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The map label for this gene is yebC [C]

Identifier: 126208621

GI number: 126208621

Start: 1326928

End: 1327668

Strand: Direct

Name: yebC [C]

Synonym: APL_1151

Alternate gene names: 126208621

Gene position: 1326928-1327668 (Clockwise)

Preceding gene: 126208620

Following gene: 126208622

Centisome position: 58.34

GC content: 46.02

Gene sequence:

>741_bases
ATGGCAGGTCATAGTAAGTGGGCTAACATTAAACACCGTAAAGCGGCACAAGATGCACAACGCGGTAAAATTTTTACTAA
ATTAATTCGTGAATTAGTTACTGCGGCAAAAATTGGCGGCGGCGACGTTTCTGCGAACCCTCGTTTACGTTCTGCAGTAG
ATAAAGCGTTATCAAACAATATGACACGTGATACGATCAACCGTGCGATCGAGCGTGGCGTAGGCGGCGGCGATGACACC
AATATGGAAACGAAAATCTACGAAGGCTACGGTCCGGGCGGTACGGCGGTAATGGTTGAATGTTTAAGCGATAACGCGAA
CCGTACCATTTCACAAGTTCGTCCAAGTTTCACTAAATGCGGCGGTAACTTAGGTACCGAAGGTTCTGTCGGTTACTTAT
TCAGCAAAAAAGGCTTAATTTTAATTGCTTCAGGCGATGAAGACGCACTAACCGAAGCAGCGATTGAAGCGGGTGCAGAC
GATATTCAACCGCAAGAAGACGGTTCGTTTGAAATCTATACCGCTTGGGAAGATTTAGGTAGCGTACGTGACGGTATTGA
AGCGGCGGGCTTTAAAATCCAAGAAGCGGAAGTCACTATGATCCCATCAACTACGGTTGAACTTGATGCGGAAACCGCAC
CGAAATTACTTGATTTAATTAACCGCCTTGAAGATTGTGACGACGTACAAAACGTTTATCACAACGGCGAAATCAGCGAC
GAAGTTGCAGCCCTTCTCTAA

Upstream 100 bases:

>100_bases
CACCGAATAATGCGGCGGCGATTGCAAAATATTTAACTCCCCTCTTTAGAAAAGAGGGGAACTTTTTCAAAACATAAATT
TAAAAGAAGGAAACAACAGA

Downstream 100 bases:

>100_bases
TTTCTTGCCCTTAAGCCAACCTTTCGGTTGGCTTATTTTTTAGTAACTTATTGAACTAATGTTGGCTTTTGTTTCTCTAA
TGAAAGCGTTGAAAAACGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRSAVDKALSNNMTRDTINRAIERGVGGGDDT
NMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILIASGDEDALTEAAIEAGAD
DIQPQEDGSFEIYTAWEDLGSVRDGIEAAGFKIQEAEVTMIPSTTVELDAETAPKLLDLINRLEDCDDVQNVYHNGEISD
EVAALL

Sequences:

>Translated_246_residues
MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRSAVDKALSNNMTRDTINRAIERGVGGGDDT
NMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILIASGDEDALTEAAIEAGAD
DIQPQEDGSFEIYTAWEDLGSVRDGIEAAGFKIQEAEVTMIPSTTVELDAETAPKLLDLINRLEDCDDVQNVYHNGEISD
EVAALL
>Mature_245_residues
AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRSAVDKALSNNMTRDTINRAIERGVGGGDDTN
METKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILIASGDEDALTEAAIEAGADD
IQPQEDGSFEIYTAWEDLGSVRDGIEAAGFKIQEAEVTMIPSTTVELDAETAPKLLDLINRLEDCDDVQNVYHNGEISDE
VAALL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=248, Percent_Identity=31.0483870967742, Blast_Score=114, Evalue=8e-26,
Organism=Escherichia coli, GI1788171, Length=246, Percent_Identity=74.390243902439, Blast_Score=393, Evalue=1e-111,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=39.4849785407725, Blast_Score=159, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=24.6913580246914, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=33.7121212121212, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24583305, Length=251, Percent_Identity=29.8804780876494, Blast_Score=94, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26294; Mature: 26162

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRSAVDKALSNN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKC
CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHEEHHCCCHHHHHHHCHHHHHC
GGNLGTEGSVGYLFSKKGLILIASGDEDALTEAAIEAGADDIQPQEDGSFEIYTAWEDLG
CCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHH
SVRDGIEAAGFKIQEAEVTMIPSTTVELDAETAPKLLDLINRLEDCDDVQNVYHNGEISD
HHHHHHHHCCCEEECCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EVAALL
HHHHHC
>Mature Secondary Structure 
AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRSAVDKALSNN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKC
CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHEEHHCCCHHHHHHHCHHHHHC
GGNLGTEGSVGYLFSKKGLILIASGDEDALTEAAIEAGADDIQPQEDGSFEIYTAWEDLG
CCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHH
SVRDGIEAAGFKIQEAEVTMIPSTTVELDAETAPKLLDLINRLEDCDDVQNVYHNGEISD
HHHHHHHHCCCEEECCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EVAALL
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA