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The map label for this gene is yegQ [C]

Identifier: 126208600

GI number: 126208600

Start: 1306339

End: 1307736

Strand: Direct

Name: yegQ [C]

Synonym: APL_1130

Alternate gene names: 126208600

Gene position: 1306339-1307736 (Clockwise)

Preceding gene: 126208592

Following gene: 126208601

Centisome position: 57.43

GC content: 43.85

Gene sequence:

>1398_bases
ATGTCCGAATTAAAATACCCGAAACCCGAATTACTTTCACCAGCCGGTACCTTAAAAAATATGCGCTATGCATTCGCTTA
CGGTGCCGATGCCGTTTATGCCGGTCAGCCCCGTTATAGCTTACGTGTGCGTAACAATGAATTTAACCACGCCAATTTGC
AAATTGCGATTGATGAAGCGCATAGCTTAGGCAAGAAATTCTATGTGGTGGTGAATATCGCACCGCACAACTCAAAACTC
AAAACCTTTATCAAAGATCTAAAAGTTGTGGTGGATATGAAACCGGATGCGTTAATTATGTCCGATCCCGGTTTAATTAT
GTTAGTGCGTGAAAACTTCCCGGAAATCGATATTCACCTTTCAGTACAAGCGAATGCGGTAAACTGGGCGACGGTAAAAT
TCTGGAAACAGATGGGGCTTACCCGTGTCATTCTTTCACGTGAATTATCATTGGAAGAAATCGAAGAAATCCGCCAGCAA
GTGCCGGATATCGAGCTTGAAATTTTCGTACACGGCGCACTTTGTATGGCATATTCAGGTCGTTGCCTATTGTCCGGTTA
TATCAATAAACGTGACCCGAATCAAGGCACTTGCACTAACGCTTGCCGTTGGGAATACAAAATGGAAGAAGGTACAACCG
ATGAAGTCGGTAACATCGTGCCGCAATCTGCCGTTCAACGCTATGAACCGGAAATCGAAGTGAAAAATATTGCCCCGACA
TTAGGCGAAGGTTCACATACCGATAAAGTTTTCCTATATACCGAGCCAAACCGTCCGGACGAACAAATGACCGCATTTGA
AGATGAACACGGTACTTACTTTATGAACTCAAAAGACTTACGAGCCGTACAACACGTGGAAAGATTAACCCAAATGGGCG
TCCACTCACTTAAAATTGAAGGGCGTACTAAGTCGTTCTATTACTGTGCACGTACCGCTCAAGTTTATCGTAAAGCGATT
GATGATGCGGCGGCAGGTAAACCGTTTGACGAATCATTAATGGATACCTTGGAATCGCTTGCTCATCGCGGTTATACCGA
AGGCTTCTTACGTCGCCATACTCATGACGAATATCAAAACTACGAATACGGCTACTCGATTTCGGACCGCCAACAATTTG
TCGGCGAATTTACCGGTAAACGTAACGCCGAAGGTATGGCGGAAGTCGCGGTTAAAAATAAATTCCTCGTGGGGGATTCG
GTAGAAATGATGACCCCGAAAGGTAATATCGTGTTCAAAATCGAACGTATGTTAAACCGCAAAAATGAACAAGTGGAAGC
AGGACTTGGTGACGGACATTTTGTCTTTTTAGACGTACCAGCGGATATTGAGCTGGATTATGCACTATTAATGCGTAATC
TTGTAGATTCTAATACAAGAAATCCGCATAAAGCGTGA

Upstream 100 bases:

>100_bases
ATCTACATCTTGCTAGAAAGTAATATTTGCTAGAAAATAGACAACTTTATGCGCCCTACTTGTAGAGCGTACTGACTTGT
TATCAGAAGAGAATAGACCT

Downstream 100 bases:

>100_bases
TCCGCTTCACAAAATAAGCAATGTATGAAAAATGTTGCAAATTTGTTATTGAATTTAAACACAAGATACATATAATTTTG
CACAGTACTCATAGAAGTAT

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MSELKYPKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHANLQIAIDEAHSLGKKFYVVVNIAPHNSKL
KTFIKDLKVVVDMKPDALIMSDPGLIMLVRENFPEIDIHLSVQANAVNWATVKFWKQMGLTRVILSRELSLEEIEEIRQQ
VPDIELEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKMEEGTTDEVGNIVPQSAVQRYEPEIEVKNIAPT
LGEGSHTDKVFLYTEPNRPDEQMTAFEDEHGTYFMNSKDLRAVQHVERLTQMGVHSLKIEGRTKSFYYCARTAQVYRKAI
DDAAAGKPFDESLMDTLESLAHRGYTEGFLRRHTHDEYQNYEYGYSISDRQQFVGEFTGKRNAEGMAEVAVKNKFLVGDS
VEMMTPKGNIVFKIERMLNRKNEQVEAGLGDGHFVFLDVPADIELDYALLMRNLVDSNTRNPHKA

Sequences:

