| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208503
Identifier: 126208503
GI number: 126208503
Start: 1193165
End: 1194310
Strand: Reverse
Name: 126208503
Synonym: APL_1029
Alternate gene names: NA
Gene position: 1194310-1193165 (Counterclockwise)
Preceding gene: 126208504
Following gene: 126208502
Centisome position: 52.51
GC content: 38.13
Gene sequence:
>1146_bases ATGGGGCTTACCATGGTAAGTTCTTTTATTTTGGCGCATATGCTCTCGGTACAAGATCGCGGTACTCATCAGTTGTTTAT TACCGCCGTTTCTTATGTCGTTACGATTGCAACCGGCGGGGTTGGGTTTGCATTAGCACTTTCCATGCGTAATAAACAAT ATTTGCATTGGAAACGTTATTTTATTGCCTTTCTTGCTTTTGCCGTGATTGTGGCGAATGTTGCAATGCTACTATTTGAT TTTACCGCTTACGATGGACTTTTTATCATTAATGTCGTGCTGACGGCAATTCTGACAATGACCTTGGAGAAAAGTAAAAT TGATCCGAAGATGAAAGTTTATCGTATCTTAACTTTGCAGCAACCGATTTTATTAGTTGCGATTTACGGCTCGGCTTATT GGTTGTTCGGCGAGCAGGAATTTAAGGTCGTACTTTATCTTTTAACCTTATTCAGTTCCATTCAAGCGATCGCTTGTTTG TTTTATCTGGCAAAAATCGATAAATCCTTTAAAAATAAGAATGAAGTCAGTGAAATTGATCGTAAGTTTTTCCTAAAAAC TTGGGGAAAACAAAATTTATTACAAATTTTCGGCGCTACCACTTCAAGCTTGGATAAATTTTTGATTATGGCGTTTATGG GTAATTACGTACTCGGGCTTTATACGGTATGTATCGCTTTCGATTCGCTGATGACTAAATTTATCAATATGTTGGCGGAT TACTATTATTCGGGATTATTGAATAATTTAAACCGCATTAAAGCGGTATTGGCGGTTGTTGCCTTAATGAGTGTCGGCGC AATTGTGTTAGTACCGTTACTTGCCGAGCCGGTAATTAGCTTTTTCTTTAGTAGTAAATATGTTGAAGTGGCGGACGTAT TGATTTGGTTTATTATCAATTCTATCTTAGCCGGGCTTTCTTGGATTCTCTCGCAAAATATGTTGCTGTTAGGCAAACAG GTCTTGTTGTTTACCCGCCAAATTCTGTCGATTGCGGTCTTTGTCGGATTATTCTATTTACTGCGTGATGAGCAGTTATA TGGTGTGGCGTATGCCTTTATCGGCGGTAGCTTAACACGTCTGATAATTTCAATTATTTACTACTTTAAATACCCTGTAA TACAAACTACGGTAGAACCAAAATGA
Upstream 100 bases:
>100_bases ACCGGTTATTACAACCAATGGACAAAAGATATTGATTATGCCAAAACCTATCAACATTAGCGGTAATCTGGTTAAACTGA TTGCGGTAACCGTCTTGAGT
Downstream 100 bases:
>100_bases AAAAATTTCTTATCTCTCTCGATAAAGACGCACAACGCAGAGAGCTTTTCTTTTCCCAAGCGGATACGGCCGACTTTACG GTATTTAGTGCAATTAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MGLTMVSSFILAHMLSVQDRGTHQLFITAVSYVVTIATGGVGFALALSMRNKQYLHWKRYFIAFLAFAVIVANVAMLLFD FTAYDGLFIINVVLTAILTMTLEKSKIDPKMKVYRILTLQQPILLVAIYGSAYWLFGEQEFKVVLYLLTLFSSIQAIACL FYLAKIDKSFKNKNEVSEIDRKFFLKTWGKQNLLQIFGATTSSLDKFLIMAFMGNYVLGLYTVCIAFDSLMTKFINMLAD YYYSGLLNNLNRIKAVLAVVALMSVGAIVLVPLLAEPVISFFFSSKYVEVADVLIWFIINSILAGLSWILSQNMLLLGKQ VLLFTRQILSIAVFVGLFYLLRDEQLYGVAYAFIGGSLTRLIISIIYYFKYPVIQTTVEPK
Sequences:
