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The map label for this gene is hly [H]

Identifier: 126208829

GI number: 126208829

Start: 1561484

End: 1562071

Strand: Direct

Name: hly [H]

Synonym: APL_1365

Alternate gene names: 126208829

Gene position: 1561484-1562071 (Clockwise)

Preceding gene: 126208828

Following gene: 126208838

Centisome position: 68.65

GC content: 43.54

Gene sequence:

>588_bases
ATGCTTACGTTAAAAAAAATCGGTTTAACCAGTTTATTTGCCGTCAGTCTTCTATCTCTGCAAGGATGTATCGCTACTGC
GGTTGTCACTTCCGCTGCGGTTGCCGGCAAAGTAGCGATGGATCCTCGTAGCGCGGGTACTCAAGTTGATGATGAAGTGC
TTGAAGAGCGTGTGGCGTATAACTTAAGCAAAGATGCTCAGCTTAAAGAAGAAGCCCGTATCAATGTGGTGGCTTACAAC
GGCAAAGTATTATTAATCGGTCAAGCGCCTACTATGTCAGCTTCGGAAAGTGCTAAAAATCTTGCAGCCGGTGCGGAGGG
TGTGACAGAAATTTATAATGAAATTCGCACAGGTGAAAAAATCGGTGTCGGACAAATCTCTATTGACAGTTGGATTACTA
CTGCGATTAAATCAAAACTGTTAGCCAACTCGGAAGTAAAAGCCACAGAAGTTAAAGTCATTACCGAAAACGGTGAAGTC
TTCTTAATCGGAAAACTCTCACCGGCACAAGCGGATGCCGCAGCCGAAGTAGCTCGTAATGTGCGCGGGGTAAATAAAGT
AATTAAAGTGATTAATTACGTACAATAA

Upstream 100 bases:

>100_bases
CGAACTGAGAGTGATTGAAGGTCATCAATTTTGTGTAAACGTGCTATGCGAATTAGTTGATCACTTACTTTTTTCTTAAC
TTTATAAAAAGGATATTGTT

Downstream 100 bases:

>100_bases
CCGATATGAAAAACCGCCTTTAACAAAAGGCGTTTTTTTTACAAAAAACAAATGAAATTCGACCGCTTACTATTCCTCAT
TTTGCATCGCAATAAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLTLKKIGLTSLFAVSLLSLQGCIATAVVTSAAVAGKVAMDPRSAGTQVDDEVLEERVAYNLSKDAQLKEEARINVVAYN
GKVLLIGQAPTMSASESAKNLAAGAEGVTEIYNEIRTGEKIGVGQISIDSWITTAIKSKLLANSEVKATEVKVITENGEV
FLIGKLSPAQADAAAEVARNVRGVNKVIKVINYVQ

Sequences:

>Translated_195_residues
MLTLKKIGLTSLFAVSLLSLQGCIATAVVTSAAVAGKVAMDPRSAGTQVDDEVLEERVAYNLSKDAQLKEEARINVVAYN
GKVLLIGQAPTMSASESAKNLAAGAEGVTEIYNEIRTGEKIGVGQISIDSWITTAIKSKLLANSEVKATEVKVITENGEV
FLIGKLSPAQADAAAEVARNVRGVNKVIKVINYVQ
>Mature_195_residues
MLTLKKIGLTSLFAVSLLSLQGCIATAVVTSAAVAGKVAMDPRSAGTQVDDEVLEERVAYNLSKDAQLKEEARINVVAYN
GKVLLIGQAPTMSASESAKNLAAGAEGVTEIYNEIRTGEKIGVGQISIDSWITTAIKSKLLANSEVKATEVKVITENGEV
FLIGKLSPAQADAAAEVARNVRGVNKVIKVINYVQ

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=181, Percent_Identity=54.6961325966851, Blast_Score=184, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 20516; Mature: 20516

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLKKIGLTSLFAVSLLSLQGCIATAVVTSAAVAGKVAMDPRSAGTQVDDEVLEERVAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHH
NLSKDAQLKEEARINVVAYNGKVLLIGQAPTMSASESAKNLAAGAEGVTEIYNEIRTGEK
CCCCCCCHHHCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
IGVGQISIDSWITTAIKSKLLANSEVKATEVKVITENGEVFLIGKLSPAQADAAAEVARN
CCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHH
VRGVNKVIKVINYVQ
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTLKKIGLTSLFAVSLLSLQGCIATAVVTSAAVAGKVAMDPRSAGTQVDDEVLEERVAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHH
NLSKDAQLKEEARINVVAYNGKVLLIGQAPTMSASESAKNLAAGAEGVTEIYNEIRTGEK
CCCCCCCHHHCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
IGVGQISIDSWITTAIKSKLLANSEVKATEVKVITENGEVFLIGKLSPAQADAAAEVARN
CCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHH
VRGVNKVIKVINYVQ
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8461417 [H]