>Translated_465_residues
MSELKYPKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHANLQIAIDEAHSLGKKFYVVVNIAPHNSKL
KTFIKDLKVVVDMKPDALIMSDPGLIMLVRENFPEIDIHLSVQANAVNWATVKFWKQMGLTRVILSRELSLEEIEEIRQQ
VPDIELEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKMEEGTTDEVGNIVPQSAVQRYEPEIEVKNIAPT
LGEGSHTDKVFLYTEPNRPDEQMTAFEDEHGTYFMNSKDLRAVQHVERLTQMGVHSLKIEGRTKSFYYCARTAQVYRKAI
DDAAAGKPFDESLMDTLESLAHRGYTEGFLRRHTHDEYQNYEYGYSISDRQQFVGEFTGKRNAEGMAEVAVKNKFLVGDS
VEMMTPKGNIVFKIERMLNRKNEQVEAGLGDGHFVFLDVPADIELDYALLMRNLVDSNTRNPHKA
>Mature_464_residues
SELKYPKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHANLQIAIDEAHSLGKKFYVVVNIAPHNSKLK
TFIKDLKVVVDMKPDALIMSDPGLIMLVRENFPEIDIHLSVQANAVNWATVKFWKQMGLTRVILSRELSLEEIEEIRQQV
PDIELEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKMEEGTTDEVGNIVPQSAVQRYEPEIEVKNIAPTL
GEGSHTDKVFLYTEPNRPDEQMTAFEDEHGTYFMNSKDLRAVQHVERLTQMGVHSLKIEGRTKSFYYCARTAQVYRKAID
DAAAGKPFDESLMDTLESLAHRGYTEGFLRRHTHDEYQNYEYGYSISDRQQFVGEFTGKRNAEGMAEVAVKNKFLVGDSV
EMMTPKGNIVFKIERMLNRKNEQVEAGLGDGHFVFLDVPADIELDYALLMRNLVDSNTRNPHKA

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=456, Percent_Identity=80.0438596491228, Blast_Score=741, Evalue=0.0,
Organism=Escherichia coli, GI87081910, Length=416, Percent_Identity=27.1634615384615, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1789548, Length=347, Percent_Identity=28.8184438040346, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 52975; Mature: 52844

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELKYPKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHANLQIAIDEA
CCCCCCCCHHHCCCCHHHHCCEEEEEECCCEEEECCCCEEEEEECCCCCCCEEEEEEECH
HSLGKKFYVVVNIAPHNSKLKTFIKDLKVVVDMKPDALIMSDPGLIMLVRENFPEIDIHL
HCCCCEEEEEEEECCCCHHHHHHHHHHEEEEECCCCEEEEECCCEEEEEECCCCCEEEEE
SVQANAVNWATVKFWKQMGLTRVILSRELSLEEIEEIRQQVPDIELEIFVHGALCMAYSG
EEEECCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEHCCC
RCLLSGYINKRDPNQGTCTNACRWEYKMEEGTTDEVGNIVPQSAVQRYEPEIEVKNIAPT
CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHCCCCEEEECCCCC
LGEGSHTDKVFLYTEPNRPDEQMTAFEDEHGTYFMNSKDLRAVQHVERLTQMGVHSLKIE
CCCCCCCCEEEEEECCCCCHHHHHHEECCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEE
GRTKSFYYCARTAQVYRKAIDDAAAGKPFDESLMDTLESLAHRGYTEGFLRRHTHDEYQN
CCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCC
YEYGYSISDRQQFVGEFTGKRNAEGMAEVAVKNKFLVGDSVEMMTPKGNIVFKIERMLNR
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCEEEECCCEEEECCCCCEEEEEEHHHCC
KNEQVEAGLGDGHFVFLDVPADIELDYALLMRNLVDSNTRNPHKA
CCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SELKYPKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHANLQIAIDEA
CCCCCCCHHHCCCCHHHHCCEEEEEECCCEEEECCCCEEEEEECCCCCCCEEEEEEECH
HSLGKKFYVVVNIAPHNSKLKTFIKDLKVVVDMKPDALIMSDPGLIMLVRENFPEIDIHL
HCCCCEEEEEEEECCCCHHHHHHHHHHEEEEECCCCEEEEECCCEEEEEECCCCCEEEEE
SVQANAVNWATVKFWKQMGLTRVILSRELSLEEIEEIRQQVPDIELEIFVHGALCMAYSG
EEEECCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEHCCC
RCLLSGYINKRDPNQGTCTNACRWEYKMEEGTTDEVGNIVPQSAVQRYEPEIEVKNIAPT
CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHCCCCEEEECCCCC
LGEGSHTDKVFLYTEPNRPDEQMTAFEDEHGTYFMNSKDLRAVQHVERLTQMGVHSLKIE
CCCCCCCCEEEEEECCCCCHHHHHHEECCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEE
GRTKSFYYCARTAQVYRKAIDDAAAGKPFDESLMDTLESLAHRGYTEGFLRRHTHDEYQN
CCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCC
YEYGYSISDRQQFVGEFTGKRNAEGMAEVAVKNKFLVGDSVEMMTPKGNIVFKIERMLNR
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCEEEECCCEEEECCCCCEEEEEEHHHCC
KNEQVEAGLGDGHFVFLDVPADIELDYALLMRNLVDSNTRNPHKA
CCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]