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The map label for this gene is ytfJ [C]

Identifier: 126208537

GI number: 126208537

Start: 1233772

End: 1234332

Strand: Reverse

Name: ytfJ [C]

Synonym: APL_1065

Alternate gene names: 126208537

Gene position: 1234332-1233772 (Counterclockwise)

Preceding gene: 126208544

Following gene: 126208526

Centisome position: 54.27

GC content: 43.67

Gene sequence:

>561_bases
GTGAGAAAAATCACTCGACTAGCGGTCGTTTTCGGTTTGTTTTTTGTAAATTCCGCTTTTGCTCATCAAGTGCAACTTAA
TGCCGTTTTGCCCAAGGCGAATGTAAGTAAAGACGGTGAACTTGTGGCACAAGGTAAAACGGTGACTTATAAAGCGTGGG
CAAGTAGTAGCCTTGCCGGAAAAGTTCGCGTCGTTCATCATTTTGCCGGTAGAAGCTCGGCTAAAGAGAAGAATGAAGCG
TTAATTAATGCGATTAAGGCGGCAAATTTTGATCGCAGCAAATACCAAACGACTTCAATTATTAATGCCGATGATGCGAT
TGTAGCCACGGGTGCTTTTGTAAAGAGCAGCGCCGAAGACGGAAAATTGGAAAATCCGCATAGCCAAGTGGTATTGGATC
AAAACGGCAGCGTGAAAAATGCTTGGGGACTCAAATCGAAAGACAGTTTTATAGCGGTATTGGATAAAAGCGGCAAAGTA
CAATTTGTCGCAGAAGGCAAGCTATCGGCAGCGCAGATTCAGCAAGTAATTACGCTGGTTAATCGCCTTATCGTACAATA
A

Upstream 100 bases:

>100_bases
ATTTAACGAGAAGAAAATTTAATGCCATCGGGTTACTTTTAAAGTAAGATCACAATATTGCGCCTATTTTTCATAATTCA
ATTAATTTCAAGGAGAAATC

Downstream 100 bases:

>100_bases
ATAAAAAAGACGAAGCGGAAAACTTCGTCTTTTTCTCTTCGGCTTAATTAGAAAATAATTTCCGCTTTTAAACCGCCCAT
CTCGCTACGGCTAAGTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRKITRLAVVFGLFFVNSAFAHQVQLNAVLPKANVSKDGELVAQGKTVTYKAWASSSLAGKVRVVHHFAGRSSAKEKNEA
LINAIKAANFDRSKYQTTSIINADDAIVATGAFVKSSAEDGKLENPHSQVVLDQNGSVKNAWGLKSKDSFIAVLDKSGKV
QFVAEGKLSAAQIQQVITLVNRLIVQ

Sequences:

>Translated_186_residues
MRKITRLAVVFGLFFVNSAFAHQVQLNAVLPKANVSKDGELVAQGKTVTYKAWASSSLAGKVRVVHHFAGRSSAKEKNEA
LINAIKAANFDRSKYQTTSIINADDAIVATGAFVKSSAEDGKLENPHSQVVLDQNGSVKNAWGLKSKDSFIAVLDKSGKV
QFVAEGKLSAAQIQQVITLVNRLIVQ
>Mature_186_residues
MRKITRLAVVFGLFFVNSAFAHQVQLNAVLPKANVSKDGELVAQGKTVTYKAWASSSLAGKVRVVHHFAGRSSAKEKNEA
LINAIKAANFDRSKYQTTSIINADDAIVATGAFVKSSAEDGKLENPHSQVVLDQNGSVKNAWGLKSKDSFIAVLDKSGKV
QFVAEGKLSAAQIQQVITLVNRLIVQ

Specific function: Unknown

COG id: COG3054

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfJ [H]

Homologues:

Organism=Escherichia coli, GI1790662, Length=184, Percent_Identity=44.0217391304348, Blast_Score=160, Evalue=6e-41,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006513 [H]

Pfam domain/function: PF09695 YtfJ_HI0045 [H]

EC number: NA

Molecular weight: Translated: 20009; Mature: 20009

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKITRLAVVFGLFFVNSAFAHQVQLNAVLPKANVSKDGELVAQGKTVTYKAWASSSLAG
CCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCCC
KVRVVHHFAGRSSAKEKNEALINAIKAANFDRSKYQTTSIINADDAIVATGAFVKSSAED
CEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECHHHCCCCCC
GKLENPHSQVVLDQNGSVKNAWGLKSKDSFIAVLDKSGKVQFVAEGKLSAAQIQQVITLV
CCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHH
NRLIVQ
HHHHCC
>Mature Secondary Structure
MRKITRLAVVFGLFFVNSAFAHQVQLNAVLPKANVSKDGELVAQGKTVTYKAWASSSLAG
CCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCCC
KVRVVHHFAGRSSAKEKNEALINAIKAANFDRSKYQTTSIINADDAIVATGAFVKSSAED
CEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECHHHCCCCCC
GKLENPHSQVVLDQNGSVKNAWGLKSKDSFIAVLDKSGKVQFVAEGKLSAAQIQQVITLV
CCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHH
NRLIVQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]