| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208669
Identifier: 126208669
GI number: 126208669
Start: 1383014
End: 1384675
Strand: Reverse
Name: 126208669
Synonym: APL_1201
Alternate gene names: NA
Gene position: 1384675-1383014 (Counterclockwise)
Preceding gene: 126208670
Following gene: 126208668
Centisome position: 60.88
GC content: 33.87
Gene sequence:
>1662_bases ATGTCAGGAAAACAATTAAAAATGACTTTTCAGCCGACTGTGATCGAACATCTCGGAGTAAAAATGTATTCACATACCGT TCCTGCAATCGCTGAATTGATAGCTAATGCTTATGATGCGGGAGCTAAAGTAGCGGAAGTATTACTTTATGATAAACATG AACACAAAATCATTATTCGGGATGATGGGATCGGAATGACTTTCGATGAAATAAACGAGTTTTATCTGAGAATAGGAAGA AATCGGAGAGAAGAAAATCAAATCTCCTGTCCGAATAGAAAAGCTACGGGGAAAAAAGGATTAGGAAAATTAGCATTATT TGGTTTAGGAAATAAAATTGAAATTTCTACCGTTAGAAATGGGGAACAAGTTACATTCATTTTAAATTACGAAGATATCA AAAAAAGTAAGGGGGATTATGAACCAGAATTTAATATTCAAGAGGCTGATTTTTCCGTTCCAAGCGGTACTACGATTACT TTGACTGAATTAACGAAAAAGCAAGGTTATCCGTTGAATAATTATGTAGAGCACCTTGCACGTTTGTTTGATTTTCCAGA TCCGAGCTTCATCATTAAAATGAGTTTAAATGATGAAGAGCCTAGAATTATTGACAGCAAGTTAAAATATAGCTTCGTAA CTTCTCAATTTGAATGGGATTATGCGGCATTTATCCAAACGGACAGTTTAACGGAAAAAGCGGAAAAATATTCTAATAGC GGGTTAATTAGCGGGAAATTTATTACAACAGAAAAACCGTTAAAAAATGGTTTAAAAGGGATTACGCTTTTTGCCAACGG ACGAATGGTTAATGAACCAGAATTTTTCAGAAGTAGTGAATCCAGCCACTTTTATTCATATTTGACGGGGTGGCTGAATG TCGATTTCATTGACGATGATAATGAAGATCTTATTTCTACGGATAGAAGGTCGTTAGATTGGAAACAACCTATTACGACG ATGTTGCAAAATTTCTTAGGTGAAGTTATTACGGCTCTTGAAAGAGATTGGAGAAAAAAACGGAAAGAAACGAAAGAAAG AAAAATCAAGGATAATACAACAATTGATCTTTCATCATGGAAAGATAAATTACCCCCTGAAATAAAACAACCCATAACAG AAATTTTAGAACATGTTATCGAAAATTCAGAACTCGCAATAGCTCAACAAGAAGAAATTGTTGAAGCTTTACACGGATTA ATCCCAGAATACCCGTATTATCATTGGAGAGGACTCCATTCTCAGATTCAAGACGCATCAAGAAAATATTATGAACAAGA GGATTATTATCAAGCATTTTCAGAAAGTATAAAAAGATATATCGCAAATACTCGTGAGAAATCAAAAAGTACTCAATCTT CAGAACAAGGATTGATGGGAGAAGCTTTTGGGGCAAGAAAAGAAAATAGAATATTAACAGTTACTAAAAAACATGCTTTG AAACCTAATGGTCGTCCATTTACGGAAAACACGTTAGCATCTATAGAAGACGGTCAGAAATTTCTTTCTATGGGAATTGT TTCAGGCTATAGAAATCCTATTGCCCATGAAGAAATTAAAGATTTAAAGAGTTCTAATTTATTTACTGAAAAAGATTGCT TAGATGCATTAGGATTACTTTCTCATTTGCAAAGAAGATTGGATGATTCAGAATTAGAGTAA
Upstream 100 bases:
>100_bases GGCTATAGCGCGATTAATCGGTAATGCCGTTCCGCCTAAATATGCCGAACAAATCGGTAAAGCGATAATTAGTAACTTGA AATAATATATGGAGATTAAA
Downstream 100 bases:
