| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208430
Identifier: 126208430
GI number: 126208430
Start: 1094550
End: 1094939
Strand: Reverse
Name: 126208430
Synonym: APL_0954
Alternate gene names: NA
Gene position: 1094939-1094550 (Counterclockwise)
Preceding gene: 126208431
Following gene: 126208427
Centisome position: 48.14
GC content: 34.87
Gene sequence:
>390_bases ATGGAAGAAATTTCACTCGCAGAACAAGAAAGAAATGAATGTGAAGCAAAGATAAAGGGATTAAATCAGAAAATTTTAGA CTATCGAACCGCCTTGAACCACGCAAGGGATTCAGATTTTTCATTAAGCAAGAAAGTTCGAAATAGCCGCTTTCAGTCAT CACCACGTCAATTAGTGGCACATATTCTTAAAAAACAACCTGAAAAATGGTTTCATACAAATGAGATTACGCTTCAAGCA TTGAAATTAGATAATCAATCTATTGATAACGGTGCGCCACGTTTACATTTACAAACCATTCACAGTACACTAAATCATCT TGTTAAGCATTCATTAGTTGAGAAAAAGCTAGAAGGTAAAACGTGTTATTGGCGTTTGAAGGCAATTTAG
Upstream 100 bases:
>100_bases CAGTTGCACAAAGATTTAATTTAGTGTTTCTGCTACATTTTTTCTTGCTCTCATTGTAATTTAAAGGTAAGAAAAAATGA ATGCATTAGAAAAGTTATTA
Downstream 100 bases:
>100_bases TTATATTTTCAATTTCCACCGCACATCATTTGCCTTTAATGCTACTCGTTCTACCACACCTTTATTAAGCCAGTGTTTCA ATGCACCACGCACGGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MEEISLAEQERNECEAKIKGLNQKILDYRTALNHARDSDFSLSKKVRNSRFQSSPRQLVAHILKKQPEKWFHTNEITLQA LKLDNQSIDNGAPRLHLQTIHSTLNHLVKHSLVEKKLEGKTCYWRLKAI
Sequences:
>Translated_129_residues MEEISLAEQERNECEAKIKGLNQKILDYRTALNHARDSDFSLSKKVRNSRFQSSPRQLVAHILKKQPEKWFHTNEITLQA LKLDNQSIDNGAPRLHLQTIHSTLNHLVKHSLVEKKLEGKTCYWRLKAI >Mature_129_residues MEEISLAEQERNECEAKIKGLNQKILDYRTALNHARDSDFSLSKKVRNSRFQSSPRQLVAHILKKQPEKWFHTNEITLQA LKLDNQSIDNGAPRLHLQTIHSTLNHLVKHSLVEKKLEGKTCYWRLKAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15038; Mature: 15038
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEISLAEQERNECEAKIKGLNQKILDYRTALNHARDSDFSLSKKVRNSRFQSSPRQLVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH HILKKQPEKWFHTNEITLQALKLDNQSIDNGAPRLHLQTIHSTLNHLVKHSLVEKKLEGK HHHHHCCHHHCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TCYWRLKAI CEEEEEECC >Mature Secondary Structure MEEISLAEQERNECEAKIKGLNQKILDYRTALNHARDSDFSLSKKVRNSRFQSSPRQLVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH HILKKQPEKWFHTNEITLQALKLDNQSIDNGAPRLHLQTIHSTLNHLVKHSLVEKKLEGK HHHHHCCHHHCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TCYWRLKAI CEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA