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The map label for this gene is lbgA

Identifier: 126208454

GI number: 126208454

Start: 1133736

End: 1134377

Strand: Reverse

Name: lbgA

Synonym: APL_0980

Alternate gene names: NA

Gene position: 1134377-1133736 (Counterclockwise)

Preceding gene: 126208456

Following gene: 126208453

Centisome position: 49.87

GC content: 35.98

Gene sequence:

>642_bases
ATGATAGATGATAAAATGCCTATTCCGCCTATTTTTGTTATTAGCTTAGCTAATTCTGTTAGGCGTAAAATAATTTCTGC
TCGACTTAACAGTTTAGGATTAGCGTTTGAGTTTATTGATGCAGTAAATGGGCGAGATTTAACAGAAGAACAACTTTCTC
AAGTTGATTATGATTTTTACCCTCAGCGTTTTGGAGGGAAACATAGACTGAAGCTGGGTGAAATTGGTTGTGCGATGAGT
CATATTAGGGCTTATCAGCACCTTGTGGATAATAATATTAAAGAAGCAATCATTTTAGAAGATGATGCGATAGTTTCTCA
CTATTTCAGACGTATTGTTGCAGATGTATTACGTAAAGTGCCAAGTAGAAAACAGATTATATTTTTTGACCACGGAAAAG
CCAAATATTGGCCGATAACACGTCCACTTAAAGAAGGTTATAAATTAGTACGTTATCGCTACCCGTCAAAAAATTCTAAA
CGCATTATTATGATTGCCACAGGATATTATTTAACATTAGAGGGGGCGAAACTATTACTTAATCATGCTTACCCCCTACG
AATGCCAGCTGATTTTCTAACCGGTGCAATTCAAATGACAGGAATTAAAGCGTATGGCGTTGAGCCTCCTTATTTTTATT
AG

Upstream 100 bases:

>100_bases
TTCTCCTTTATATGACGAATATAACATATTTCAAAGCTTGAATAATTAGCTTTTTTCCGTAAAATCCATGCGCACATTAA
TGGATGTATAAGAGAACTCT

Downstream 100 bases:

>100_bases
TCCCGGCTCGGAAATCGATGAAATAGAAAAGCGTGGTTAAAATGAGTAAGCTAACATTAAAACAAAAGCTTCGAAGAATC
AGGCTCAAATTAGGTAAATT

Product: putative LPS biosynthesis protein

Products: NA

Alternate protein names: Lipooligosaccharide Galactosyltransferase I; LPS Biosynthesis Glycosyltransferase; Beta1 4-Galactosyltransferase Waax; LPS Biosynthesis Protein; Glycosyl Transferase Family; Lipooligosaccharide Biosynthesis Protein LpsA; Beta1 4-Galactosyltransferase; Lacto-N-Neotetraose Biosynthesis Glycosyltransferase LgtB; Lex2B Protein; Glycosyltransferase Involved In LPS Biosynthesis; Glycosyltransferase; Glycosyl Transferase

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MIDDKMPIPPIFVISLANSVRRKIISARLNSLGLAFEFIDAVNGRDLTEEQLSQVDYDFYPQRFGGKHRLKLGEIGCAMS
HIRAYQHLVDNNIKEAIILEDDAIVSHYFRRIVADVLRKVPSRKQIIFFDHGKAKYWPITRPLKEGYKLVRYRYPSKNSK
RIIMIATGYYLTLEGAKLLLNHAYPLRMPADFLTGAIQMTGIKAYGVEPPYFY

Sequences:

>Translated_213_residues
MIDDKMPIPPIFVISLANSVRRKIISARLNSLGLAFEFIDAVNGRDLTEEQLSQVDYDFYPQRFGGKHRLKLGEIGCAMS
HIRAYQHLVDNNIKEAIILEDDAIVSHYFRRIVADVLRKVPSRKQIIFFDHGKAKYWPITRPLKEGYKLVRYRYPSKNSK
RIIMIATGYYLTLEGAKLLLNHAYPLRMPADFLTGAIQMTGIKAYGVEPPYFY
>Mature_213_residues
MIDDKMPIPPIFVISLANSVRRKIISARLNSLGLAFEFIDAVNGRDLTEEQLSQVDYDFYPQRFGGKHRLKLGEIGCAMS
HIRAYQHLVDNNIKEAIILEDDAIVSHYFRRIVADVLRKVPSRKQIIFFDHGKAKYWPITRPLKEGYKLVRYRYPSKNSK
RIIMIATGYYLTLEGAKLLLNHAYPLRMPADFLTGAIQMTGIKAYGVEPPYFY

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24581946, Length=180, Percent_Identity=28.8888888888889, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24571; Mature: 24571

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDDKMPIPPIFVISLANSVRRKIISARLNSLGLAFEFIDAVNGRDLTEEQLSQVDYDFY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
PQRFGGKHRLKLGEIGCAMSHIRAYQHLVDNNIKEAIILEDDAIVSHYFRRIVADVLRKV
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHC
PSRKQIIFFDHGKAKYWPITRPLKEGYKLVRYRYPSKNSKRIIMIATGYYLTLEGAKLLL
CCCCEEEEEECCCCEECCCCCCHHHHHHEEEEECCCCCCCEEEEEECCEEEEECCHHEEH
NHAYPLRMPADFLTGAIQMTGIKAYGVEPPYFY
HCCCCCCCCHHHHHHHHHEECEEEECCCCCCCC
>Mature Secondary Structure
MIDDKMPIPPIFVISLANSVRRKIISARLNSLGLAFEFIDAVNGRDLTEEQLSQVDYDFY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
PQRFGGKHRLKLGEIGCAMSHIRAYQHLVDNNIKEAIILEDDAIVSHYFRRIVADVLRKV
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHC
PSRKQIIFFDHGKAKYWPITRPLKEGYKLVRYRYPSKNSKRIIMIATGYYLTLEGAKLLL
CCCCEEEEEECCCCEECCCCCCHHHHHHEEEEECCCCCCCEEEEEECCEEEEECCHHEEH
NHAYPLRMPADFLTGAIQMTGIKAYGVEPPYFY
HCCCCCCCCHHHHHHHHHEECEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA