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The map label for this gene is lsgF

Identifier: 126208499

GI number: 126208499

Start: 1189524

End: 1190324

Strand: Reverse

Name: lsgF

Synonym: APL_1025

Alternate gene names: NA

Gene position: 1190324-1189524 (Counterclockwise)

Preceding gene: 126208500

Following gene: 126208494

Centisome position: 52.33

GC content: 40.7

Gene sequence:

>801_bases
ATGAAATTCTCTGTTTTAATGTCTTTGTATATCAAAGAAAACCCGCAGTTTTTAAGAGAATGTTTTGAAAGCTTAAAAGC
ACAAACTCGACCTGCCGATGAAATTGTCGTGTTGTTTGACGGTAAAGTCACACCGGAATTAGATGCGATCGTAGTGGAAT
ACGAACAACAGCTTCCGATTAAAGCGGTGCGTTTTGAGCAAAATCGCGGTTTAGGTAAAACCCTGAACGACGGCTTAAAT
TATTGTTCGCACGAATGGGTGTTCCGTATGGATACCGATGATATTTGTTTACCGGAACGTTTTGAAAAACAGGTGGCTTT
TATCGAGCAAAATCCGGATACGATTATTTTTGGCGGACAAATTGCCGAGTTCGGTCAAAATATTCAAGATATTGTCGCTT
ACCGAAATGTGCCGACCAAGGCGGAAGAAATTGTGAAATTTACTCGCTTGCGTTGCCCGTTTAACCATATGACGGTTGCT
TATAAAAAATCCGCAGTGCAAGCATGCGGCGGTTATCAAGATTTACAAGAAGACTATAATCTTTGGGTAAAAATGGTAGC
TAACGGCAATAACGTGGCGAATTTAGCCGATTTATTAGTCTATGCTCGAGTAGGCAACGGCATGGTAAGCCGTCGTCACG
GTTGGAATTATTTCAAAAGCGAATGGCGTTTAATGAAGCTGAAAAACGAATGTAAAATTCATGATCCTTTAACCGGATTC
GTCATTTTCTTAATGCGAGGTTTGCCGAGAATTTTACCGCTTGCCGCCCTTAAAGCGATTTACGGTTTAATGCGTAAATA
A

Upstream 100 bases:

>100_bases
TGCAAATGTTCAAACGTAGCCATAGCTTAAAACATTTAATTATCGCAATGGTTACATTTATCTCGCCAAAATTGGCAATT
AATATGAAAAGGTTTATTTA

Downstream 100 bases:

>100_bases
TAAAAAGGCGTATCCAATGATACGCCTTAATTTTTTATTGATTACGTAGAATCTCGTTCATTAATTGCAAATCAATATGG
CAATAGCCATTCGGATTCTT

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKFSVLMSLYIKENPQFLRECFESLKAQTRPADEIVVLFDGKVTPELDAIVVEYEQQLPIKAVRFEQNRGLGKTLNDGLN
YCSHEWVFRMDTDDICLPERFEKQVAFIEQNPDTIIFGGQIAEFGQNIQDIVAYRNVPTKAEEIVKFTRLRCPFNHMTVA
YKKSAVQACGGYQDLQEDYNLWVKMVANGNNVANLADLLVYARVGNGMVSRRHGWNYFKSEWRLMKLKNECKIHDPLTGF
VIFLMRGLPRILPLAALKAIYGLMRK

Sequences:

>Translated_266_residues
MKFSVLMSLYIKENPQFLRECFESLKAQTRPADEIVVLFDGKVTPELDAIVVEYEQQLPIKAVRFEQNRGLGKTLNDGLN
YCSHEWVFRMDTDDICLPERFEKQVAFIEQNPDTIIFGGQIAEFGQNIQDIVAYRNVPTKAEEIVKFTRLRCPFNHMTVA
YKKSAVQACGGYQDLQEDYNLWVKMVANGNNVANLADLLVYARVGNGMVSRRHGWNYFKSEWRLMKLKNECKIHDPLTGF
VIFLMRGLPRILPLAALKAIYGLMRK
>Mature_266_residues
MKFSVLMSLYIKENPQFLRECFESLKAQTRPADEIVVLFDGKVTPELDAIVVEYEQQLPIKAVRFEQNRGLGKTLNDGLN
YCSHEWVFRMDTDDICLPERFEKQVAFIEQNPDTIIFGGQIAEFGQNIQDIVAYRNVPTKAEEIVKFTRLRCPFNHMTVA
YKKSAVQACGGYQDLQEDYNLWVKMVANGNNVANLADLLVYARVGNGMVSRRHGWNYFKSEWRLMKLKNECKIHDPLTGF
VIFLMRGLPRILPLAALKAIYGLMRK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 30683; Mature: 30683

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSVLMSLYIKENPQFLRECFESLKAQTRPADEIVVLFDGKVTPELDAIVVEYEQQLPI
CCHHHEEHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHEEEHHHCCCE
KAVRFEQNRGLGKTLNDGLNYCSHEWVFRMDTDDICLPERFEKQVAFIEQNPDTIIFGGQ
EEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHEECCCCEEEECCC
IAEFGQNIQDIVAYRNVPTKAEEIVKFTRLRCPFNHMTVAYKKSAVQACGGYQDLQEDYN
HHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
LWVKMVANGNNVANLADLLVYARVGNGMVSRRHGWNYFKSEWRLMKLKNECKIHDPLTGF
EEEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHEEHHCCCCCCCCHHHH
VIFLMRGLPRILPLAALKAIYGLMRK
HHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFSVLMSLYIKENPQFLRECFESLKAQTRPADEIVVLFDGKVTPELDAIVVEYEQQLPI
CCHHHEEHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHEEEHHHCCCE
KAVRFEQNRGLGKTLNDGLNYCSHEWVFRMDTDDICLPERFEKQVAFIEQNPDTIIFGGQ
EEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHEECCCCEEEECCC
IAEFGQNIQDIVAYRNVPTKAEEIVKFTRLRCPFNHMTVAYKKSAVQACGGYQDLQEDYN
HHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
LWVKMVANGNNVANLADLLVYARVGNGMVSRRHGWNYFKSEWRLMKLKNECKIHDPLTGF
EEEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHEEHHCCCCCCCCHHHH
VIFLMRGLPRILPLAALKAIYGLMRK
HHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]