>Translated_381_residues MGLTMVSSFILAHMLSVQDRGTHQLFITAVSYVVTIATGGVGFALALSMRNKQYLHWKRYFIAFLAFAVIVANVAMLLFD FTAYDGLFIINVVLTAILTMTLEKSKIDPKMKVYRILTLQQPILLVAIYGSAYWLFGEQEFKVVLYLLTLFSSIQAIACL FYLAKIDKSFKNKNEVSEIDRKFFLKTWGKQNLLQIFGATTSSLDKFLIMAFMGNYVLGLYTVCIAFDSLMTKFINMLAD YYYSGLLNNLNRIKAVLAVVALMSVGAIVLVPLLAEPVISFFFSSKYVEVADVLIWFIINSILAGLSWILSQNMLLLGKQ VLLFTRQILSIAVFVGLFYLLRDEQLYGVAYAFIGGSLTRLIISIIYYFKYPVIQTTVEPK >Mature_380_residues GLTMVSSFILAHMLSVQDRGTHQLFITAVSYVVTIATGGVGFALALSMRNKQYLHWKRYFIAFLAFAVIVANVAMLLFDF TAYDGLFIINVVLTAILTMTLEKSKIDPKMKVYRILTLQQPILLVAIYGSAYWLFGEQEFKVVLYLLTLFSSIQAIACLF YLAKIDKSFKNKNEVSEIDRKFFLKTWGKQNLLQIFGATTSSLDKFLIMAFMGNYVLGLYTVCIAFDSLMTKFINMLADY YYSGLLNNLNRIKAVLAVVALMSVGAIVLVPLLAEPVISFFFSSKYVEVADVLIWFIINSILAGLSWILSQNMLLLGKQV LLFTRQILSIAVFVGLFYLLRDEQLYGVAYAFIGGSLTRLIISIIYYFKYPVIQTTVEPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43051; Mature: 42920
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTMVSSFILAHMLSVQDRGTHQLFITAVSYVVTIATGGVGFALALSMRNKQYLHWKRY CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH FIAFLAFAVIVANVAMLLFDFTAYDGLFIINVVLTAILTMTLEKSKIDPKMKVYRILTLQ HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC QPILLVAIYGSAYWLFGEQEFKVVLYLLTLFSSIQAIACLFYLAKIDKSFKNKNEVSEID CCHHEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RKFFLKTWGKQNLLQIFGATTSSLDKFLIMAFMGNYVLGLYTVCIAFDSLMTKFINMLAD HHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYYSGLLNNLNRIKAVLAVVALMSVGAIVLVPLLAEPVISFFFSSKYVEVADVLIWFIIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SILAGLSWILSQNMLLLGKQVLLFTRQILSIAVFVGLFYLLRDEQLYGVAYAFIGGSLTR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LIISIIYYFKYPVIQTTVEPK HHHHHHHHHHCCHHEECCCCC >Mature Secondary Structure GLTMVSSFILAHMLSVQDRGTHQLFITAVSYVVTIATGGVGFALALSMRNKQYLHWKRY CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH FIAFLAFAVIVANVAMLLFDFTAYDGLFIINVVLTAILTMTLEKSKIDPKMKVYRILTLQ HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC QPILLVAIYGSAYWLFGEQEFKVVLYLLTLFSSIQAIACLFYLAKIDKSFKNKNEVSEID CCHHEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RKFFLKTWGKQNLLQIFGATTSSLDKFLIMAFMGNYVLGLYTVCIAFDSLMTKFINMLAD HHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYYSGLLNNLNRIKAVLAVVALMSVGAIVLVPLLAEPVISFFFSSKYVEVADVLIWFIIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SILAGLSWILSQNMLLLGKQVLLFTRQILSIAVFVGLFYLLRDEQLYGVAYAFIGGSLTR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LIISIIYYFKYPVIQTTVEPK HHHHHHHHHHCCHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA