| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208622
Identifier: 126208622
GI number: 126208622
Start: 1327802
End: 1328326
Strand: Direct
Name: 126208622
Synonym: APL_1152
Alternate gene names: NA
Gene position: 1327802-1328326 (Clockwise)
Preceding gene: 126208621
Following gene: 126208623
Centisome position: 58.38
GC content: 39.81
Gene sequence:
>525_bases ATGAAAGGAATTAAACTTATCTCTTCATTATCTTTCGCCGCACTTTTAGCCGCTTGTTCAACCGCTAATGATGTAGCTTC AACGGTCGGCGAAGGCGTATCAAATGCCGCTTCGGCTACAGCAAACGCGGTAAAAGACGGTGCTTCCGCCGTATCTAACG GCGTTTCAAATACGGTGAATACGGTAAAAAATAAATTAACTGCCTCATCTAAAACGGTTGTTTACCAATGCCAAAACAGT AAAACCGTGGTTGCCACCTATGATTTTGAGGGCGAGAAAGCAACCGGTTTAACTTTAACCGTGAACGATGTAGCGGTAAA AGAGTTAATGCGTGACGAGAAAAATAAAGATTTCGCTTCATTTGCATCGAAAACGCACGTATGGAACTTAGATGAAACTT TCTCACTTTCAACTTTTAACAAAACCGAAGCGGGAATGTTATTCAAAAAAGGTAAAAATGCGGATGAAATCCTTGCAAAA AACTGCGAAGTTAATCAAACTGCAACCGCAAAATTAAATAAATAA
Upstream 100 bases:
>100_bases TATTTTTTAGTAACTTATTGAACTAATGTTGGCTTTTGTTTCTCTAATGAAAGCGTTGAAAAACGTGTGTGTTTGCTTTT TTAATTGTAAGGAATAAAAA
Downstream 100 bases:
>100_bases CAGATTGATTCGTTTAGATAAGCGGGCGGATTTGTAAAATTTTTTGCAAATCCGCCCGCTTGTTTTCATTCATTGGACAA GCTATGCCGATTATTTTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKGIKLISSLSFAALLAACSTANDVASTVGEGVSNAASATANAVKDGASAVSNGVSNTVNTVKNKLTASSKTVVYQCQNS KTVVATYDFEGEKATGLTLTVNDVAVKELMRDEKNKDFASFASKTHVWNLDETFSLSTFNKTEAGMLFKKGKNADEILAK NCEVNQTATAKLNK
Sequences:
>Translated_174_residues MKGIKLISSLSFAALLAACSTANDVASTVGEGVSNAASATANAVKDGASAVSNGVSNTVNTVKNKLTASSKTVVYQCQNS KTVVATYDFEGEKATGLTLTVNDVAVKELMRDEKNKDFASFASKTHVWNLDETFSLSTFNKTEAGMLFKKGKNADEILAK NCEVNQTATAKLNK >Mature_174_residues MKGIKLISSLSFAALLAACSTANDVASTVGEGVSNAASATANAVKDGASAVSNGVSNTVNTVKNKLTASSKTVVYQCQNS KTVVATYDFEGEKATGLTLTVNDVAVKELMRDEKNKDFASFASKTHVWNLDETFSLSTFNKTEAGMLFKKGKNADEILAK NCEVNQTATAKLNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016777 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18301; Mature: 18301
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIKLISSLSFAALLAACSTANDVASTVGEGVSNAASATANAVKDGASAVSNGVSNTVN CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVKNKLTASSKTVVYQCQNSKTVVATYDFEGEKATGLTLTVNDVAVKELMRDEKNKDFAS HHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHH FASKTHVWNLDETFSLSTFNKTEAGMLFKKGKNADEILAKNCEVNQTATAKLNK HHCCCEEECCCCCEEECCCCCCCCCHHEECCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKGIKLISSLSFAALLAACSTANDVASTVGEGVSNAASATANAVKDGASAVSNGVSNTVN CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVKNKLTASSKTVVYQCQNSKTVVATYDFEGEKATGLTLTVNDVAVKELMRDEKNKDFAS HHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHH FASKTHVWNLDETFSLSTFNKTEAGMLFKKGKNADEILAKNCEVNQTATAKLNK HHCCCEEECCCCCEEECCCCCCCCCHHEECCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]