCTATCCCACGATACCATTACCTTTCCAAATGATGCTGACAATCTACAAATT GAACCGGAAGTTGCATTGATTTGCGAAATTGAATATCGAAACAATCAAGTCATTGCCCTTAAACCTACTCATTTTGCCGC TTATAACGACTGCTCTATTCGCCGTCCGAATGCACGTAAAATTTGTGAAAAGAAAAACTGGGGCAATGCGTCAAAAGGGA TCTCTGAAACATTGATTCCTTTAGATCATTTCACACAAGGCAGTATTTTGGATAATTACAATATTGCTTGTTTCCATAAA CGTGACGGTAAACTGAACGTATATGGCGAAGATAGCCCGGCGGTAAGCTATAGTTACTTTCATCAAAAACTGTTGAACTG GATTGTAGATAAGATGAATAACCAACCGGATCAAGGGCCGATGAACCATATTGCCGAATTACTTAAACAAGCGGATTACC CGACAAAAGCAGTAATCAGCATCGGTGCTACTCGCTATACTGAATTTGGCGAGCAAAACTTCTTACAAATTGGTGATACA AGTATTGTGGTGGTTTACAATGCTAAAAAGTATTCATTCGAACAAATTATGGAAATGGCTGAAACCGAAATATTTGCCGA AGACATTTCCGCCTTAATTCAACACGTCTGTTAA
Upstream 100 bases:
>100_bases TTAGCTAAAATAATTCTAGCTTACTTCGCATAAAATTCCCTTTCTTTTTCTTCTATTAATCGCTACATTTGTAGTACTTA ATCATATAGAGGTAGATATT
Downstream 100 bases:
>100_bases TAGATACAAGCGGTCATATTTGGAGTGAAATTTGCAAAAAAATTGTTAAATTTGACTATTTATTTTTCATCATGAGATAA AAAATGTGAGCCGCTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MQKEHFIGLGVAGNFAGHLEQAGEAADFLQVKTEEAIQPKAIFPFYVPSQTLTPTEQFLATYPLSHDTITFPNDADNLQI EPEVALICEIEYRNNQVIALKPTHFAAYNDCSIRRPNARKICEKKNWGNASKGISETLIPLDHFTQGSILDNYNIACFHK RDGKLNVYGEDSPAVSYSYFHQKLLNWIVDKMNNQPDQGPMNHIAELLKQADYPTKAVISIGATRYTEFGEQNFLQIGDT SIVVVYNAKKYSFEQIMEMAETEIFAEDISALIQHVC
Sequences:
>Translated_277_residues MQKEHFIGLGVAGNFAGHLEQAGEAADFLQVKTEEAIQPKAIFPFYVPSQTLTPTEQFLATYPLSHDTITFPNDADNLQI EPEVALICEIEYRNNQVIALKPTHFAAYNDCSIRRPNARKICEKKNWGNASKGISETLIPLDHFTQGSILDNYNIACFHK RDGKLNVYGEDSPAVSYSYFHQKLLNWIVDKMNNQPDQGPMNHIAELLKQADYPTKAVISIGATRYTEFGEQNFLQIGDT SIVVVYNAKKYSFEQIMEMAETEIFAEDISALIQHVC >Mature_277_residues MQKEHFIGLGVAGNFAGHLEQAGEAADFLQVKTEEAIQPKAIFPFYVPSQTLTPTEQFLATYPLSHDTITFPNDADNLQI EPEVALICEIEYRNNQVIALKPTHFAAYNDCSIRRPNARKICEKKNWGNASKGISETLIPLDHFTQGSILDNYNIACFHK RDGKLNVYGEDSPAVSYSYFHQKLLNWIVDKMNNQPDQGPMNHIAELLKQADYPTKAVISIGATRYTEFGEQNFLQIGDT SIVVVYNAKKYSFEQIMEMAETEIFAEDISALIQHVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31244; Mature: 31244
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKEHFIGLGVAGNFAGHLEQAGEAADFLQVKTEEAIQPKAIFPFYVPSQTLTPTEQFLA CCCCEEEEEEECCCHHHHHHHHCCHHHHHHCCHHHCCCCCEEEEEECCCCCCCCHHHHHE TYPLSHDTITFPNDADNLQIEPEVALICEIEYRNNQVIALKPTHFAAYNDCSIRRPNARK ECCCCCCEEECCCCCCCEEECCCEEEEEEEEECCCEEEEEECCEEEEECCCCCCCCCHHH ICEKKNWGNASKGISETLIPLDHFTQGSILDNYNIACFHKRDGKLNVYGEDSPAVSYSYF HHHCCCCCCCCCCCHHHCCCHHCCCCCCEECCCCEEEEEECCCEEEEEECCCCCCHHHHH HQKLLNWIVDKMNNQPDQGPMNHIAELLKQADYPTKAVISIGATRYTEFGEQNFLQIGDT HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHEEEECCHHHHHCCCCCCEEECCC SIVVVYNAKKYSFEQIMEMAETEIFAEDISALIQHVC EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQKEHFIGLGVAGNFAGHLEQAGEAADFLQVKTEEAIQPKAIFPFYVPSQTLTPTEQFLA CCCCEEEEEEECCCHHHHHHHHCCHHHHHHCCHHHCCCCCEEEEEECCCCCCCCHHHHHE TYPLSHDTITFPNDADNLQIEPEVALICEIEYRNNQVIALKPTHFAAYNDCSIRRPNARK ECCCCCCEEECCCCCCCEEECCCEEEEEEEEECCCEEEEEECCEEEEECCCCCCCCCHHH ICEKKNWGNASKGISETLIPLDHFTQGSILDNYNIACFHKRDGKLNVYGEDSPAVSYSYF HHHCCCCCCCCCCCHHHCCCHHCCCCCCEECCCCEEEEEECCCEEEEEECCCCCCHHHHH HQKLLNWIVDKMNNQPDQGPMNHIAELLKQADYPTKAVISIGATRYTEFGEQNFLQIGDT HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHEEEECCHHHHHCCCCCCEEECCC SIVVVYNAKKYSFEQIMEMAETEIFAEDISALIQHVC EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA