| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is fldA [H]
Identifier: 126208687
GI number: 126208687
Start: 1403106
End: 1403630
Strand: Reverse
Name: fldA [H]
Synonym: APL_1219
Alternate gene names: 126208687
Gene position: 1403630-1403106 (Counterclockwise)
Preceding gene: 126208688
Following gene: 126208686
Centisome position: 61.71
GC content: 41.14
Gene sequence:
>525_bases ATGGCAGTAGTAGGTTTATTCTACGGTAGCGATACTGGTAATACAGAAAACATTGCAAAAATGATTCAAAAAGAAATCGG TGCGAATTTAATCGATGTACGCGATATCGCAAAAAGTGCTAAAGAAGATATTGAAGCGTACGATTTTTTACTTTTAGGTA TTCCGACATGGTATTACGGCGAATCTCAAGCGGATTGGGATGATTTTATGCCGACGCTAAAAGAAATCGATTTTAGCGGT AAAGTCATCGGTATCTTCGGTTGCGGTGACCAAGAAGATTATGCGGAATATTTCTGTGATGCGATGGGAACCATTCGCGA TGTCGTTGAGCAAAACGGCGGTGTGATTGTCGGACATTGGCCGACGGAAGGTTATAGCTTTGAAGTATCGCAAGCGTTAG TGGACGAAAATACATTTGTCGGTTTATGTATTGATGAAGATCGCCAACCGGAATTAACCGGTGAACGTGTAAACCGTTGG TGTAAACAGATCTTTGATGAGATGTGCTTAGATCAGTTAGCATAA
Upstream 100 bases:
>100_bases GTCGCAACGCGGAGTAACACGCGGACAGTTAATCGAAATTATTTTAAATGACTATATTCATAGTCATCAGACTGATTAGA GAGAAAATAGGTAAATTCAA
Downstream 100 bases:
>100_bases TGAATATAAGAGAGAAGGGTAACAAGTTATGTCTGAAGAAAATGCAAAACTTCTTAAAAGTGTAGGTTTGAAAGTTACTG AGCCTCGTTTGACCATCCTT
Product: flavodoxin FldA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MAVVGLFYGSDTGNTENIAKMIQKEIGANLIDVRDIAKSAKEDIEAYDFLLLGIPTWYYGESQADWDDFMPTLKEIDFSG KVIGIFGCGDQEDYAEYFCDAMGTIRDVVEQNGGVIVGHWPTEGYSFEVSQALVDENTFVGLCIDEDRQPELTGERVNRW CKQIFDEMCLDQLA
Sequences:
>Translated_174_residues MAVVGLFYGSDTGNTENIAKMIQKEIGANLIDVRDIAKSAKEDIEAYDFLLLGIPTWYYGESQADWDDFMPTLKEIDFSG KVIGIFGCGDQEDYAEYFCDAMGTIRDVVEQNGGVIVGHWPTEGYSFEVSQALVDENTFVGLCIDEDRQPELTGERVNRW CKQIFDEMCLDQLA >Mature_173_residues AVVGLFYGSDTGNTENIAKMIQKEIGANLIDVRDIAKSAKEDIEAYDFLLLGIPTWYYGESQADWDDFMPTLKEIDFSGK VIGIFGCGDQEDYAEYFCDAMGTIRDVVEQNGGVIVGHWPTEGYSFEVSQALVDENTFVGLCIDEDRQPELTGERVNRWC KQIFDEMCLDQLA
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=173, Percent_Identity=71.0982658959538, Blast_Score=276, Evalue=7e-76, Organism=Escherichia coli, GI1789262, Length=167, Percent_Identity=41.9161676646707, Blast_Score=147, Evalue=3e-37,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 19554; Mature: 19423
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVGLFYGSDTGNTENIAKMIQKEIGANLIDVRDIAKSAKEDIEAYDFLLLGIPTWYYG CEEEEEEECCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHEECCCCEECC ESQADWDDFMPTLKEIDFSGKVIGIFGCGDQEDYAEYFCDAMGTIRDVVEQNGGVIVGHW CCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC PTEGYSFEVSQALVDENTFVGLCIDEDRQPELTGERVNRWCKQIFDEMCLDQLA CCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVVGLFYGSDTGNTENIAKMIQKEIGANLIDVRDIAKSAKEDIEAYDFLLLGIPTWYYG EEEEEEECCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHEECCCCEECC ESQADWDDFMPTLKEIDFSGKVIGIFGCGDQEDYAEYFCDAMGTIRDVVEQNGGVIVGHW CCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC PTEGYSFEVSQALVDENTFVGLCIDEDRQPELTGERVNRWCKQIFDEMCLDQLA CCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]