>100_bases TTTTTAATGACCGATATTTTCTCTCCTCAAAAACGTTCTGAAATAATGTCTAGGGTTAAAAGTAAAAATACTAAACCCGA GATAATTGTTAGAACGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF68 [H]
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MSGKQLKMTFQPTVIEHLGVKMYSHTVPAIAELIANAYDAGAKVAEVLLYDKHEHKIIIRDDGIGMTFDEINEFYLRIGR NRREENQISCPNRKATGKKGLGKLALFGLGNKIEISTVRNGEQVTFILNYEDIKKSKGDYEPEFNIQEADFSVPSGTTIT LTELTKKQGYPLNNYVEHLARLFDFPDPSFIIKMSLNDEEPRIIDSKLKYSFVTSQFEWDYAAFIQTDSLTEKAEKYSNS GLISGKFITTEKPLKNGLKGITLFANGRMVNEPEFFRSSESSHFYSYLTGWLNVDFIDDDNEDLISTDRRSLDWKQPITT MLQNFLGEVITALERDWRKKRKETKERKIKDNTTIDLSSWKDKLPPEIKQPITEILEHVIENSELAIAQQEEIVEALHGL IPEYPYYHWRGLHSQIQDASRKYYEQEDYYQAFSESIKRYIANTREKSKSTQSSEQGLMGEAFGARKENRILTVTKKHAL KPNGRPFTENTLASIEDGQKFLSMGIVSGYRNPIAHEEIKDLKSSNLFTEKDCLDALGLLSHLQRRLDDSELE
Sequences:
>Translated_553_residues MSGKQLKMTFQPTVIEHLGVKMYSHTVPAIAELIANAYDAGAKVAEVLLYDKHEHKIIIRDDGIGMTFDEINEFYLRIGR NRREENQISCPNRKATGKKGLGKLALFGLGNKIEISTVRNGEQVTFILNYEDIKKSKGDYEPEFNIQEADFSVPSGTTIT LTELTKKQGYPLNNYVEHLARLFDFPDPSFIIKMSLNDEEPRIIDSKLKYSFVTSQFEWDYAAFIQTDSLTEKAEKYSNS GLISGKFITTEKPLKNGLKGITLFANGRMVNEPEFFRSSESSHFYSYLTGWLNVDFIDDDNEDLISTDRRSLDWKQPITT MLQNFLGEVITALERDWRKKRKETKERKIKDNTTIDLSSWKDKLPPEIKQPITEILEHVIENSELAIAQQEEIVEALHGL IPEYPYYHWRGLHSQIQDASRKYYEQEDYYQAFSESIKRYIANTREKSKSTQSSEQGLMGEAFGARKENRILTVTKKHAL KPNGRPFTENTLASIEDGQKFLSMGIVSGYRNPIAHEEIKDLKSSNLFTEKDCLDALGLLSHLQRRLDDSELE >Mature_552_residues SGKQLKMTFQPTVIEHLGVKMYSHTVPAIAELIANAYDAGAKVAEVLLYDKHEHKIIIRDDGIGMTFDEINEFYLRIGRN RREENQISCPNRKATGKKGLGKLALFGLGNKIEISTVRNGEQVTFILNYEDIKKSKGDYEPEFNIQEADFSVPSGTTITL TELTKKQGYPLNNYVEHLARLFDFPDPSFIIKMSLNDEEPRIIDSKLKYSFVTSQFEWDYAAFIQTDSLTEKAEKYSNSG LISGKFITTEKPLKNGLKGITLFANGRMVNEPEFFRSSESSHFYSYLTGWLNVDFIDDDNEDLISTDRRSLDWKQPITTM LQNFLGEVITALERDWRKKRKETKERKIKDNTTIDLSSWKDKLPPEIKQPITEILEHVIENSELAIAQQEEIVEALHGLI PEYPYYHWRGLHSQIQDASRKYYEQEDYYQAFSESIKRYIANTREKSKSTQSSEQGLMGEAFGARKENRILTVTKKHALK PNGRPFTENTLASIEDGQKFLSMGIVSGYRNPIAHEEIKDLKSSNLFTEKDCLDALGLLSHLQRRLDDSELE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 [H]
Pfam domain/function: PF02518 HATPase_c [H]
EC number: NA
Molecular weight: Translated: 63543; Mature: 63412
