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The map label for this gene is yfcH [C]

Identifier: 126208760

GI number: 126208760

Start: 1483595

End: 1484482

Strand: Reverse

Name: yfcH [C]

Synonym: APL_1294

Alternate gene names: 126208760

Gene position: 1484482-1483595 (Counterclockwise)

Preceding gene: 126208761

Following gene: 126208758

Centisome position: 65.27

GC content: 42.57

Gene sequence:

>888_bases
ATGAACATTTTTCTTACCGGCGGTACCGGCTTTATCGGACAGGCTTTAGTGAAAGCATTAGTTGCGGAAGGGCATAATTT
GACGATTTTAACTCGTCAAGCGATGCCCGCAACATTGCCGCAAGCGGTCGAATTTTGCCGAGATTTAACAAGTTTTAAAG
ATTTTAATCAATTTGATGCGGTGATCAACCTTGCCGGCGAGCCTATTTTTAATAAGGCTTGGACAGCCGAGCAGAAAAAG
GTTTTAGTTGATAGCAGGGTAAATATTACCGCCGAATTAGTGCGCTTAATAAAAGCGAGTTCGAATCCTCCTCATACCTT
TATTTCCGGATCGGCAAGCGGATTTTACGGTGATTTAGCCGTATCGGATAATTTTTATACCGAATCGGCAAGCAGCGGTA
CAAACTTTACGGCACAAATTTGCCGACAATGGGAAGAAGCGGCGTTGGAAGCGAATGGTGTGACGAGAGTTTGCTTGATT
CGAACCGGAATAGTGCTGGCTAAGCACGGCGGTGCTTTAGCAAAGATGTTACCGCTATATCGTCTTAATTTAGCCGGTAG
ATTAGGTTCCGGTAAGCAATATTGGGCGTGGATTAGTTTGGAAGATCATATACAAGCGGTGTTATTTCTGCTGAAAAATA
CAAAATGTCGAGGAGCTTTTAATCTTGTTGCACCGCAACCGGTTACGAATACCGAATTTAATCGCCGTTTAGCAGACGCT
TTAAGAAAATATGCGATTTTCCCCGTACCGGGCTTCATCTTAAAACTGGTATTGGGAGAACGCGCGCAATTATTATTGGA
TAATCAACCGCTTATTCCCCAAAAGTTACGGCAAGAAGGTTTTAAATTTAAATACGAAACGCTAGATTTTGTGCAAGTGC
TTAAATAA

Upstream 100 bases:

>100_bases
CGATTGCCGGTGACGATACGATTTTTATCACACCGACTAAGGTTACTCCGGTGGAAGTTCTGATGCAGAATGTCACCGAA
TTATTCGAGTCTTCTTTCTA

Downstream 100 bases:

>100_bases
AAAATCCCACCAACGGTGGGATTTTTTATGCTTCGTTTTTATTGAAGAATTAAGTAAAAGTTTGCGCCGTTACGTAAAAT
ATTAAGGGCAACGACAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNIFLTGGTGFIGQALVKALVAEGHNLTILTRQAMPATLPQAVEFCRDLTSFKDFNQFDAVINLAGEPIFNKAWTAEQKK
VLVDSRVNITAELVRLIKASSNPPHTFISGSASGFYGDLAVSDNFYTESASSGTNFTAQICRQWEEAALEANGVTRVCLI
RTGIVLAKHGGALAKMLPLYRLNLAGRLGSGKQYWAWISLEDHIQAVLFLLKNTKCRGAFNLVAPQPVTNTEFNRRLADA
LRKYAIFPVPGFILKLVLGERAQLLLDNQPLIPQKLRQEGFKFKYETLDFVQVLK

Sequences:

>Translated_295_residues
MNIFLTGGTGFIGQALVKALVAEGHNLTILTRQAMPATLPQAVEFCRDLTSFKDFNQFDAVINLAGEPIFNKAWTAEQKK
VLVDSRVNITAELVRLIKASSNPPHTFISGSASGFYGDLAVSDNFYTESASSGTNFTAQICRQWEEAALEANGVTRVCLI
RTGIVLAKHGGALAKMLPLYRLNLAGRLGSGKQYWAWISLEDHIQAVLFLLKNTKCRGAFNLVAPQPVTNTEFNRRLADA
LRKYAIFPVPGFILKLVLGERAQLLLDNQPLIPQKLRQEGFKFKYETLDFVQVLK
>Mature_295_residues
MNIFLTGGTGFIGQALVKALVAEGHNLTILTRQAMPATLPQAVEFCRDLTSFKDFNQFDAVINLAGEPIFNKAWTAEQKK
VLVDSRVNITAELVRLIKASSNPPHTFISGSASGFYGDLAVSDNFYTESASSGTNFTAQICRQWEEAALEANGVTRVCLI
RTGIVLAKHGGALAKMLPLYRLNLAGRLGSGKQYWAWISLEDHIQAVLFLLKNTKCRGAFNLVAPQPVTNTEFNRRLADA
LRKYAIFPVPGFILKLVLGERAQLLLDNQPLIPQKLRQEGFKFKYETLDFVQVLK

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=291, Percent_Identity=31.9587628865979, Blast_Score=164, Evalue=8e-41,
Organism=Escherichia coli, GI1788642, Length=292, Percent_Identity=46.9178082191781, Blast_Score=261, Evalue=4e-71,
Organism=Drosophila melanogaster, GI28573846, Length=292, Percent_Identity=29.1095890410959, Blast_Score=127, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32634; Mature: 32634

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFLTGGTGFIGQALVKALVAEGHNLTILTRQAMPATLPQAVEFCRDLTSFKDFNQFDA
CEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VINLAGEPIFNKAWTAEQKKVLVDSRVNITAELVRLIKASSNPPHTFISGSASGFYGDLA
HHHHCCCCCCCCCCCCHHHHEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEE
VSDNFYTESASSGTNFTAQICRQWEEAALEANGVTRVCLIRTGIVLAKHGGALAKMLPLY
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHCEEEEECCCHHHHHHHHH
RLNLAGRLGSGKQYWAWISLEDHIQAVLFLLKNTKCRGAFNLVAPQPVTNTEFNRRLADA
HHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHH
LRKYAIFPVPGFILKLVLGERAQLLLDNQPLIPQKLRQEGFKFKYETLDFVQVLK
HHHHCCCCCHHHHHHHHHCCCHHEEECCCCCCHHHHHHCCCEEEHHHHHHHHHCC
>Mature Secondary Structure
MNIFLTGGTGFIGQALVKALVAEGHNLTILTRQAMPATLPQAVEFCRDLTSFKDFNQFDA
CEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VINLAGEPIFNKAWTAEQKKVLVDSRVNITAELVRLIKASSNPPHTFISGSASGFYGDLA
HHHHCCCCCCCCCCCCHHHHEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEE
VSDNFYTESASSGTNFTAQICRQWEEAALEANGVTRVCLIRTGIVLAKHGGALAKMLPLY
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHCEEEEECCCHHHHHHHHH
RLNLAGRLGSGKQYWAWISLEDHIQAVLFLLKNTKCRGAFNLVAPQPVTNTEFNRRLADA
HHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHH
LRKYAIFPVPGFILKLVLGERAQLLLDNQPLIPQKLRQEGFKFKYETLDFVQVLK
HHHHCCCCCHHHHHHHHHCCCHHEEECCCCCCHHHHHHCCCEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]