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKQLKMTFQPTVIEHLGVKMYSHTVPAIAELIANAYDAGAKVAEVLLYDKHEHKIIIR CCCCEEEEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEE DDGIGMTFDEINEFYLRIGRNRREENQISCPNRKATGKKGLGKLALFGLGNKIEISTVRN ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECC GEQVTFILNYEDIKKSKGDYEPEFNIQEADFSVPSGTTITLTELTKKQGYPLNNYVEHLA CCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHH RLFDFPDPSFIIKMSLNDEEPRIIDSKLKYSFVTSQFEWDYAAFIQTDSLTEKAEKYSNS HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCC GLISGKFITTEKPLKNGLKGITLFANGRMVNEPEFFRSSESSHFYSYLTGWLNVDFIDDD CCEECEEECCCHHHHCCCCEEEEEECCEECCCCHHHHCCCCCHHHHHHHHHEEEEEECCC NEDLISTDRRSLDWKQPITTMLQNFLGEVITALERDWRKKRKETKERKIKDNTTIDLSSW CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCH KDKLPPEIKQPITEILEHVIENSELAIAQQEEIVEALHGLIPEYPYYHWRGLHSQIQDAS HCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RKYYEQEDYYQAFSESIKRYIANTREKSKSTQSSEQGLMGEAFGARKENRILTVTKKHAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHCCCCCCCEEEEEHHHCC KPNGRPFTENTLASIEDGQKFLSMGIVSGYRNPIAHEEIKDLKSSNLFTEKDCLDALGLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH SHLQRRLDDSELE HHHHHHCCCCCCC >Mature Secondary Structure SGKQLKMTFQPTVIEHLGVKMYSHTVPAIAELIANAYDAGAKVAEVLLYDKHEHKIIIR CCCEEEEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEE DDGIGMTFDEINEFYLRIGRNRREENQISCPNRKATGKKGLGKLALFGLGNKIEISTVRN ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECC GEQVTFILNYEDIKKSKGDYEPEFNIQEADFSVPSGTTITLTELTKKQGYPLNNYVEHLA CCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHH RLFDFPDPSFIIKMSLNDEEPRIIDSKLKYSFVTSQFEWDYAAFIQTDSLTEKAEKYSNS HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCC GLISGKFITTEKPLKNGLKGITLFANGRMVNEPEFFRSSESSHFYSYLTGWLNVDFIDDD CCEECEEECCCHHHHCCCCEEEEEECCEECCCCHHHHCCCCCHHHHHHHHHEEEEEECCC NEDLISTDRRSLDWKQPITTMLQNFLGEVITALERDWRKKRKETKERKIKDNTTIDLSSW CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCH KDKLPPEIKQPITEILEHVIENSELAIAQQEEIVEALHGLIPEYPYYHWRGLHSQIQDAS HCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RKYYEQEDYYQAFSESIKRYIANTREKSKSTQSSEQGLMGEAFGARKENRILTVTKKHAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHCCCCCCCEEEEEHHHCC KPNGRPFTENTLASIEDGQKFLSMGIVSGYRNPIAHEEIKDLKSSNLFTEKDCLDALGLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH SHLQRRLDDSELE HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1937045 [H]